Strain Fitness in Sphingobium sp. HT1-2 around GFF4746

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,743,727	-		GFF4745	0.49	-0.1
4,743,729	+		GFF4745	0.49	+0.3
4,743,729	+		GFF4745	0.49	-0.1
4,743,731	+		GFF4745	0.49	+0.5
4,743,732	-		GFF4745	0.49	-0.9
4,743,733	-		GFF4745	0.49	+0.4
4,743,737	-		GFF4745	0.49	-1.8
4,743,737	-		GFF4745	0.49	-2.7
4,743,762	-		GFF4745	0.51	-1.3
4,743,764	+		GFF4745	0.51	-1.8
4,743,764	+		GFF4745	0.51	-1.0
4,743,772	-		GFF4745	0.51	-0.5
4,743,772	-		GFF4745	0.51	-0.6
4,743,773	+		GFF4745	0.51	-0.8
4,743,788	+		GFF4745	0.52	+1.2
4,743,793	+		GFF4745	0.53	+1.0
4,743,793	+		GFF4745	0.53	-0.3
4,743,796	-		GFF4745	0.53	+0.6
4,743,797	+		GFF4745	0.53	+0.5
4,743,799	+		GFF4745	0.53	+0.7
4,743,812	-		GFF4745	0.54	+0.6
4,743,844	-		GFF4745	0.55	-0.8
4,743,860	+		GFF4745	0.56	-0.3
4,743,861	+		GFF4745	0.56	-2.2
4,743,869	-		GFF4745	0.57	+0.6
4,743,870	-		GFF4745	0.57	+0.0
4,743,895	+		GFF4745	0.58	+2.0
4,743,898	-		GFF4745	0.58	-0.2
4,743,903	-		GFF4745	0.59	-1.3
4,743,917	+		GFF4745	0.60	+0.1
4,743,917	+		GFF4745	0.60	+0.3
4,743,925	-		GFF4745	0.60	-0.1
4,743,926	-		GFF4745	0.60	-2.5
4,743,929	+		GFF4745	0.60	-0.1
4,743,929	+		GFF4745	0.60	+0.0
4,743,937	-		GFF4745	0.61	+0.6
4,743,960	+		GFF4745	0.62	-0.1
4,743,978	-		GFF4745	0.63	+0.7
4,743,978	-		GFF4745	0.63	-0.1
4,743,987	-		GFF4745	0.63	-0.9
4,743,987	-		GFF4745	0.63	+1.4
4,744,010	+		GFF4745	0.65	-2.0
4,744,032	+		GFF4745	0.66	-0.4
4,744,032	+		GFF4745	0.66	+1.2
4,744,040	-		GFF4745	0.66	-0.1
4,744,040	-		GFF4745	0.66	-1.4
4,744,041	-		GFF4745	0.66	-2.0
4,744,051	+		GFF4745	0.67	-2.3
4,744,051	+		GFF4745	0.67	+0.7
4,744,059	-		GFF4745	0.67	+0.1
4,744,067	+		GFF4745	0.68	-0.8
4,744,074	+		GFF4745	0.68	+1.4
4,744,082	-		GFF4745	0.69	-1.8
4,744,095	+		GFF4745	0.69	+0.2
4,744,119	-		GFF4745	0.71	+0.5
4,744,130	+		GFF4745	0.71	-0.3
4,744,156	-		GFF4745	0.73	+1.2
4,744,156	-		GFF4745	0.73	-0.2
4,744,184	+		GFF4745	0.74	-0.2
4,744,199	+		GFF4745	0.75	-0.6
4,744,240	+		GFF4745	0.78	-0.9
4,744,245	+		GFF4745	0.78	-0.8
4,744,248	+		GFF4745	0.78	-1.1
4,744,252	+		GFF4745	0.78	-0.5
4,744,252	+		GFF4745	0.78	+0.2
4,744,253	-		GFF4745	0.78	+1.0
4,744,257	+		GFF4745	0.79	-0.1
4,744,257	+		GFF4745	0.79	+0.3
4,744,257	+		GFF4745	0.79	+0.6
4,744,260	-		GFF4745	0.79	+0.6
4,744,265	-		GFF4745	0.79	+0.0
4,744,265	-		GFF4745	0.79	+0.2
4,744,267	-		GFF4745	0.79	-0.2
4,744,281	+		GFF4745	0.80	-0.0
4,744,281	+		GFF4745	0.80	-1.4
4,744,294	+		GFF4745	0.81	-0.5
4,744,330	-		GFF4745	0.83	-1.2
4,744,341	-		GFF4745	0.83	+0.2
4,744,344	-		GFF4745	0.83	-0.2
4,744,347	+		GFF4745	0.84	+0.4
