Strain Fitness in Sphingobium sp. HT1-2 around GFF4856

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,841,672	-		GFF4855	0.35	-0.1
4,841,690	-		GFF4855	0.36	+0.3
4,841,705	+		GFF4855	0.37	+0.7
4,841,745	+		GFF4855	0.40	+1.0
4,841,747	-		GFF4855	0.40	+0.8
4,841,747	-		GFF4855	0.40	-1.6
4,841,747	-		GFF4855	0.40	+0.6
4,841,770	+		GFF4855	0.42	+1.3
4,841,774	+		GFF4855	0.42	-0.4
4,841,803	+		GFF4855	0.44	-0.6
4,841,803	-		GFF4855	0.44	-0.5
4,841,803	-		GFF4855	0.44	-0.3
4,841,803	-		GFF4855	0.44	-0.2
4,841,811	-		GFF4855	0.45	+0.1
4,841,813	-		GFF4855	0.45	+0.5
4,841,835	-		GFF4855	0.47	-0.9
4,841,853	+		GFF4855	0.48	+1.0
4,841,938	+		GFF4855	0.54	+1.1
4,841,944	+		GFF4855	0.54	+0.3
4,841,945	-		GFF4855	0.54	-0.6
4,841,966	-		GFF4855	0.56	+1.3
4,841,975	-		GFF4855	0.56	+0.3
4,841,975	-		GFF4855	0.56	+0.2
4,841,990	-		GFF4855	0.58	+0.2
4,842,013	+		GFF4855	0.59	+1.0
4,842,020	-		GFF4855	0.60	-0.2
4,842,020	-		GFF4855	0.60	-0.0
4,842,041	+		GFF4855	0.61	+1.3
4,842,043	-		GFF4855	0.61	-0.3
4,842,045	+		GFF4855	0.61	-1.3
4,842,053	-		GFF4855	0.62	-0.9
4,842,055	+		GFF4855	0.62	+0.2
4,842,099	-		GFF4855	0.65	+1.0
4,842,121	-		GFF4855	0.67	-0.4
4,842,121	-		GFF4855	0.67	+1.5
4,842,128	+		GFF4855	0.67	+1.4
4,842,134	+		GFF4855	0.68	+1.7
4,842,136	-		GFF4855	0.68	-0.5
4,842,142	-		GFF4855	0.68	-0.3
4,842,154	+		GFF4855	0.69	+0.0
4,842,182	+		GFF4855	0.71	+0.3
4,842,203	+		GFF4855	0.73	+0.8
4,842,211	-		GFF4855	0.73	-2.0
4,842,213	+		GFF4855	0.73	+0.4
4,842,221	-		GFF4855	0.74	-1.1
4,842,253	+		GFF4855	0.76	+0.2
4,842,255	-		GFF4855	0.76	+0.5
4,842,306	-		GFF4855	0.80	+0.8
4,842,310	+		GFF4855	0.80	-0.2
4,842,338	+		GFF4855	0.82	-0.3
4,842,338	+		GFF4855	0.82	-0.8
4,842,338	+		GFF4855	0.82	-0.3
4,842,338	+		GFF4855	0.82	+1.4
4,842,338	+		GFF4855	0.82	+1.0
4,842,338	+		GFF4855	0.82	+0.5
4,842,338	+		GFF4855	0.82	-1.0
4,842,338	+		GFF4855	0.82	-1.6
4,842,338	+		GFF4855	0.82	-1.6
4,842,338	+		GFF4855	0.82	-0.3
4,842,338	+		GFF4855	0.82	+0.4
4,842,338	+		GFF4855	0.82	-1.6
4,842,338	+		GFF4855	0.82	+1.1
4,842,338	+		GFF4855	0.82	-0.3
4,842,338	+		GFF4855	0.82	-0.0
4,842,338	+		GFF4855	0.82	-1.9
4,842,338	+		GFF4855	0.82	-0.5
4,842,338	+		GFF4855	0.82	-1.2
4,842,338	+		GFF4855	0.82	+0.2
4,842,338	+		GFF4855	0.82	+0.7
4,842,338	+		GFF4855	0.82	-0.2
4,842,346	-		GFF4855	0.83	+0.7
4,842,346	-		GFF4855	0.83	+0.7
4,842,346	-		GFF4855	0.83	+0.5
4,842,346	-		GFF4855	0.83	+0.0
4,842,346	-		GFF4855	0.83	-0.9
4,842,346	-		GFF4855	0.83	+0.2
4,842,346	-		GFF4855	0.83	+0.5
4,842,346	-		GFF4855	0.83	-0.2
4,842,346	-		GFF4855	0.83	+0.2
4,842,346	-		GFF4855	0.83	-0.3
4,842,346	-		GFF4855	0.83	+0.1
