Strain Fitness in Sphingobium sp. HT1-2 around GFF5030

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
5,021,353	+		GFF5029	0.14	+0.2
5,021,374	+		GFF5029	0.17	+0.5
5,021,388	-		GFF5029	0.18	-0.6
5,021,447	+		GFF5029	0.24	-0.3
5,021,448	+		GFF5029	0.24	-1.2
5,021,523	-		GFF5029	0.31	+0.1
5,021,524	+		GFF5029	0.31	-0.0
5,021,524	+		GFF5029	0.31	+0.1
5,021,532	-		GFF5029	0.32	+0.2
5,021,532	-		GFF5029	0.32	-2.0
5,021,534	+		GFF5029	0.32	-0.5
5,021,534	+		GFF5029	0.32	-0.5
5,021,542	-		GFF5029	0.33	-2.1
5,021,544	+		GFF5029	0.33	-0.0
5,021,547	-		GFF5029	0.34	-0.2
5,021,547	-		GFF5029	0.34	+0.3
5,021,552	-		GFF5029	0.34	-0.6
5,021,552	-		GFF5029	0.34	+0.8
5,021,552	-		GFF5029	0.34	-2.0
5,021,557	-		GFF5029	0.35	+0.4
5,021,557	-		GFF5029	0.35	-0.1
5,021,562	+		GFF5029	0.35	-0.4
5,021,594	-		GFF5029	0.38	+0.5
5,021,612	+		GFF5029	0.40	-0.2
5,021,612	+		GFF5029	0.40	+0.2
5,021,620	-		GFF5029	0.41	+0.1
5,021,626	+		GFF5029	0.42	-2.5
5,021,634	-		GFF5029	0.42	+0.8
5,021,644	+		GFF5029	0.43	+0.3
5,021,665	-		GFF5029	0.45	-0.7
5,021,667	+		GFF5029	0.46	-1.3
5,021,667	+		GFF5029	0.46	-0.4
5,021,675	-		GFF5029	0.46	-0.4
5,021,675	-		GFF5029	0.46	+0.6
5,021,730	-		GFF5029	0.52	+0.9
5,021,744	+		GFF5029	0.53	+0.1
5,021,747	-		GFF5029	0.54	+0.9
5,021,759	+		GFF5029	0.55	-0.5
5,021,767	-		GFF5029	0.56	-0.0
5,021,767	-		GFF5029	0.56	-2.5
5,021,767	-		GFF5029	0.56	+0.8
5,021,767	-		GFF5029	0.56	-0.3
5,021,767	-		GFF5029	0.56	-1.0
5,021,795	+		GFF5029	0.58	-0.4
5,021,799	-		GFF5029	0.59	-2.2
5,021,803	+		GFF5029	0.59	-0.4
5,021,806	+		GFF5029	0.59	-0.9
5,021,808	+		GFF5029	0.60	-0.7
5,021,809	-		GFF5029	0.60	+0.5
5,021,816	-		GFF5029	0.60	+0.1
5,021,816	-		GFF5029	0.60	-3.4
5,021,848	+		GFF5029	0.64	-0.1
5,021,854	+		GFF5029	0.64	-0.1
5,021,855	+		GFF5029	0.64	+1.2
5,021,855	+		GFF5029	0.64	-1.4
5,021,856	-		GFF5029	0.64	+1.0
5,021,863	-		GFF5029	0.65	-0.4
5,021,930	+		GFF5029	0.72	-1.2
5,021,933	-		GFF5029	0.72	-0.1
5,021,941	+		GFF5029	0.73	+1.1
5,021,966	+		GFF5029	0.75	+1.2
5,021,974	-		GFF5029	0.76	-0.1
5,021,974	-		GFF5029	0.76	+0.9
5,021,974	-		GFF5029	0.76	+1.5
5,021,974	-		GFF5029	0.76	-1.6
5,021,974	-		GFF5029	0.76	-0.1
5,021,976	+		GFF5029	0.76	-0.2
5,021,976	+		GFF5029	0.76	-0.2
5,021,976	-		GFF5029	0.76	-0.3
5,021,984	-		GFF5029	0.77	-0.2
5,021,989	-		GFF5029	0.78	-0.3
5,022,027	-		GFF5029	0.81	-0.6