4,744,366	-		GFF4745	0.85	+1.0
4,744,379	+		GFF4745	0.85	+1.3
4,744,392	+		GFF4745	0.86	-0.2
4,744,399	+		GFF4745	0.86	-0.2
4,744,443	+		GFF4745	0.89	+0.3
4,744,448	+		GFF4745	0.89	-0.3
4,744,459	-		GFF4745	0.90	+0.6
4,744,511	+				-0.4
4,744,533	+				+1.3
4,744,533	+				+1.2
4,744,538	+				+0.2
4,744,541	-				+0.1
4,744,546	+				-0.0
4,744,554	+				-0.3
4,744,566	+				-1.6
4,744,590	-				-0.3
4,744,641	-				-0.1
4,744,650	+				-0.8
4,744,658	-				+0.2
4,744,672	+				-0.3
4,744,688	+				+0.4
4,744,759	-				-0.7
4,744,762	+				-0.8
4,744,816	-				-0.4
4,744,837	-				-0.8
4,744,839	+				-1.0
4,744,842	-				+1.4
4,744,843	-				+1.0
4,744,866	-				-1.1
4,744,866	-				+1.0
4,744,871	+				+0.3
4,744,895	+				-0.8
4,744,896	+				+0.2
4,744,915	+				-1.3
4,744,931	-		GFF4746	0.10	-1.4
4,744,936	-		GFF4746	0.11	-0.5
4,744,976	+		GFF4746	0.12	-0.6
4,744,982	-		GFF4746	0.13	-0.7
4,744,993	+		GFF4746	0.13	-0.7
4,745,000	+		GFF4746	0.13	+1.3
4,745,006	+		GFF4746	0.14	+0.1
4,745,008	-		GFF4746	0.14	-1.5
4,745,008	-		GFF4746	0.14	-0.6
4,745,008	-		GFF4746	0.14	-1.4
4,745,015	+		GFF4746	0.14	-1.2
4,745,029	+		GFF4746	0.15	-0.2
4,745,040	+		GFF4746	0.15	+0.4
4,745,048	-		GFF4746	0.15	+1.1
4,745,068	+		GFF4746	0.16	-2.0
4,745,110	+		GFF4746	0.18	+1.2
4,745,122	+		GFF4746	0.18	+0.4
4,745,161	-		GFF4746	0.20	+0.6
4,745,164	+		GFF4746	0.20	+1.3
4,745,168	+		GFF4746	0.20	+0.3
4,745,172	-		GFF4746	0.21	-0.1
4,745,213	-		GFF4746	0.22	+0.1
4,745,218	+		GFF4746	0.23	+1.3
4,745,218	+		GFF4746	0.23	+0.4
4,745,218	+		GFF4746	0.23	-2.2
4,745,226	-		GFF4746	0.23	+0.2
4,745,226	-		GFF4746	0.23	+0.2
4,745,226	-		GFF4746	0.23	-0.2
4,745,226	-		GFF4746	0.23	-1.5
4,745,231	-		GFF4746	0.23	-1.0
4,745,231	-		GFF4746	0.23	-0.1
4,745,231	-		GFF4746	0.23	+0.5
4,745,234	+		GFF4746	0.23	+0.7
4,745,237	-		GFF4746	0.23	+0.7
4,745,241	-		GFF4746	0.24	+1.4
4,745,244	+		GFF4746	0.24	-0.1
4,745,244	+		GFF4746	0.24	+1.4
4,745,244	+		GFF4746	0.24	-1.2
4,745,252	-		GFF4746	0.24	+0.3
4,745,252	-		GFF4746	0.24	+0.7
4,745,252	-		GFF4746	0.24	+0.0
4,745,261	+		GFF4746	0.24	-0.6
4,745,261	+		GFF4746	0.24	+0.5
4,745,266	+		GFF4746	0.25	+0.8
4,745,266	+		GFF4746	0.25	-0.3
4,745,266	+		GFF4746	0.25	-0.7
4,745,266	+		GFF4746	0.25	-0.4
4,745,266	+		GFF4746	0.25	-0.6
4,745,269	-		GFF4746	0.25	+0.3
4,745,274	+		GFF4746	0.25	+1.0
4,745,274	-		GFF4746	0.25	-0.5
4,745,274	-		GFF4746	0.25	-0.3
4,745,274	-		GFF4746	0.25	+0.7
4,745,292	-		GFF4746	0.26	-0.0
4,745,316	-		GFF4746	0.27	+1.0
4,745,337	+		GFF4746	0.28	+0.2
4,745,339	+		GFF4746	0.28	-1.4
4,745,339	+		GFF4746	0.28	+0.1