4,842,346	-		GFF4855	0.83	+0.5
4,842,346	-		GFF4855	0.83	-1.9
4,842,346	-		GFF4855	0.83	-0.7
4,842,348	-		GFF4855	0.83	+0.5
4,842,356	-		GFF4855	0.84	+0.7
4,842,367	-		GFF4855	0.84	+0.5
4,842,369	-		GFF4855	0.85	+0.1
4,842,369	-		GFF4855	0.85	+0.3
4,842,369	-		GFF4855	0.85	-1.0
4,842,369	-		GFF4855	0.85	+0.2
4,842,388	-		GFF4855	0.86	+0.1
4,842,392	+		GFF4855	0.86	-0.8
4,842,441	+		GFF4855	0.90	+0.6
4,842,441	+		GFF4855	0.90	+0.7
4,842,449	-				-1.1
4,842,453	+				+0.3
4,842,453	+				+0.3
4,842,461	-				+0.7
4,842,461	-				+0.1
4,842,472	+				+1.6
4,842,480	-				-1.6
4,842,482	+				-1.1
4,842,490	-				+0.7
4,842,490	-				+0.9
4,842,504	+				+0.4
4,842,512	-				-2.0
4,842,543	-				-0.2
4,842,552	+				-2.0
4,842,560	-				+0.8
4,842,560	-				-0.1
4,842,568	+				+0.3
4,842,604	+				-0.2
4,842,615	+				+0.2
4,842,617	-				-0.1
4,842,623	+				-1.7
4,842,625	+				+1.6
4,842,625	+				-1.7
4,842,655	-				+0.4
4,842,658	+				-0.6
4,842,666	-				-1.1
4,842,679	-				+0.1
4,842,717	-				+0.7
4,842,719	-				+0.7
4,842,741	+		GFF4856	0.11	+0.3
4,842,746	+		GFF4856	0.11	-1.2
4,842,746	+		GFF4856	0.11	-0.2
4,842,746	+		GFF4856	0.11	+0.2
4,842,751	+		GFF4856	0.12	+1.2
4,842,751	+		GFF4856	0.12	+1.4
4,842,751	+		GFF4856	0.12	+1.0
4,842,751	+		GFF4856	0.12	+0.3
4,842,754	+		GFF4856	0.13	-0.8
4,842,754	-		GFF4856	0.13	+1.3
4,842,759	-		GFF4856	0.13	-0.1
4,842,759	-		GFF4856	0.13	+0.9
4,842,820	+		GFF4856	0.22	+0.8
4,842,828	-		GFF4856	0.23	+0.4
4,842,828	-		GFF4856	0.23	+0.2
4,842,838	-		GFF4856	0.24	-0.0
4,842,847	+		GFF4856	0.25	-1.3
4,842,847	+		GFF4856	0.25	+0.2
4,842,855	-		GFF4856	0.26	-2.7
4,842,887	+		GFF4856	0.31	-0.7
4,842,923	+		GFF4856	0.36	-0.3
4,842,937	+		GFF4856	0.38	-2.0
4,842,959	-		GFF4856	0.41	-1.4
4,842,965	-		GFF4856	0.41	-0.0
4,842,994	-		GFF4856	0.45	+0.5
4,843,008	-		GFF4856	0.47	-0.0
4,843,018	+		GFF4856	0.49	-2.1
4,843,019	-		GFF4856	0.49	+0.9
4,843,033	+		GFF4856	0.51	-0.2
4,843,039	+		GFF4856	0.52	-0.5
4,843,043	-		GFF4856	0.52	-1.5
4,843,057	+		GFF4856	0.54	-0.1
4,843,057	-		GFF4856	0.54	+0.0
4,843,060	-		GFF4856	0.54	+0.5
4,843,060	-		GFF4856	0.54	+0.4
4,843,062	-		GFF4856	0.55	+0.6
4,843,065	-		GFF4856	0.55	-1.6
4,843,065	-		GFF4856	0.55	-0.5
4,843,065	-		GFF4856	0.55	-0.2
4,843,083	-		GFF4856	0.58	+0.1
4,843,093	+		GFF4856	0.59	-0.2
4,843,098	+		GFF4856	0.60	-0.1
4,843,104	+		GFF4856	0.60	+0.3
4,843,105	+		GFF4856	0.61	-1.0
4,843,105	+		GFF4856	0.61	+0.1
4,843,123	-		GFF4856	0.63	+0.6
4,843,123	-		GFF4856	0.63	-0.7
4,843,125	+		GFF4856	0.63	-0.6
4,843,143	-		GFF4856	0.66	+0.2
4,843,154	+		GFF4856	0.67	-0.2
4,843,154	+		GFF4856	0.67	-1.6
4,843,154	+		GFF4856	0.67	+1.2
