Strain Fitness in Sphingobium sp. HT1-2 around GFF4797

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,791,032	-		GFF4795	0.60	+0.3
4,791,037	+		GFF4795	0.62	-0.0
4,791,037	+		GFF4795	0.62	-1.9
4,791,045	-		GFF4795	0.63	-0.7
4,791,068	-		GFF4795	0.68	-0.3
4,791,069	-		GFF4795	0.69	-1.1
4,791,071	+		GFF4795	0.69	-1.8
4,791,099	+		GFF4795	0.75	-2.8
4,791,107	-		GFF4795	0.77	-0.5
4,791,110	-		GFF4795	0.78	-1.6
4,791,123	-		GFF4795	0.81	-0.1
4,791,125	+		GFF4795	0.81	-1.3
4,791,131	-		GFF4795	0.82	-2.2
4,791,151	+		GFF4795	0.87	-1.2
4,791,153	+		GFF4795	0.87	-2.4
4,791,153	+		GFF4795	0.87	-1.4
4,791,153	+		GFF4795	0.87	-0.3
4,791,153	+		GFF4795	0.87	-0.4
4,791,153	+		GFF4795	0.87	-1.7
4,791,153	+		GFF4795	0.87	-0.5
4,791,153	+		GFF4795	0.87	-1.0
4,791,153	+		GFF4795	0.87	-2.0
4,791,153	+		GFF4795	0.87	-1.7
4,791,153	+		GFF4795	0.87	-2.3
4,791,153	+		GFF4795	0.87	+0.1
4,791,153	+		GFF4795	0.87	-1.2
4,791,153	+		GFF4795	0.87	-2.3
4,791,153	+		GFF4795	0.87	-1.3
4,791,153	+		GFF4795	0.87	-0.5
4,791,153	+		GFF4795	0.87	+0.2
4,791,153	+		GFF4795	0.87	-1.7
4,791,153	+		GFF4795	0.87	-0.7
4,791,153	+		GFF4795	0.87	-1.7
4,791,153	+		GFF4795	0.87	-1.1
4,791,161	-		GFF4795	0.89	-0.8
4,791,161	-		GFF4795	0.89	-1.4
4,791,161	-		GFF4795	0.89	-1.3
4,791,161	-		GFF4795	0.89	-2.0
4,791,161	-		GFF4795	0.89	-0.6
4,791,161	-		GFF4795	0.89	-0.8
4,791,161	-		GFF4795	0.89	-1.6
4,791,161	-		GFF4795	0.89	-1.1
4,791,161	-		GFF4795	0.89	-1.3
4,791,161	-		GFF4795	0.89	-1.4
4,791,161	-		GFF4795	0.89	-1.4
4,791,161	-		GFF4795	0.89	-0.2
4,791,161	-		GFF4795	0.89	-0.2
4,791,161	-		GFF4795	0.89	-1.2
4,791,161	-		GFF4795	0.89	-0.4
4,791,161	-		GFF4795	0.89	-2.4
4,791,161	-		GFF4795	0.89	+0.8
4,791,161	-		GFF4795	0.89	-1.9
4,791,161	-		GFF4795	0.89	-2.3
4,791,161	-		GFF4795	0.89	-0.3
4,791,161	-		GFF4795	0.89	-1.4
4,791,161	-		GFF4795	0.89	-0.9
4,791,161	-		GFF4795	0.89	-2.4
4,791,161	-		GFF4795	0.89	-1.7
4,791,161	-		GFF4795	0.89	-1.3
4,791,161	-		GFF4795	0.89	+0.3
4,791,161	-		GFF4795	0.89	-1.0
4,791,161	-		GFF4795	0.89	-2.3
4,791,161	-		GFF4795	0.89	-2.3
4,791,161	-		GFF4795	0.89	-0.9
4,791,161	-		GFF4795	0.89	-0.5
4,791,161	-		GFF4795	0.89	-0.1
4,791,161	-		GFF4795	0.89	+1.3
4,791,176	+				+0.8
4,791,214	+				+0.2
4,791,221	+				+0.6
4,791,251	+				-2.3
4,791,261	+				-1.3
4,791,269	-				-1.1
4,791,287	-				-1.1
4,791,287	-				-1.5
4,791,298	+				-0.4
4,791,306	+				+0.2
4,791,346	+				-0.7
4,791,354	-				+0.3
4,791,361	+				+0.4
4,791,361	+				+0.5
4,791,369	-				-1.9
