Strain Fitness in Sphingobium sp. HT1-2 around GFF4721

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,720,257	-		GFF4719	0.69	-1.9
4,720,268	+		GFF4719	0.70	+1.1
4,720,270	+		GFF4719	0.70	+0.0
4,720,273	+		GFF4719	0.70	+0.2
4,720,276	+		GFF4719	0.70	+0.2
4,720,282	-		GFF4719	0.71	-1.1
4,720,286	+		GFF4719	0.71	-0.9
4,720,288	+		GFF4719	0.71	+0.5
4,720,293	+		GFF4719	0.72	+0.4
4,720,293	+		GFF4719	0.72	-0.7
4,720,293	+		GFF4719	0.72	+0.0
4,720,294	-		GFF4719	0.72	-0.1
4,720,296	-		GFF4719	0.72	-1.1
4,720,296	-		GFF4719	0.72	+0.6
4,720,301	-		GFF4719	0.73	-2.0
4,720,301	-		GFF4719	0.73	+1.4
4,720,301	-		GFF4719	0.73	-2.1
4,720,301	-		GFF4719	0.73	-0.0
4,720,301	-		GFF4719	0.73	-1.1
4,720,301	-		GFF4719	0.73	-1.3
4,720,301	-		GFF4719	0.73	-2.2
4,720,301	-		GFF4719	0.73	-0.3
4,720,301	-		GFF4719	0.73	-0.4
4,720,338	+		GFF4719	0.76	-0.6
4,720,338	+		GFF4719	0.76	-1.1
4,720,338	+		GFF4719	0.76	-0.2
4,720,338	+		GFF4719	0.76	-0.1
4,720,338	+		GFF4719	0.76	+0.5
4,720,343	+		GFF4719	0.76	-1.5
4,720,343	+		GFF4719	0.76	-2.0
4,720,346	-		GFF4719	0.77	-0.4
4,720,346	-		GFF4719	0.77	+0.9
4,720,346	-		GFF4719	0.77	+0.5
4,720,346	-		GFF4719	0.77	-0.3
4,720,346	-		GFF4719	0.77	+0.2
4,720,346	-		GFF4719	0.77	-0.3
4,720,346	-		GFF4719	0.77	-0.3
4,720,351	-		GFF4719	0.77	-0.4
4,720,351	-		GFF4719	0.77	-0.4
4,720,383	+		GFF4719	0.80	+0.4
4,720,385	+		GFF4719	0.80	-0.6
4,720,401	+		GFF4719	0.82	+0.4
4,720,438	-		GFF4719	0.85	-0.9
4,720,522	-				-0.4
4,720,538	+				-0.9
4,720,545	+				+0.2
4,720,565	-				+0.2
4,720,588	+				-0.4
4,720,596	+				+0.3
4,720,596	-				+0.1
4,720,596	-				-0.1
4,720,596	-				+0.2
4,720,630	-				-0.5
4,720,630	-				-0.2
4,720,642	+				+0.3
4,720,651	-				+0.4
4,720,675	+				-0.4
4,720,681	+				+0.4
4,720,692	+				+0.1
4,720,695	-				-0.6
4,720,710	-		GFF4720	0.11	+0.6
4,720,733	+		GFF4720	0.15	-0.2
4,720,750	+		GFF4720	0.18	-2.1
4,720,768	+		GFF4720	0.21	+0.7
4,720,768	+		GFF4720	0.21	-1.2
4,720,768	+		GFF4720	0.21	+0.6
4,720,768	+		GFF4720	0.21	-0.8
4,720,768	+		GFF4720	0.21	-1.1
4,720,773	+		GFF4720	0.22	+0.4
4,720,773	+		GFF4720	0.22	+0.5
4,720,776	-		GFF4720	0.22	-0.1
4,720,781	-		GFF4720	0.23	+0.6
4,720,781	-		GFF4720	0.23	+0.8
4,720,786	+		GFF4720	0.24	-0.3
4,720,788	-		GFF4720	0.24	-0.1
4,720,794	-		GFF4720	0.25	-0.0