4,745,339	+		GFF4746	0.28	-0.1
4,745,339	+		GFF4746	0.28	-1.4
4,745,339	+		GFF4746	0.28	+0.3
4,745,339	+		GFF4746	0.28	+0.5
4,745,347	-		GFF4746	0.28	-1.9
4,745,347	-		GFF4746	0.28	-0.7
4,745,347	-		GFF4746	0.28	-0.1
4,745,347	-		GFF4746	0.28	+1.1
4,745,347	-		GFF4746	0.28	+0.3
4,745,347	-		GFF4746	0.28	+1.4
4,745,347	-		GFF4746	0.28	-1.7
4,745,347	-		GFF4746	0.28	-1.4
4,745,349	+		GFF4746	0.28	-2.5
4,745,366	+		GFF4746	0.29	-1.0
4,745,371	+		GFF4746	0.29	+0.2
4,745,414	+		GFF4746	0.31	+0.7
4,745,436	+		GFF4746	0.32	-2.8
4,745,436	+		GFF4746	0.32	-0.7
4,745,468	+		GFF4746	0.33	-0.9
4,745,475	+		GFF4746	0.34	-1.3
4,745,495	+		GFF4746	0.34	-0.5
4,745,501	+		GFF4746	0.35	+0.5
4,745,501	+		GFF4746	0.35	+0.3
4,745,504	-		GFF4746	0.35	-0.1
4,745,504	-		GFF4746	0.35	+1.5
4,745,506	+		GFF4746	0.35	-0.3
4,745,509	-		GFF4746	0.35	-0.9
4,745,514	-		GFF4746	0.35	+0.9
4,745,547	-		GFF4746	0.37	-0.3
4,745,580	+		GFF4746	0.38	-1.1
4,745,580	+		GFF4746	0.38	-0.8
4,745,588	-		GFF4746	0.38	-0.2
4,745,588	-		GFF4746	0.38	-0.6
4,745,588	-		GFF4746	0.38	+0.6
4,745,588	-		GFF4746	0.38	-1.0
4,745,588	-		GFF4746	0.38	-0.7
4,745,588	-		GFF4746	0.38	+0.5
4,745,588	-		GFF4746	0.38	-0.1
4,745,597	-		GFF4746	0.39	+2.0
4,745,617	-		GFF4746	0.40	+0.1
4,745,627	-		GFF4746	0.40	-0.3
4,745,654	+		GFF4746	0.41	-0.8
4,745,662	-		GFF4746	0.41	+0.3
4,745,674	+		GFF4746	0.42	+0.6
4,745,681	+		GFF4746	0.42	-0.7
4,745,681	+		GFF4746	0.42	-0.4
4,745,689	-		GFF4746	0.43	-0.5
4,745,689	-		GFF4746	0.43	-0.5
4,745,689	-		GFF4746	0.43	-0.3
4,745,689	-		GFF4746	0.43	+0.5
4,745,689	-		GFF4746	0.43	+0.4
4,745,707	-		GFF4746	0.43	+1.7
4,745,724	-		GFF4746	0.44	-0.3
4,745,740	+		GFF4746	0.45	+0.3
4,745,748	-		GFF4746	0.45	-1.0
4,745,774	+		GFF4746	0.46	+1.1
4,745,774	+		GFF4746	0.46	-0.1
4,745,774	+		GFF4746	0.46	+0.2
4,745,782	-		GFF4746	0.47	+0.5
4,745,782	-		GFF4746	0.47	-1.1
4,745,782	-		GFF4746	0.47	-0.5
4,745,782	-		GFF4746	0.47	+0.9
4,745,782	-		GFF4746	0.47	-0.3
4,745,782	-		GFF4746	0.47	+0.3
4,745,785	+		GFF4746	0.47	+0.3
4,745,801	-		GFF4746	0.47	-2.1
4,745,898	+		GFF4746	0.51	-0.5
4,745,909	+		GFF4746	0.52	-0.8
4,745,914	+		GFF4746	0.52	-1.8
4,745,930	-		GFF4746	0.53	-1.2
4,745,963	-		GFF4746	0.54	-0.5
4,745,977	+		GFF4746	0.55	-0.2
4,745,992	-		GFF4746	0.55	+1.5
4,745,995	+		GFF4746	0.56	+0.3
4,746,011	-		GFF4746	0.56	+1.5
4,746,025	-		GFF4746	0.57	+0.4
4,746,106	-		GFF4746	0.60	+0.5
4,746,131	+		GFF4746	0.61	+0.9
4,746,137	+		GFF4746	0.62	-1.4
4,746,153	+		GFF4746	0.62	+1.1
4,746,163	-		GFF4746	0.63	-1.3
4,746,195	+		GFF4746	0.64	-2.6
4,746,197	-		GFF4746	0.64	-0.0