4,791,442	-		GFF4796	0.18	-1.1
4,791,460	+		GFF4796	0.21	-3.1
4,791,471	+		GFF4796	0.23	-0.4
4,791,471	+		GFF4796	0.23	+0.0
4,791,471	+		GFF4796	0.23	+0.5
4,791,471	+		GFF4796	0.23	-1.2
4,791,471	+		GFF4796	0.23	-0.2
4,791,476	+		GFF4796	0.23	-0.8
4,791,479	-		GFF4796	0.24	-0.8
4,791,479	-		GFF4796	0.24	+0.1
4,791,479	-		GFF4796	0.24	-0.4
4,791,479	-		GFF4796	0.24	-0.8
4,791,491	+		GFF4796	0.26	-1.7
4,791,491	+		GFF4796	0.26	-0.9
4,791,491	+		GFF4796	0.26	-1.4
4,791,491	+		GFF4796	0.26	-0.6
4,791,491	+		GFF4796	0.26	-1.1
4,791,495	+		GFF4796	0.26	-3.0
4,791,499	-		GFF4796	0.27	-0.8
4,791,508	+		GFF4796	0.28	-2.2
4,791,525	+		GFF4796	0.31	-1.1
4,791,526	+		GFF4796	0.31	-1.2
4,791,526	+		GFF4796	0.31	-0.2
4,791,526	+		GFF4796	0.31	+1.1
4,791,531	+		GFF4796	0.31	-0.3
4,791,531	+		GFF4796	0.31	-0.3
4,791,534	-		GFF4796	0.32	-1.1
4,791,534	-		GFF4796	0.32	-1.9
4,791,539	-		GFF4796	0.33	-0.7
4,791,658	-		GFF4796	0.50	-0.0
4,791,673	+		GFF4796	0.52	+0.6
4,791,702	-		GFF4796	0.56	-0.3
4,791,727	-		GFF4796	0.60	+0.4
4,791,729	+		GFF4796	0.60	-1.7
4,791,729	+		GFF4796	0.60	-2.3
4,791,729	+		GFF4796	0.60	-0.3
4,791,762	+		GFF4796	0.65	-1.9
4,791,770	-		GFF4796	0.66	-0.4
4,791,791	+		GFF4796	0.69	-0.4
4,791,819	-		GFF4796	0.73	-1.0
4,791,833	-		GFF4796	0.75	-1.8
4,791,844	-		GFF4796	0.77	-0.4
4,791,844	-		GFF4796	0.77	+0.5
4,791,852	-		GFF4796	0.78	+0.3
4,791,879	+		GFF4796	0.82	-0.0
4,791,949	-				-1.5
4,791,949	-				+0.3
4,791,955	+				+0.7
4,791,963	-				-1.1
4,791,963	-				+0.5
4,791,980	-				-2.8
4,791,980	-				-1.2
4,791,985	-				-1.1
4,792,005	-				-0.8
4,792,005	-				-0.8
4,792,007	-				+0.2
4,792,028	+				+0.6
4,792,031	-				-1.5
4,792,036	-				+0.3
4,792,036	-				-0.8
4,792,050	-				-0.3
4,792,134	+		GFF4797	0.16	-0.3
4,792,137	-		GFF4797	0.17	-1.0
4,792,158	+		GFF4797	0.20	-2.5
4,792,158	+		GFF4797	0.20	+0.2
4,792,161	-		GFF4797	0.20	-2.0
4,792,163	+		GFF4797	0.20	-0.8
4,792,163	+		GFF4797	0.20	-1.1
4,792,166	-		GFF4797	0.21	-1.2
4,792,171	-		GFF4797	0.21	-1.4
4,792,271	+		GFF4797	0.35	-0.8
4,792,271	+		GFF4797	0.35	-3.4
4,792,271	+		GFF4797	0.35	-1.2
4,792,271	+		GFF4797	0.35	-0.7
4,792,279	-		GFF4797	0.36	-0.8
4,792,279	-		GFF4797	0.36	-0.4
4,792,279	-		GFF4797	0.36	-1.8
4,792,279	-		GFF4797	0.36	-1.3
4,792,287	+		GFF4797	0.37	-1.2
4,792,295	-		GFF4797	0.39	-2.1
4,792,297	-		GFF4797	0.39	+0.9
4,792,336	-		GFF4797	0.44	-0.1
4,792,339	+		GFF4797	0.45	-1.6
4,792,343	+		GFF4797	0.45	-1.3
4,792,343	+		GFF4797	0.45	-0.8
4,792,344	+		GFF4797	0.45	-1.2