4,720,822	+		GFF4720	0.30	-1.7
4,720,822	+		GFF4720	0.30	+1.3
4,720,822	+		GFF4720	0.30	-1.4
4,720,822	+		GFF4720	0.30	+1.2
4,720,830	-		GFF4720	0.31	-0.2
4,720,830	-		GFF4720	0.31	-0.2
4,720,858	+		GFF4720	0.36	+0.9
4,720,866	-		GFF4720	0.37	+0.1
4,720,866	-		GFF4720	0.37	-1.6
4,720,866	-		GFF4720	0.37	-0.7
4,720,869	-		GFF4720	0.37	+0.2
4,720,931	-		GFF4720	0.48	+0.5
4,720,933	+		GFF4720	0.48	+1.3
4,720,933	+		GFF4720	0.48	+0.6
4,720,941	-		GFF4720	0.49	-2.4
4,720,941	-		GFF4720	0.49	+0.6
4,720,941	-		GFF4720	0.49	-0.7
4,720,941	-		GFF4720	0.49	-0.4
4,720,941	-		GFF4720	0.49	+0.6
4,720,948	-		GFF4720	0.50	-0.4
4,720,974	+		GFF4720	0.55	-0.1
4,720,980	+		GFF4720	0.56	-0.7
4,720,988	+		GFF4720	0.57	+1.8
4,720,998	-		GFF4720	0.58	-0.2
4,721,000	+		GFF4720	0.59	+0.2
4,721,049	+		GFF4720	0.67	-0.3
4,721,049	+		GFF4720	0.67	+0.2
4,721,049	+		GFF4720	0.67	+0.8
4,721,050	-		GFF4720	0.67	+0.9
4,721,056	+		GFF4720	0.68	+0.2
4,721,057	-		GFF4720	0.68	+0.3
4,721,071	-		GFF4720	0.70	-0.0
4,721,081	+		GFF4720	0.72	-0.8
4,721,081	+		GFF4720	0.72	-1.7
4,721,081	+		GFF4720	0.72	+0.8
4,721,081	+		GFF4720	0.72	-1.5
4,721,081	+		GFF4720	0.72	-0.4
4,721,081	+		GFF4720	0.72	+0.5
4,721,081	+		GFF4720	0.72	-0.0
4,721,081	+		GFF4720	0.72	+0.5
4,721,081	+		GFF4720	0.72	+0.2
4,721,088	-		GFF4720	0.73	-0.7
4,721,089	-		GFF4720	0.73	-0.1
4,721,089	-		GFF4720	0.73	-1.2
4,721,089	-		GFF4720	0.73	+0.0
4,721,089	-		GFF4720	0.73	-0.1
4,721,089	-		GFF4720	0.73	+0.1
4,721,089	-		GFF4720	0.73	+0.3
4,721,089	-		GFF4720	0.73	+0.3
4,721,106	+		GFF4720	0.76	+0.6
4,721,106	+		GFF4720	0.76	-1.1
4,721,113	+		GFF4720	0.77	-0.4
4,721,113	+		GFF4720	0.77	+0.3
4,721,135	+		GFF4720	0.81	-0.9
4,721,135	+		GFF4720	0.81	-0.9
4,721,143	-		GFF4720	0.82	+0.2
4,721,143	-		GFF4720	0.82	-0.4
4,721,176	+		GFF4720	0.88	+0.1
4,721,176	+		GFF4720	0.88	+0.2
4,721,176	+		GFF4720	0.88	+0.8
4,721,184	-		GFF4720	0.89	+0.5
4,721,184	-		GFF4720	0.89	-1.3
4,721,184	-		GFF4720	0.89	+1.5
4,721,236	+				+0.4
4,721,239	-				+0.4
4,721,293	+				-0.6
4,721,294	-				+0.1
4,721,298	+				-0.1
4,721,298	+				+0.4
4,721,298	+				-0.3
4,721,306	-				+0.1
4,721,306	-				+0.1
4,721,353	+				+0.9
4,721,353	+				-0.7
4,721,354	-				+0.2
4,721,356	+				-1.9
4,721,368	-				+1.0
4,721,392	+		GFF4721	0.10	-1.0
