Strain Fitness in Sphingobium sp. HT1-2 around GFF4748

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,747,456	-		GFF4747	0.37	-0.2
4,747,456	-		GFF4747	0.37	+0.7
4,747,456	-		GFF4747	0.37	-1.8
4,747,456	-		GFF4747	0.37	-0.6
4,747,456	-		GFF4747	0.37	+0.7
4,747,482	+		GFF4747	0.39	+1.9
4,747,498	-		GFF4747	0.41	-0.2
4,747,528	-		GFF4747	0.43	-0.9
4,747,544	-		GFF4747	0.45	+0.9
4,747,544	-		GFF4747	0.45	+0.1
4,747,564	+		GFF4747	0.47	+1.1
4,747,564	+		GFF4747	0.47	-1.2
4,747,572	-		GFF4747	0.47	+1.6
4,747,572	-		GFF4747	0.47	-0.8
4,747,572	-		GFF4747	0.47	-0.8
4,747,572	-		GFF4747	0.47	-0.5
4,747,578	-		GFF4747	0.48	-2.0
4,747,589	+		GFF4747	0.49	-0.4
4,747,589	+		GFF4747	0.49	-2.2
4,747,589	+		GFF4747	0.49	-0.1
4,747,595	-		GFF4747	0.49	+0.3
4,747,597	-		GFF4747	0.49	-0.5
4,747,623	-		GFF4747	0.52	-2.8
4,747,623	-		GFF4747	0.52	-0.3
4,747,648	+		GFF4747	0.54	-0.4
4,747,648	+		GFF4747	0.54	+1.5
4,747,656	-		GFF4747	0.55	+0.7
4,747,656	-		GFF4747	0.55	-1.4
4,747,656	-		GFF4747	0.55	-1.3
4,747,656	-		GFF4747	0.55	-1.2
4,747,656	-		GFF4747	0.55	-0.5
4,747,656	-		GFF4747	0.55	+0.2
4,747,661	-		GFF4747	0.55	-0.2
4,747,675	+		GFF4747	0.56	-2.4
4,747,675	-		GFF4747	0.56	+0.5
4,747,685	+		GFF4747	0.57	+0.3
4,747,685	+		GFF4747	0.57	+1.6
4,747,693	-		GFF4747	0.58	-0.6
4,747,703	-		GFF4747	0.59	+0.5
4,747,726	+		GFF4747	0.61	-0.7
4,747,731	+		GFF4747	0.61	-0.6
4,747,739	-		GFF4747	0.62	-1.4
4,747,748	-		GFF4747	0.63	+0.2
4,747,758	-		GFF4747	0.64	-1.0
4,747,771	+		GFF4747	0.65	-0.7
4,747,773	-		GFF4747	0.65	-0.2
4,747,779	-		GFF4747	0.65	-0.4
4,747,779	-		GFF4747	0.65	-0.8
4,747,783	+		GFF4747	0.66	+0.2
4,747,783	+		GFF4747	0.66	-0.3
4,747,791	-		GFF4747	0.66	+0.6
4,747,818	+		GFF4747	0.69	+0.2
4,747,833	+		GFF4747	0.70	-1.4
4,747,833	+		GFF4747	0.70	-0.4
4,747,833	+		GFF4747	0.70	-0.8
4,747,833	+		GFF4747	0.70	+0.6
4,747,833	+		GFF4747	0.70	-0.1
4,747,833	+		GFF4747	0.70	+1.0
4,747,833	+		GFF4747	0.70	-0.4
4,747,833	+		GFF4747	0.70	-0.7
4,747,833	+		GFF4747	0.70	+0.3
4,747,833	+		GFF4747	0.70	-0.4
4,747,833	+		GFF4747	0.70	-0.0
4,747,841	-		GFF4747	0.71	+0.6
4,747,841	-		GFF4747	0.71	+0.2
4,747,841	-		GFF4747	0.71	-1.0
4,747,841	-		GFF4747	0.71	-1.2
4,747,841	-		GFF4747	0.71	+0.9
4,747,841	-		GFF4747	0.71	-0.1
4,747,841	-		GFF4747	0.71	-1.7
4,747,841	-		GFF4747	0.71	+0.6
4,747,841	-		GFF4747	0.71	+0.7
4,747,841	-		GFF4747	0.71	+1.0
4,747,841	-		GFF4747	0.71	-1.1
4,747,852	-		GFF4747	0.72	-0.0
4,747,875	+		GFF4747	0.74	-1.1