4,792,351	-		GFF4797	0.46	-0.2
4,792,351	-		GFF4797	0.46	-1.7
4,792,351	-		GFF4797	0.46	-0.7
4,792,387	+		GFF4797	0.51	-0.4
4,792,395	-		GFF4797	0.52	-0.8
4,792,396	-		GFF4797	0.53	-1.7
4,792,398	+		GFF4797	0.53	-0.6
4,792,398	+		GFF4797	0.53	-0.7
4,792,403	+		GFF4797	0.54	-0.7
4,792,406	-		GFF4797	0.54	-0.1
4,792,406	-		GFF4797	0.54	-0.4
4,792,406	-		GFF4797	0.54	-0.2
4,792,436	+		GFF4797	0.58	-1.4
4,792,455	-		GFF4797	0.61	-1.3
4,792,455	-		GFF4797	0.61	+0.3
4,792,455	-		GFF4797	0.61	+0.0
4,792,455	-		GFF4797	0.61	-0.3
4,792,455	-		GFF4797	0.61	-1.8
4,792,471	+		GFF4797	0.63	-2.4
4,792,507	-		GFF4797	0.68	-1.1
4,792,537	+		GFF4797	0.72	-0.1
4,792,571	+		GFF4797	0.77	-1.6
4,792,571	+		GFF4797	0.77	-0.7
4,792,572	-		GFF4797	0.77	-1.4
4,792,579	-		GFF4797	0.78	-2.0
4,792,579	-		GFF4797	0.78	+0.5
4,792,587	-		GFF4797	0.79	-0.8
4,792,641	-		GFF4797	0.86	-0.0
4,792,651	-		GFF4797	0.88	-1.7
4,792,651	-		GFF4797	0.88	-0.6
4,792,657	-		GFF4797	0.89	-0.5
4,792,658	-		GFF4797	0.89	-0.4
4,792,675	+				-0.8
4,792,676	+				-2.1
4,792,681	+				-0.6
4,792,681	+				-1.2
4,792,684	-				-1.8
4,792,684	-				-0.0
4,792,689	-				+0.4
4,792,702	-				-0.6
4,792,702	-				-0.6
4,792,710	+				-1.4
4,792,710	+				-2.1
4,792,710	+				-1.3
4,792,746	+				-0.5
4,792,765	-				-1.4
4,792,769	+				+0.4
4,792,769	+				-2.6
4,792,769	+				-0.7
4,792,769	+				-0.4
4,792,777	-				-1.5
4,792,777	-				-1.4
4,792,777	-				+0.3
4,792,784	+				-0.6
4,792,792	-				-1.3
4,792,792	-				-1.5
4,792,796	-				+0.5
4,792,818	-				+0.9
4,792,822	+				-0.5
4,792,875	-				-1.1
4,792,875	-				-1.2
4,792,943	-				-0.9
4,792,953	-				-1.3
4,792,953	-				-2.3
4,792,959	+				-0.3
4,792,959	+				+0.3
4,792,961	+				-0.3
4,792,961	+				+1.2
4,792,967	+				+0.8
4,792,967	-				-0.8
4,792,967	-				-0.2
4,792,972	+				-1.8
4,792,993	+				-1.0
4,792,993	+				-1.2
4,793,001	-				-0.8
4,793,006	+				-2.1
4,793,007	+				-0.5
4,793,014	-				+0.5
4,793,014	-				-1.8
4,793,042	+				+0.1
4,793,042	+				-0.7
4,793,042	+				-1.5
4,793,052	+				-0.9
4,793,052	+				-0.8
4,793,060	-				-0.4
4,793,060	-				+1.1
4,793,090	+				+0.2
4,793,091	+				-0.5
4,793,099	-				-0.5
4,793,113	+		GFF4798	0.11	+0.2
4,793,121	-		GFF4798	0.12	-1.1
4,793,129	+		GFF4798	0.14	-1.7
4,793,137	-		GFF4798	0.15	+0.2
4,793,147	+		GFF4798	0.17	-1.4
4,793,149	+		GFF4798	0.17	-1.8
4,793,179	+		GFF4798	0.23	+0.0
4,793,205	+		GFF4798	0.27	+0.2
4,793,238	+		GFF4798	0.33	-2.3
4,793,247	-		GFF4798	0.35	-1.8
4,793,247	-		GFF4798	0.35	-0.9
4,793,254	+		GFF4798	0.36	-1.5