4,843,154	+		GFF4856	0.67	+0.8
4,843,159	+		GFF4856	0.68	+0.4
4,843,159	+		GFF4856	0.68	+1.7
4,843,162	-		GFF4856	0.68	-0.3
4,843,162	-		GFF4856	0.68	-1.7
4,843,162	-		GFF4856	0.68	-0.4
4,843,167	-		GFF4856	0.69	+0.4
4,843,199	-		GFF4856	0.73	+0.4
4,843,199	-		GFF4856	0.73	-1.6
4,843,199	-		GFF4856	0.73	-1.3
4,843,225	+		GFF4856	0.77	+1.0
4,843,225	+		GFF4856	0.77	-2.2
4,843,225	+		GFF4856	0.77	-1.8
4,843,225	+		GFF4856	0.77	+0.8
4,843,225	+		GFF4856	0.77	-0.5
4,843,225	+		GFF4856	0.77	-1.0
4,843,225	+		GFF4856	0.77	+0.8
4,843,225	+		GFF4856	0.77	-0.5
4,843,225	+		GFF4856	0.77	-0.8
4,843,225	+		GFF4856	0.77	+0.6
4,843,225	+		GFF4856	0.77	+0.1
4,843,225	+		GFF4856	0.77	+1.3
4,843,225	+		GFF4856	0.77	-0.2
4,843,225	+		GFF4856	0.77	+0.2
4,843,225	+		GFF4856	0.77	-0.1
4,843,225	+		GFF4856	0.77	-1.0
4,843,225	+		GFF4856	0.77	+2.0
4,843,225	+		GFF4856	0.77	-0.3
4,843,225	+		GFF4856	0.77	-1.0
4,843,225	+		GFF4856	0.77	+0.1
4,843,225	+		GFF4856	0.77	-0.5
4,843,225	+		GFF4856	0.77	-0.3
4,843,225	+		GFF4856	0.77	-0.4
4,843,225	+		GFF4856	0.77	+0.2
4,843,225	+		GFF4856	0.77	+0.4
4,843,225	+		GFF4856	0.77	+1.0
4,843,225	+		GFF4856	0.77	-0.3
4,843,225	+		GFF4856	0.77	+0.5
4,843,233	-		GFF4856	0.78	+1.0
4,843,233	-		GFF4856	0.78	+0.8
4,843,233	-		GFF4856	0.78	-0.1
4,843,233	-		GFF4856	0.78	-0.8
4,843,233	-		GFF4856	0.78	+0.3
4,843,233	-		GFF4856	0.78	+0.3
4,843,233	-		GFF4856	0.78	-0.3
4,843,233	-		GFF4856	0.78	+0.6
4,843,233	-		GFF4856	0.78	+0.2
4,843,233	-		GFF4856	0.78	-0.2
4,843,233	-		GFF4856	0.78	-0.2
4,843,233	-		GFF4856	0.78	-0.3
4,843,233	-		GFF4856	0.78	-0.4
4,843,233	-		GFF4856	0.78	-2.3
4,843,233	-		GFF4856	0.78	+0.8
4,843,233	-		GFF4856	0.78	+0.1
4,843,233	-		GFF4856	0.78	+0.8
4,843,233	-		GFF4856	0.78	-0.5
4,843,233	-		GFF4856	0.78	-1.9
4,843,233	-		GFF4856	0.78	-0.8
4,843,233	-		GFF4856	0.78	+0.4
4,843,233	-		GFF4856	0.78	-2.1
4,843,233	-		GFF4856	0.78	+0.8
4,843,233	-		GFF4856	0.78	-1.1
4,843,233	-		GFF4856	0.78	+1.2
4,843,233	-		GFF4856	0.78	-1.7
4,843,233	-		GFF4856	0.78	+0.4
4,843,233	-		GFF4856	0.78	-0.6
4,843,233	-		GFF4856	0.78	-1.6
4,843,233	-		GFF4856	0.78	+0.1
4,843,233	-		GFF4856	0.78	-1.0
4,843,233	-		GFF4856	0.78	-0.8
4,843,235	+		GFF4856	0.78	-1.4
4,843,235	+		GFF4856	0.78	-0.1
4,843,244	+		GFF4856	0.80	-0.5
4,843,250	-		GFF4856	0.80	+0.2
4,843,282	+		GFF4856	0.85	+1.0
4,843,302	+		GFF4856	0.87	-0.3
4,843,305	-		GFF4856	0.88	+0.4
4,843,310	-		GFF4856	0.89	+0.3
4,843,325	+				+1.3
4,843,325	+				+0.1
4,843,325	+				-0.8
4,843,325	+				-0.6
4,843,325	+				+0.4
4,843,325	+				+0.5
4,843,325	+				+0.4
4,843,325	+				+0.7
4,843,325	+				+0.4
4,843,333	-				+0.3
4,843,333	-				-0.7