5,022,043	+		GFF5029	0.83	-0.5
5,022,046	-		GFF5029	0.83	+0.7
5,022,061	-		GFF5029	0.85	-0.0
5,022,064	+		GFF5029	0.85	-0.2
5,022,070	+		GFF5029	0.86	-0.3
5,022,071	-		GFF5029	0.86	-0.2
5,022,085	+		GFF5029	0.87	-0.7
5,022,085	+		GFF5029	0.87	-1.4
5,022,085	+		GFF5029	0.87	-2.1
5,022,087	+		GFF5029	0.87	-0.0
5,022,093	-		GFF5029	0.88	-0.2
5,022,093	-		GFF5029	0.88	-3.1
5,022,093	-		GFF5029	0.88	+1.1
5,022,093	-		GFF5029	0.88	-0.5
5,022,093	-		GFF5029	0.88	-0.4
5,022,117	-				+1.6
5,022,121	-				+0.4
5,022,129	-				+1.0
5,022,148	+				-1.9
5,022,148	-				-1.6
5,022,156	-				-0.3
5,022,167	+				-1.5
5,022,238	+				+0.5
5,022,254	+				-0.3
5,022,254	+				+1.3
5,022,262	-				-0.1
5,022,262	-				-0.8
5,022,337	+				-0.1
5,022,345	-				+1.5
5,022,355	+				+0.4
5,022,384	+				-2.5
5,022,384	+				-3.1
5,022,384	+				-1.3
5,022,384	+				+0.5
5,022,392	-				-0.9
5,022,392	-				+0.6
5,022,412	+				+0.4
5,022,422	+				+0.5
5,022,427	+				-1.6
5,022,431	+				+1.0
5,022,431	+				+0.5
5,022,431	+				+0.1
5,022,431	+				-0.1
5,022,431	+				+0.4
5,022,431	+				-2.0
5,022,439	-				+1.1
5,022,439	-				-0.5
5,022,478	+				-0.1
5,022,478	+				-1.1
5,022,478	+				+0.8
5,022,478	+				+0.1
5,022,478	+				+0.5
5,022,478	+				-1.9
5,022,478	+				-0.4
5,022,478	+				-0.5
5,022,478	+				-0.6
5,022,478	+				-0.0
5,022,478	+				+0.2
5,022,478	+				-0.9
5,022,478	+				-0.9
5,022,478	+				-0.1
5,022,478	+				-0.5
5,022,478	+				+0.5
5,022,478	+				-0.7
5,022,478	+				-0.6
5,022,478	+				+1.0
5,022,478	+				+0.1
5,022,478	+				-2.0
5,022,478	+				-1.0
5,022,478	+				-0.8
5,022,483	+				+0.2
5,022,483	+				+0.6
5,022,486	-				+0.9
5,022,486	-				+0.6
5,022,486	-				+0.3
5,022,486	-				+0.6
5,022,486	-				-1.6
5,022,486	-				+1.2
5,022,486	-				+1.1
5,022,486	-				-0.0
5,022,486	-				+1.6
5,022,486	-				-0.6
5,022,486	-				-0.5
5,022,486	-				-1.3
5,022,486	-				-0.2
5,022,486	-				+1.5
5,022,486	-				-2.3
5,022,486	-				-0.2
5,022,486	-				+1.2
5,022,486	-				-0.4
5,022,486	-				+1.3
5,022,486	-				-0.3
5,022,486	-				-0.3
5,022,486	-				-2.4
5,022,486	-				+0.7
5,022,486	-				-0.0
5,022,486	-				-0.3
5,022,486	-				+0.5
5,022,488	+				+0.3
5,022,488	+				+0.5
5,022,496	-				+0.8
5,022,496	-				+0.6
5,022,496	-				-0.5
5,022,500	+				+0.2
5,022,508	-				+0.2
5,022,520	-				+1.5
5,022,531	-				+0.3
5,022,547	+				+0.5