4,721,392	+		GFF4721	0.10	-1.0
4,721,399	-		GFF4721	0.11	-0.9
4,721,400	-		GFF4721	0.11	-0.4
4,721,400	-		GFF4721	0.11	-0.2
4,721,400	-		GFF4721	0.11	-0.0
4,721,437	-		GFF4721	0.13	+0.1
4,721,481	+		GFF4721	0.17	+0.6
4,721,481	+		GFF4721	0.17	+1.3
4,721,481	+		GFF4721	0.17	+0.1
4,721,486	+		GFF4721	0.17	-1.2
4,721,486	+		GFF4721	0.17	-0.1
4,721,489	-		GFF4721	0.17	-0.8
4,721,493	+		GFF4721	0.17	+0.9
4,721,493	+		GFF4721	0.17	-0.2
4,721,493	+		GFF4721	0.17	+0.3
4,721,493	+		GFF4721	0.17	-0.4
4,721,496	+		GFF4721	0.18	+0.1
4,721,501	+		GFF4721	0.18	-1.8
4,721,501	-		GFF4721	0.18	+1.0
4,721,501	-		GFF4721	0.18	+0.1
4,721,531	+		GFF4721	0.20	+0.1
4,721,533	+		GFF4721	0.20	+0.1
4,721,533	+		GFF4721	0.20	+0.6
4,721,533	+		GFF4721	0.20	+2.0
4,721,533	+		GFF4721	0.20	-1.7
4,721,533	+		GFF4721	0.20	+1.3
4,721,533	+		GFF4721	0.20	+0.4
4,721,533	+		GFF4721	0.20	+0.3
4,721,533	+		GFF4721	0.20	-0.9
4,721,533	+		GFF4721	0.20	-2.2
4,721,533	+		GFF4721	0.20	+0.3
4,721,538	+		GFF4721	0.21	+0.3
4,721,541	-		GFF4721	0.21	-1.6
4,721,541	-		GFF4721	0.21	+0.1
4,721,541	-		GFF4721	0.21	-1.3
4,721,541	-		GFF4721	0.21	+0.9
4,721,541	-		GFF4721	0.21	+0.0
4,721,541	-		GFF4721	0.21	-1.7
4,721,541	-		GFF4721	0.21	-1.8
4,721,541	-		GFF4721	0.21	-0.0
4,721,541	-		GFF4721	0.21	+0.8
4,721,541	-		GFF4721	0.21	+1.1
4,721,541	-		GFF4721	0.21	+0.9
4,721,541	-		GFF4721	0.21	+1.2
4,721,545	+		GFF4721	0.21	-0.3
4,721,553	+		GFF4721	0.22	+1.3
4,721,553	+		GFF4721	0.22	+0.9
4,721,553	+		GFF4721	0.22	+0.3
4,721,561	-		GFF4721	0.22	-0.9
4,721,561	-		GFF4721	0.22	-0.1
4,721,561	-		GFF4721	0.22	-0.4
4,721,561	-		GFF4721	0.22	+0.1
4,721,561	-		GFF4721	0.22	-0.7
4,721,563	+		GFF4721	0.23	-0.5
4,721,563	+		GFF4721	0.23	-0.4
4,721,563	+		GFF4721	0.23	-1.0
4,721,563	+		GFF4721	0.23	-0.4
4,721,563	+		GFF4721	0.23	+0.1
4,721,571	-		GFF4721	0.23	+0.7
4,721,571	-		GFF4721	0.23	-0.9
4,721,571	-		GFF4721	0.23	+0.9
4,721,571	-		GFF4721	0.23	-0.3
4,721,585	-		GFF4721	0.24	+0.1
4,721,585	-		GFF4721	0.24	-0.8
4,721,585	-		GFF4721	0.24	-1.8
4,721,585	-		GFF4721	0.24	-0.8
4,721,585	-		GFF4721	0.24	+0.2
4,721,590	-		GFF4721	0.24	+0.2
4,721,590	-		GFF4721	0.24	-0.3
4,721,590	-		GFF4721	0.24	-0.5
4,721,603	-		GFF4721	0.25	+1.2
4,721,622	+		GFF4721	0.27	-0.4
4,721,630	-		GFF4721	0.27	-3.1
4,721,649	-		GFF4721	0.29	-0.5