4,747,875	+		GFF4747	0.74	-1.0
4,747,875	+		GFF4747	0.74	-0.7
4,747,880	+		GFF4747	0.74	+1.3
4,747,880	+		GFF4747	0.74	-2.4
4,747,880	+		GFF4747	0.74	-0.7
4,747,883	-		GFF4747	0.75	-0.3
4,747,883	-		GFF4747	0.75	-0.7
4,747,900	+		GFF4747	0.76	-1.1
4,747,918	-		GFF4747	0.78	+0.0
4,747,931	-		GFF4747	0.79	-0.3
4,747,943	-		GFF4747	0.80	-0.5
4,747,947	+		GFF4747	0.80	-0.3
4,747,974	+		GFF4747	0.83	+1.0
4,747,974	+		GFF4747	0.83	-1.2
4,747,980	-		GFF4747	0.83	+0.5
4,748,005	-		GFF4747	0.85	-0.7
4,748,007	+		GFF4747	0.85	-1.2
4,748,007	+		GFF4747	0.85	-1.7
4,748,007	+		GFF4747	0.85	+0.3
4,748,010	-		GFF4747	0.86	+0.2
4,748,015	-		GFF4747	0.86	-1.7
4,748,020	-		GFF4747	0.87	-0.9
4,748,020	-		GFF4747	0.87	+1.6
4,748,126	+				-0.4
4,748,127	+				-1.0
4,748,127	+				-0.2
4,748,127	+				+1.2
4,748,134	-				+0.5
4,748,142	+				+0.4
4,748,255	+				+0.3
4,748,265	-				+1.2
4,748,266	+				-0.6
4,748,291	+				+1.0
4,748,291	+				-0.4
4,748,299	-				-2.4
4,748,299	-				+0.0
4,748,309	-				-1.4
4,748,356	-				-0.3
4,748,363	+				+1.5
4,748,371	-				-1.2
4,748,371	-				-0.3
4,748,371	-				+0.5
4,748,371	-				+0.5
4,748,375	-				+0.2
4,748,375	-				-1.0
4,748,382	+				+0.7
4,748,412	-				+0.2
4,748,424	+				+1.5
4,748,427	+				-1.2
4,748,432	-				-0.2
4,748,435	+				-0.2
4,748,569	-		GFF4748	0.18	-0.3
4,748,573	+		GFF4748	0.19	-0.1
4,748,583	+		GFF4748	0.20	-1.7
4,748,586	-		GFF4748	0.21	+0.3
4,748,613	+		GFF4748	0.25	-0.7
4,748,613	+		GFF4748	0.25	-2.4
4,748,641	+		GFF4748	0.29	-1.5
4,748,641	+		GFF4748	0.29	+0.5
4,748,641	+		GFF4748	0.29	+0.4
4,748,649	-		GFF4748	0.30	-0.3
4,748,669	+		GFF4748	0.33	-1.6
4,748,679	+		GFF4748	0.35	-0.8
4,748,687	-		GFF4748	0.36	-0.7
4,748,691	+		GFF4748	0.37	+0.2
4,748,699	-		GFF4748	0.38	-0.0
4,748,717	-		GFF4748	0.41	-0.8
4,748,720	+		GFF4748	0.41	+0.0
4,748,723	-		GFF4748	0.42	+1.0
4,748,738	-		GFF4748	0.44	-0.0
4,748,743	+		GFF4748	0.45	-0.7
4,748,743	+		GFF4748	0.45	-1.7
4,748,743	+		GFF4748	0.45	-3.0
4,748,743	+		GFF4748	0.45	-1.0
4,748,743	+		GFF4748	0.45	-0.7
4,748,743	+		GFF4748	0.45	-0.4
4,748,743	+		GFF4748	0.45	-0.3
4,748,743	+		GFF4748	0.45	+0.6
4,748,743	+		GFF4748	0.45	-1.8
4,748,743	+		GFF4748	0.45	+0.2
4,748,743	+		GFF4748	0.45	+0.4
4,748,743	+		GFF4748	0.45	+0.5
4,748,743	+		GFF4748	0.45	-1.8
4,748,743	+		GFF4748	0.45	-2.4
4,748,743	+		GFF4748	0.45	+0.7
4,748,743	+		GFF4748	0.45	-0.5
4,748,743	+		GFF4748	0.45	-0.5
4,748,743	+		GFF4748	0.45	-0.2
4,748,743	+		GFF4748	0.45	+1.3