5,022,553	+				+0.6
5,022,553	+				-0.4
5,022,553	+				+0.9
5,022,555	-				+0.3
5,022,557	+				-0.7
5,022,561	-				-0.9
5,022,563	+				+0.1
5,022,563	+				-0.7
5,022,566	-				-1.5
5,022,571	-				+0.2
5,022,574	-				+0.3
5,022,578	-				+1.0
5,022,578	-				-0.1
5,022,578	-				+0.2
5,022,592	+				+0.3
5,022,597	+				+0.1
5,022,599	+		GFF5030	0.10	-0.4
5,022,606	-		GFF5030	0.10	-0.8
5,022,623	+		GFF5030	0.11	-0.9
5,022,628	+		GFF5030	0.11	-0.2
5,022,628	+		GFF5030	0.11	+0.2
5,022,628	+		GFF5030	0.11	-0.3
5,022,631	-		GFF5030	0.11	-0.8
5,022,636	-		GFF5030	0.12	-0.9
5,022,636	-		GFF5030	0.12	-0.7
5,022,636	-		GFF5030	0.12	+1.0
5,022,636	-		GFF5030	0.12	+1.6
5,022,636	-		GFF5030	0.12	+1.2
5,022,679	+		GFF5030	0.13	+1.8
5,022,685	+		GFF5030	0.13	+1.5
5,022,687	-		GFF5030	0.14	-2.0
5,022,780	-		GFF5030	0.17	+0.0
5,022,805	-		GFF5030	0.18	+0.9
5,022,819	+		GFF5030	0.19	+0.6
5,022,832	-		GFF5030	0.19	-1.7
5,022,833	-		GFF5030	0.19	+0.8
5,022,833	-		GFF5030	0.19	-1.2
5,022,847	+		GFF5030	0.20	-0.2
5,022,854	+		GFF5030	0.20	-0.8
5,022,859	+		GFF5030	0.20	+1.2
5,022,875	-		GFF5030	0.21	-1.4
5,022,885	+		GFF5030	0.21	-0.1
5,022,893	-		GFF5030	0.22	+1.0
5,022,893	-		GFF5030	0.22	+0.9
5,022,893	-		GFF5030	0.22	+0.8
5,022,895	+		GFF5030	0.22	+1.3
5,022,899	-		GFF5030	0.22	+1.1
5,022,904	-		GFF5030	0.22	-0.6
5,022,906	+		GFF5030	0.22	-0.7
5,022,906	+		GFF5030	0.22	+0.6
5,022,917	+		GFF5030	0.23	-1.0
5,022,920	-		GFF5030	0.23	+0.7
5,022,931	-		GFF5030	0.23	-1.1
5,022,940	-		GFF5030	0.24	+0.7
5,022,940	-		GFF5030	0.24	+0.2
5,022,947	+		GFF5030	0.24	-0.3
5,022,950	-		GFF5030	0.24	+1.9
5,022,967	+		GFF5030	0.25	+0.7
5,022,967	+		GFF5030	0.25	+0.4
5,022,967	+		GFF5030	0.25	+0.0
5,022,967	+		GFF5030	0.25	+0.1
5,022,970	-		GFF5030	0.25	-0.1
5,022,970	-		GFF5030	0.25	-2.4
5,022,975	-		GFF5030	0.25	+1.7
5,022,995	+		GFF5030	0.26	-0.4
5,023,039	+		GFF5030	0.28	+0.1
5,023,039	+		GFF5030	0.28	+1.0
5,023,039	+		GFF5030	0.28	+0.8
5,023,039	+		GFF5030	0.28	+0.5
5,023,039	+		GFF5030	0.28	+2.0
5,023,039	+		GFF5030	0.28	-1.1
5,023,047	-		GFF5030	0.28	+0.6
5,023,047	-		GFF5030	0.28	+0.9
5,023,047	-		GFF5030	0.28	-0.2
5,023,047	-		GFF5030	0.28	-0.1
5,023,047	-		GFF5030	0.28	+0.2
5,023,047	-		GFF5030	0.28	-0.7
5,023,047	-		GFF5030	0.28	+1.1
5,023,047	-		GFF5030	0.28	-1.8
5,023,047	-		GFF5030	0.28	-0.1
5,023,047	-		GFF5030	0.28	-0.8