4,843,333	-				+0.2
4,843,333	-				+0.9
4,843,333	-				-0.6
4,843,333	-				-0.1
4,843,333	-				+0.7
4,843,333	-				+1.0
4,843,333	-				+0.6
4,843,333	-				-1.6
4,843,333	-				-0.0
4,843,333	-				+0.8
4,843,338	+				-2.7
4,843,338	+				+0.2
4,843,340	-				-1.5
4,843,340	-				-1.3
4,843,346	-				+0.0
4,843,369	+				-0.0
4,843,372	-				-0.0
4,843,377	-				-0.4
4,843,377	-				-0.3
4,843,390	-				+0.1
4,843,413	-				-1.1
4,843,453	+				+1.0
4,843,455	+				+0.8
4,843,455	+				+0.5
4,843,455	+				-0.2
4,843,463	-				-1.4
4,843,463	-				+1.3
4,843,471	+				-0.1
4,843,471	+				+1.0
4,843,479	-				-2.0
4,843,479	-				+0.5
4,843,489	-				+0.9
4,843,492	+				+0.4
4,843,507	+				+0.2
4,843,567	+				+0.9
4,843,567	+				+0.7
4,843,567	+				-0.4
4,843,575	-		GFF4857	0.10	+1.3
4,843,575	-		GFF4857	0.10	-1.7
4,843,583	+		GFF4857	0.12	-0.0
4,843,595	+		GFF4857	0.14	+0.2
4,843,603	-		GFF4857	0.16	-0.1
4,843,627	+		GFF4857	0.21	-1.6
4,843,634	-		GFF4857	0.22	+0.1
4,843,640	+		GFF4857	0.24	+0.0
4,843,640	-		GFF4857	0.24	-1.2
4,843,681	+		GFF4857	0.32	+0.8
4,843,687	-		GFF4857	0.33	+0.8
4,843,689	-		GFF4857	0.34	-0.6
4,843,715	+		GFF4857	0.39	+0.3
4,843,715	+		GFF4857	0.39	-2.6
4,843,740	+		GFF4857	0.44	+0.5
4,843,770	-		GFF4857	0.50	+0.2
4,843,773	+		GFF4857	0.51	+1.1
4,843,778	+		GFF4857	0.52	+0.4
4,843,778	+		GFF4857	0.52	-0.4
4,843,780	+		GFF4857	0.52	-0.3
4,843,781	-		GFF4857	0.53	-1.0
4,843,783	-		GFF4857	0.53	-0.4
4,843,792	+		GFF4857	0.55	+0.4
4,843,796	-		GFF4857	0.56	-0.3
4,843,796	-		GFF4857	0.56	+0.6
4,843,799	+		GFF4857	0.56	-0.6
4,843,799	+		GFF4857	0.56	+0.6
4,843,799	+		GFF4857	0.56	+0.4
4,843,799	+		GFF4857	0.56	-0.0
4,843,799	+		GFF4857	0.56	+0.3
4,843,807	-		GFF4857	0.58	+0.9
4,843,807	-		GFF4857	0.58	+0.8
4,843,807	-		GFF4857	0.58	+1.0
4,843,807	-		GFF4857	0.58	-0.0
4,843,807	-		GFF4857	0.58	+0.4
4,843,828	+		GFF4857	0.62	-1.2
4,843,828	+		GFF4857	0.62	+0.3
4,843,828	+		GFF4857	0.62	-2.4
4,843,836	-		GFF4857	0.64	-0.1
4,843,836	-		GFF4857	0.64	+1.8
4,843,836	-		GFF4857	0.64	+0.2
4,843,843	-		GFF4857	0.65	+0.6
4,843,850	+		GFF4857	0.67	+1.2
4,843,850	+		GFF4857	0.67	+0.8
4,843,855	-		GFF4857	0.68	-0.3
4,843,858	-		GFF4857	0.69	+0.8
4,843,863	+		GFF4857	0.70	+0.7
4,843,863	+		GFF4857	0.70	-0.8
4,843,897	+		GFF4857	0.77	+1.5
4,843,898	+		GFF4857	0.77	+0.6
4,843,898	+		GFF4857	0.77	+0.2
4,843,898	+		GFF4857	0.77	-0.2
4,843,898	+		GFF4857	0.77	+0.4
4,843,899	-		GFF4857	0.77	-0.6
4,843,905	-		GFF4857	0.78	+0.1
4,843,905	-		GFF4857	0.78	+0.8
4,843,905	-		GFF4857	0.78	+0.6
4,843,906	-		GFF4857	0.78	-0.5
4,843,906	-		GFF4857	0.78	+0.1
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