4,793,289	-		GFF4798	0.43	-0.4
4,793,307	+		GFF4798	0.46	-1.5
4,793,307	+		GFF4798	0.46	+1.5
4,793,307	+		GFF4798	0.46	-0.3
4,793,315	-		GFF4798	0.47	-1.8
4,793,315	-		GFF4798	0.47	-1.5
4,793,315	-		GFF4798	0.47	+0.3
4,793,333	+		GFF4798	0.50	+0.3
4,793,338	+		GFF4798	0.51	-0.4
4,793,382	-		GFF4798	0.59	+0.2
4,793,387	-		GFF4798	0.60	-1.2
4,793,391	-		GFF4798	0.61	-1.8
4,793,408	-		GFF4798	0.64	-0.1
4,793,408	-		GFF4798	0.64	-0.7
4,793,408	-		GFF4798	0.64	-1.2
4,793,433	+		GFF4798	0.68	+0.0
4,793,433	+		GFF4798	0.68	-1.7
4,793,433	+		GFF4798	0.68	+0.2
4,793,433	+		GFF4798	0.68	-1.4
4,793,433	+		GFF4798	0.68	-1.8
4,793,433	+		GFF4798	0.68	-0.0
4,793,434	+		GFF4798	0.69	-1.2
4,793,438	+		GFF4798	0.69	-1.3
4,793,439	+		GFF4798	0.70	-1.9
4,793,441	-		GFF4798	0.70	-1.1
4,793,441	-		GFF4798	0.70	-2.2
4,793,441	-		GFF4798	0.70	-0.0
4,793,442	-		GFF4798	0.70	-1.1
4,793,450	+		GFF4798	0.72	-1.4
4,793,453	+		GFF4798	0.72	-0.4
4,793,465	+		GFF4798	0.74	-1.5
4,793,466	-		GFF4798	0.74	-1.1
4,793,476	+		GFF4798	0.76	-0.5
4,793,485	-		GFF4798	0.78	-1.7
4,793,495	-		GFF4798	0.80	-1.1
4,793,497	+		GFF4798	0.80	+0.6
4,793,497	+		GFF4798	0.80	-2.1
4,793,497	+		GFF4798	0.80	-0.3
4,793,497	+		GFF4798	0.80	-0.6
4,793,497	+		GFF4798	0.80	-1.0
4,793,500	-		GFF4798	0.81	-0.1
4,793,505	-		GFF4798	0.81	+1.1
4,793,505	-		GFF4798	0.81	-1.6
4,793,505	-		GFF4798	0.81	+0.3
4,793,505	-		GFF4798	0.81	-0.3
4,793,505	-		GFF4798	0.81	-0.5
4,793,510	-		GFF4798	0.82	-0.4
4,793,512	+		GFF4798	0.83	-1.2
4,793,517	+		GFF4798	0.84	-1.0
4,793,525	-		GFF4798	0.85	+0.8
4,793,544	+		GFF4798	0.88	+0.7
4,793,552	-				+0.2
4,793,628	+				-1.4
4,793,652	+				+0.9
4,793,652	+				-1.3
4,793,652	+				-1.8
4,793,660	-				-2.3
4,793,660	-				+0.1
4,793,660	-				-0.1
4,793,660	-				-0.8
4,793,662	-				-0.5
4,793,673	+				-1.7
4,793,675	+				-1.1
4,793,675	+				-0.8
4,793,693	+				-1.6
4,793,693	+				-1.4
4,793,693	+				-1.7
4,793,693	+				+0.4
4,793,693	+				-0.6
4,793,693	+				+1.0
4,793,693	+				+1.0
4,793,693	+				-1.2
4,793,693	+				-1.9
4,793,693	+				+0.2
4,793,693	+				-1.7
4,793,701	-				-0.6
4,793,701	-				-0.1
4,793,701	-				+0.2
4,793,701	-				+0.2
4,793,701	-				-1.3
4,793,701	-				+0.7
4,793,701	-				-1.7
4,793,701	-				-0.7
4,793,701	-				-3.0
4,793,701	-				+0.1
4,793,701	-				-0.1
4,793,701	-				-0.5
4,793,701	-				+0.1
4,793,701	-				+0.2
4,793,701	-				+0.6
4,793,701	-				+0.2
4,793,701	-				-0.1
4,793,701	-				-1.7
4,793,709	+				-0.1
4,793,722	-				-0.2
4,793,725	+				+0.1