5,023,047	-		GFF5030	0.28	+0.6
5,023,047	-		GFF5030	0.28	+0.8
5,023,060	+		GFF5030	0.28	+0.7
5,023,062	+		GFF5030	0.29	-1.4
5,023,062	+		GFF5030	0.29	-1.2
5,023,062	+		GFF5030	0.29	+1.6
5,023,068	-		GFF5030	0.29	-0.1
5,023,069	+		GFF5030	0.29	+1.2
5,023,070	+		GFF5030	0.29	+1.4
5,023,070	-		GFF5030	0.29	-1.0
5,023,076	-		GFF5030	0.29	+0.9
5,023,077	+		GFF5030	0.29	-0.3
5,023,088	+		GFF5030	0.30	-1.4
5,023,135	+		GFF5030	0.31	+0.1
5,023,135	+		GFF5030	0.31	+0.2
5,023,143	-		GFF5030	0.32	-0.1
5,023,161	-		GFF5030	0.32	+0.0
5,023,181	-		GFF5030	0.33	+1.6
5,023,183	+		GFF5030	0.33	-0.3
5,023,190	-		GFF5030	0.34	-0.7
5,023,191	-		GFF5030	0.34	-0.2
5,023,219	-		GFF5030	0.35	+0.9
5,023,227	+		GFF5030	0.35	+0.7
5,023,227	+		GFF5030	0.35	+0.3
5,023,228	+		GFF5030	0.35	-0.1
5,023,232	+		GFF5030	0.35	-0.8
5,023,275	+		GFF5030	0.37	+0.2
5,023,277	+		GFF5030	0.37	+0.9
5,023,282	+		GFF5030	0.37	+1.6
5,023,283	-		GFF5030	0.37	-0.5
5,023,285	-		GFF5030	0.37	+1.6
5,023,285	-		GFF5030	0.37	-0.4
5,023,285	-		GFF5030	0.37	+0.0
5,023,285	-		GFF5030	0.37	+0.0
5,023,287	+		GFF5030	0.38	+0.4
5,023,300	+		GFF5030	0.38	+0.6
5,023,310	+		GFF5030	0.38	+0.8
5,023,310	+		GFF5030	0.38	+0.7
5,023,318	-		GFF5030	0.39	-0.4
5,023,318	-		GFF5030	0.39	-0.3
5,023,350	+		GFF5030	0.40	+0.6
5,023,377	-		GFF5030	0.41	-0.3
5,023,396	+		GFF5030	0.42	+0.8
5,023,396	+		GFF5030	0.42	+1.6
5,023,396	+		GFF5030	0.42	+0.6
5,023,396	+		GFF5030	0.42	+1.4
5,023,396	+		GFF5030	0.42	-0.8
5,023,396	+		GFF5030	0.42	+0.3
5,023,404	-		GFF5030	0.42	+0.2
5,023,404	-		GFF5030	0.42	+0.2
5,023,404	-		GFF5030	0.42	+1.6
5,023,404	-		GFF5030	0.42	-0.1
5,023,404	-		GFF5030	0.42	-0.2
5,023,404	-		GFF5030	0.42	-1.2
5,023,404	-		GFF5030	0.42	-0.6
5,023,404	-		GFF5030	0.42	-0.9
5,023,404	-		GFF5030	0.42	-0.5
5,023,404	-		GFF5030	0.42	+0.6
5,023,406	+		GFF5030	0.42	+0.6
5,023,417	+		GFF5030	0.43	+0.1
5,023,418	-		GFF5030	0.43	-0.5
5,023,431	+		GFF5030	0.43	-0.8
5,023,436	+		GFF5030	0.43	+1.6
5,023,444	-		GFF5030	0.44	+0.3
5,023,453	+		GFF5030	0.44	-1.4
5,023,467	-		GFF5030	0.45	+0.3
5,023,490	+		GFF5030	0.46	-0.3
5,023,490	+		GFF5030	0.46	-0.7
5,023,498	-		GFF5030	0.46	+0.3
5,023,498	-		GFF5030	0.46	+0.5
5,023,502	+		GFF5030	0.46	+0.3
5,023,502	+		GFF5030	0.46	-1.4
5,023,502	+		GFF5030	0.46	+1.1
5,023,502	+		GFF5030	0.46	+0.4
5,023,502	+		GFF5030	0.46	-0.3
5,023,502	+		GFF5030	0.46	-2.0