4,746,203	-		GFF4746	0.64	-1.0
4,746,203	-		GFF4746	0.64	-0.5
4,746,221	+		GFF4746	0.65	+0.3
4,746,221	+		GFF4746	0.65	+0.5
4,746,229	-		GFF4746	0.66	-0.9
4,746,229	-		GFF4746	0.66	+0.4
4,746,233	+		GFF4746	0.66	-1.7
4,746,239	-		GFF4746	0.66	+0.9
4,746,241	-		GFF4746	0.66	-0.5
4,746,246	-		GFF4746	0.66	+0.2
4,746,251	-		GFF4746	0.66	-1.1
4,746,253	-		GFF4746	0.67	-0.6
4,746,267	+		GFF4746	0.67	+0.2
4,746,269	-		GFF4746	0.67	-1.3
4,746,275	-		GFF4746	0.68	-1.2
4,746,275	-		GFF4746	0.68	+0.9
4,746,313	-		GFF4746	0.69	-0.4
4,746,313	-		GFF4746	0.69	-0.6
4,746,325	-		GFF4746	0.70	-0.9
4,746,360	+		GFF4746	0.71	-0.7
4,746,396	+		GFF4746	0.73	+0.2
4,746,412	-		GFF4746	0.73	-0.2
4,746,412	-		GFF4746	0.73	-0.3
4,746,412	-		GFF4746	0.73	-1.1
4,746,431	+		GFF4746	0.74	-1.7
4,746,435	-		GFF4746	0.74	-0.0
4,746,444	-		GFF4746	0.75	-1.8
4,746,444	-		GFF4746	0.75	-0.1
4,746,454	-		GFF4746	0.75	-1.4
4,746,465	+		GFF4746	0.76	-0.5
4,746,496	+		GFF4746	0.77	-2.4
4,746,540	+		GFF4746	0.79	-1.4
4,746,553	-		GFF4746	0.79	-0.3
4,746,640	-		GFF4746	0.83	+0.2
4,746,641	+		GFF4746	0.83	-0.4
4,746,641	+		GFF4746	0.83	-0.1
4,746,641	+		GFF4746	0.83	+0.4
4,746,649	+		GFF4746	0.83	-0.1
4,746,649	-		GFF4746	0.83	+0.0
4,746,649	-		GFF4746	0.83	-0.4
4,746,651	+		GFF4746	0.84	+0.6
4,746,668	+		GFF4746	0.84	+1.2
4,746,668	+		GFF4746	0.84	+0.7
4,746,668	+		GFF4746	0.84	-1.4
4,746,668	+		GFF4746	0.84	+0.4
4,746,668	+		GFF4746	0.84	+1.2
4,746,668	+		GFF4746	0.84	+0.3
4,746,668	+		GFF4746	0.84	-0.8
4,746,676	-		GFF4746	0.85	+0.4
4,746,676	-		GFF4746	0.85	-0.6
4,746,676	-		GFF4746	0.85	-0.4
4,746,676	-		GFF4746	0.85	-1.0
4,746,676	-		GFF4746	0.85	-1.4
4,746,676	-		GFF4746	0.85	-0.7
4,746,676	-		GFF4746	0.85	+1.2
4,746,676	-		GFF4746	0.85	+0.8
4,746,676	-		GFF4746	0.85	+0.3
4,746,676	-		GFF4746	0.85	+0.1
4,746,676	-		GFF4746	0.85	-1.0
4,746,676	-		GFF4746	0.85	-1.1
4,746,676	-		GFF4746	0.85	+0.4
4,746,676	-		GFF4746	0.85	-1.3
4,746,678	+		GFF4746	0.85	-0.3
4,746,688	+		GFF4746	0.85	-0.1
4,746,691	-		GFF4746	0.85	-0.7
4,746,710	-		GFF4746	0.86	-1.5
4,746,710	-		GFF4746	0.86	+0.4
4,746,759	-		GFF4746	0.88	+0.5
4,746,779	-		GFF4746	0.89	+0.6
4,746,806	+				+0.6
4,746,814	-				-0.2
4,746,833	+				+0.0
4,746,851	+				+0.4
4,746,851	+				-1.0
4,746,851	+				+0.7
4,746,865	-				+0.3
4,746,865	-				+0.3
4,746,877	+				-0.2
4,746,896	-				-0.7
4,746,899	+				+0.8
4,746,958	+				-0.1
4,746,958	+				-2.8
4,746,963	+				-0.7
4,746,963	+				+0.2
4,746,995	-				-0.7
4,747,007	+				+0.9
4,747,016	+				-0.4
4,747,016	+				-1.6
4,747,024	-				+0.2
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