4,748,743	+		GFF4748	0.45	-0.4
4,748,746	-		GFF4748	0.45	+0.3
4,748,751	-		GFF4748	0.46	+0.8
4,748,751	-		GFF4748	0.46	+0.4
4,748,751	-		GFF4748	0.46	+1.3
4,748,751	-		GFF4748	0.46	+1.1
4,748,751	-		GFF4748	0.46	+0.6
4,748,751	-		GFF4748	0.46	+0.4
4,748,751	-		GFF4748	0.46	+0.4
4,748,751	-		GFF4748	0.46	-0.7
4,748,751	-		GFF4748	0.46	+0.9
4,748,751	-		GFF4748	0.46	-0.7
4,748,751	-		GFF4748	0.46	+0.9
4,748,751	-		GFF4748	0.46	-0.6
4,748,751	-		GFF4748	0.46	+0.8
4,748,751	-		GFF4748	0.46	-0.3
4,748,751	-		GFF4748	0.46	+0.9
4,748,751	-		GFF4748	0.46	+0.2
4,748,751	-		GFF4748	0.46	-0.3
4,748,751	-		GFF4748	0.46	-1.8
4,748,751	-		GFF4748	0.46	+0.4
4,748,751	-		GFF4748	0.46	+1.0
4,748,751	-		GFF4748	0.46	+0.5
4,748,751	-		GFF4748	0.46	-1.1
4,748,753	+		GFF4748	0.47	+0.2
4,748,753	+		GFF4748	0.47	-0.1
4,748,761	-		GFF4748	0.48	-0.6
4,748,761	-		GFF4748	0.48	-0.1
4,748,761	-		GFF4748	0.48	-0.8
4,748,780	+		GFF4748	0.51	-3.2
4,748,825	+		GFF4748	0.58	+0.2
4,748,833	-		GFF4748	0.59	+1.0
4,748,867	+		GFF4748	0.64	+0.6
4,748,915	+		GFF4748	0.72	+0.3
4,748,923	-		GFF4748	0.73	+1.1
4,748,940	-		GFF4748	0.76	-0.1
4,748,951	-		GFF4748	0.77	+0.1
4,748,992	+		GFF4748	0.84	+0.5
4,748,999	+		GFF4748	0.85	-0.6
4,749,002	-		GFF4748	0.85	-0.8
4,749,022	+		GFF4748	0.88	-0.8
4,749,023	+		GFF4748	0.88	-0.8
4,749,033	+				-0.3
4,749,033	+				-0.2
4,749,041	-				-0.7
4,749,041	-				-0.3
4,749,041	-				-1.7
4,749,067	+				+0.6
4,749,074	+				-0.2
4,749,074	+				-0.1
4,749,082	-				+0.2
4,749,082	-				+1.0
4,749,082	-				-2.8
4,749,084	+				+0.2
4,749,084	+				+0.0
4,749,084	+				+0.2
4,749,084	+				-0.1
4,749,084	+				+0.4
4,749,084	+				-0.0
4,749,084	+				-0.1
4,749,092	-				-0.2
4,749,116	+				+1.1
4,749,118	+				+0.2
4,749,118	+				+1.1
4,749,124	-				-0.1
4,749,126	-				+0.4
4,749,126	-				-2.3
4,749,126	-				-1.1
4,749,132	-				+0.0
4,749,136	+				-3.0
4,749,144	-				-0.7
4,749,145	+				+0.0
4,749,145	+				+0.7
4,749,145	+				+1.4
4,749,161	+				-2.2
4,749,179	-				-0.6
4,749,200	+				-0.8
4,749,292	-				-1.4
4,749,307	-				+0.5
4,749,309	-				-0.8
4,749,318	+				-0.2
4,749,319	+				+0.7
4,749,353	-		GFF4749	0.11	-0.6
4,749,353	-		GFF4749	0.11	+0.4
4,749,353	-		GFF4749	0.11	+0.3
4,749,381	+		GFF4749	0.18	-0.7
4,749,381	+		GFF4749	0.18	-0.4
4,749,404	+		GFF4749	0.23	+0.6
4,749,438	+		GFF4749	0.32	+0.9
4,749,438	+		GFF4749	0.32	+0.5
4,749,438	+		GFF4749	0.32	+0.2
4,749,438	+		GFF4749	0.32	+0.6
4,749,438	+		GFF4749	0.32	-2.4
4,749,438	+		GFF4749	0.32	-0.2