5,023,510	-		GFF5030	0.46	+0.1
5,023,510	-		GFF5030	0.46	-0.7
5,023,510	-		GFF5030	0.46	+1.0
5,023,510	-		GFF5030	0.46	-0.6
5,023,510	-		GFF5030	0.46	+0.7
5,023,551	-		GFF5030	0.48	-1.1
5,023,551	-		GFF5030	0.48	-0.2
5,023,562	+		GFF5030	0.49	-0.1
5,023,566	-		GFF5030	0.49	+0.7
5,023,566	-		GFF5030	0.49	+0.8
5,023,566	-		GFF5030	0.49	-0.2
5,023,566	-		GFF5030	0.49	+0.5
5,023,568	+		GFF5030	0.49	+1.6
5,023,568	+		GFF5030	0.49	+0.6
5,023,568	+		GFF5030	0.49	-0.6
5,023,570	-		GFF5030	0.49	+0.8
5,023,570	-		GFF5030	0.49	+0.7
5,023,570	-		GFF5030	0.49	-1.2
5,023,576	-		GFF5030	0.49	+1.4
5,023,576	-		GFF5030	0.49	-1.4
5,023,593	-		GFF5030	0.50	-1.7
5,023,593	-		GFF5030	0.50	-2.3
5,023,606	+		GFF5030	0.50	+0.1
5,023,611	+		GFF5030	0.50	+1.1
5,023,611	+		GFF5030	0.50	-0.5
5,023,611	+		GFF5030	0.50	-1.7
5,023,611	+		GFF5030	0.50	-0.5
5,023,611	+		GFF5030	0.50	-0.4
5,023,613	-		GFF5030	0.51	+1.0
5,023,614	-		GFF5030	0.51	-2.4
5,023,616	+		GFF5030	0.51	+1.4
5,023,616	+		GFF5030	0.51	+0.2
5,023,616	+		GFF5030	0.51	+0.3
5,023,619	-		GFF5030	0.51	+0.4
5,023,619	-		GFF5030	0.51	-0.7
5,023,628	+		GFF5030	0.51	+0.6
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5,023,940	+		GFF5030	0.64	+1.3
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5,023,951	+		GFF5030	0.64	+0.0
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5,024,005	+		GFF5030	0.66	-0.1
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5,024,013	-		GFF5030	0.67	+1.1
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5,024,026	+		GFF5030	0.67	+0.2
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5,024,128	+		GFF5030	0.71	-1.7
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5,024,578	-		GFF5030	0.89	+1.6
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5,024,620	+				-0.1
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5,024,628	-				-0.4
5,024,632	+				-0.2
5,024,691	+				+0.6
5,024,708	+				-0.4
5,024,708	+				+1.9
5,024,708	+				-0.7
5,024,710	+				+1.4
5,024,710	+				+0.5
5,024,716	-				-1.6
5,024,716	-				-0.3
5,024,716	-				+0.7
5,024,750	-				+0.9
5,024,755	+				-0.7
5,024,755	-				+0.3
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5,024,772	+				+0.1
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5,024,812	+				+1.4
5,024,812	+				+0.3
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