4,749,438	+		GFF4749	0.32	-2.8
4,749,438	+		GFF4749	0.32	+0.1
4,749,438	+		GFF4749	0.32	-1.6
4,749,446	-		GFF4749	0.34	-0.6
4,749,446	-		GFF4749	0.34	-0.5
4,749,446	-		GFF4749	0.34	+0.4
4,749,446	-		GFF4749	0.34	+1.3
4,749,446	-		GFF4749	0.34	-2.9
4,749,446	-		GFF4749	0.34	+0.2
4,749,446	-		GFF4749	0.34	+0.9
4,749,446	-		GFF4749	0.34	+0.4
4,749,446	-		GFF4749	0.34	-0.4
4,749,446	-		GFF4749	0.34	-0.1
4,749,448	+		GFF4749	0.34	+0.3
4,749,448	+		GFF4749	0.34	+0.5
4,749,451	-		GFF4749	0.35	+0.7
4,749,469	+		GFF4749	0.40	-0.4
4,749,491	+		GFF4749	0.45	+0.2
4,749,499	+		GFF4749	0.47	-0.2
4,749,499	+		GFF4749	0.47	+0.9
4,749,514	+		GFF4749	0.51	-1.0
4,749,514	+		GFF4749	0.51	-0.3
4,749,524	-		GFF4749	0.53	+0.8
4,749,579	-		GFF4749	0.67	-0.4
4,749,587	+		GFF4749	0.69	+0.3
4,749,592	+		GFF4749	0.70	-0.8
4,749,595	-		GFF4749	0.71	-0.3
4,749,600	-		GFF4749	0.72	+0.5
4,749,600	-		GFF4749	0.72	-0.2
4,749,600	-		GFF4749	0.72	-1.6
4,749,600	-		GFF4749	0.72	+0.3
4,749,606	+		GFF4749	0.73	-0.4
4,749,606	+		GFF4749	0.73	-0.4
4,749,607	-		GFF4749	0.74	-1.7
4,749,611	+		GFF4749	0.75	+1.0
4,749,621	+		GFF4749	0.77	+0.6
4,749,631	-		GFF4749	0.80	-0.1
4,749,645	-		GFF4749	0.83	+0.6
4,749,653	+		GFF4749	0.85	-1.0
4,749,654	+		GFF4749	0.85	+0.9
4,749,667	-		GFF4749	0.88	-0.0
4,749,667	-		GFF4749	0.88	-1.3
4,749,668	+		GFF4749	0.89	-0.3
4,749,668	+		GFF4749	0.89	+0.0
4,749,676	-				-1.7
4,749,680	+				-0.4
4,749,688	-				+0.4
4,749,692	+				-1.5
4,749,741	-				-0.8
4,749,758	-				-1.8
4,749,793	-				-1.1
4,749,859	+				+0.7
4,749,901	-		GFF4750	0.11	-0.4
4,749,905	+		GFF4750	0.12	-1.3
4,749,905	+		GFF4750	0.12	+1.1
4,749,908	+		GFF4750	0.12	+0.9
4,749,913	-		GFF4750	0.12	-0.3
4,749,913	-		GFF4750	0.12	+0.4
4,749,916	+		GFF4750	0.13	-0.6
4,749,937	+		GFF4750	0.14	+0.2
4,749,956	+		GFF4750	0.16	-0.5
4,749,971	+		GFF4750	0.17	+1.2
4,749,971	+		GFF4750	0.17	-1.1
4,749,972	-		GFF4750	0.17	+0.7
4,749,978	+		GFF4750	0.17	-0.7
4,749,978	+		GFF4750	0.17	+0.0
4,749,978	+		GFF4750	0.17	-0.4
4,749,978	+		GFF4750	0.17	+0.0
4,749,986	-		GFF4750	0.18	+0.5
4,749,986	-		GFF4750	0.18	-0.3
4,750,029	+		GFF4750	0.21	-1.7
4,750,032	-		GFF4750	0.22	-1.0
4,750,057	-		GFF4750	0.23	-2.4
4,750,071	+		GFF4750	0.25	-0.1
4,750,071	+		GFF4750	0.25	-1.1
4,750,071	+		GFF4750	0.25	+0.0
4,750,079	-		GFF4750	0.25	-1.4
4,750,079	-		GFF4750	0.25	+0.4
4,750,079	-		GFF4750	0.25	+1.4
4,750,081	+		GFF4750	0.25	+1.7
4,750,094	+		GFF4750	0.26	-1.7
4,750,094	+		GFF4750	0.26	-0.0