4,721,670	-		GFF4721	0.30	-1.1
4,721,672	-		GFF4721	0.30	+0.3
4,721,684	-		GFF4721	0.31	+0.8
4,721,699	+		GFF4721	0.32	+1.3
4,721,716	+		GFF4721	0.34	-2.0
4,721,721	+		GFF4721	0.34	-0.7
4,721,726	+		GFF4721	0.34	-0.0
4,721,734	-		GFF4721	0.35	-0.2
4,721,734	-		GFF4721	0.35	-0.2
4,721,734	-		GFF4721	0.35	+0.0
4,721,739	-		GFF4721	0.35	+1.7
4,721,779	-		GFF4721	0.38	+0.3
4,721,828	+		GFF4721	0.42	-1.8
4,721,828	+		GFF4721	0.42	-0.1
4,721,828	+		GFF4721	0.42	+1.3
4,721,828	+		GFF4721	0.42	-0.9
4,721,828	+		GFF4721	0.42	-0.7
4,721,828	+		GFF4721	0.42	-1.2
4,721,828	+		GFF4721	0.42	+0.9
4,721,828	+		GFF4721	0.42	+0.6
4,721,836	-		GFF4721	0.42	+0.5
4,721,836	-		GFF4721	0.42	-0.4
4,721,841	+		GFF4721	0.43	-1.1
4,721,877	+		GFF4721	0.45	-0.3
4,721,932	+		GFF4721	0.49	+0.6
4,721,932	+		GFF4721	0.49	+0.1
4,721,932	+		GFF4721	0.49	+0.9
4,721,939	-		GFF4721	0.50	+0.6
4,721,939	-		GFF4721	0.50	+1.1
4,721,940	-		GFF4721	0.50	+0.6
4,721,940	-		GFF4721	0.50	+0.2
4,721,940	-		GFF4721	0.50	+0.5
4,721,940	-		GFF4721	0.50	+0.5
4,721,940	-		GFF4721	0.50	+1.0
4,721,956	+		GFF4721	0.51	-2.0
4,721,965	-		GFF4721	0.52	-2.4
4,721,975	-		GFF4721	0.53	+0.1
4,721,975	-		GFF4721	0.53	+0.7
4,721,975	-		GFF4721	0.53	-0.2
4,721,975	-		GFF4721	0.53	-1.3
4,721,978	+		GFF4721	0.53	-0.8
4,722,013	-		GFF4721	0.55	-0.1
4,722,016	+		GFF4721	0.56	-0.9
4,722,016	+		GFF4721	0.56	+0.5
4,722,016	+		GFF4721	0.56	+0.3
4,722,016	+		GFF4721	0.56	-0.8
4,722,024	-		GFF4721	0.56	-1.3
4,722,024	-		GFF4721	0.56	-0.2
4,722,036	+		GFF4721	0.57	+0.8
4,722,038	+		GFF4721	0.57	-0.9
4,722,038	+		GFF4721	0.57	+0.8
4,722,038	+		GFF4721	0.57	-0.5
4,722,046	+		GFF4721	0.58	-1.1
4,722,046	-		GFF4721	0.58	-0.2
4,722,046	-		GFF4721	0.58	-0.8
4,722,070	-		GFF4721	0.60	-0.1
4,722,085	+		GFF4721	0.61	-0.5
4,722,093	-		GFF4721	0.61	-0.1
4,722,095	+		GFF4721	0.61	+0.1
4,722,095	+		GFF4721	0.61	+0.3
4,722,095	+		GFF4721	0.61	+0.6
4,722,103	-		GFF4721	0.62	+0.7
4,722,103	-		GFF4721	0.62	-0.9
4,722,103	-		GFF4721	0.62	-0.6
4,722,130	+		GFF4721	0.64	+0.1
4,722,138	-		GFF4721	0.65	-2.3
4,722,138	-		GFF4721	0.65	+0.8
4,722,138	-		GFF4721	0.65	+0.3
4,722,184	+		GFF4721	0.68	-1.3
4,722,184	+		GFF4721	0.68	-1.0
4,722,184	-		GFF4721	0.68	+0.6
4,722,192	-		GFF4721	0.68	-1.1
4,722,192	-		GFF4721	0.68	-1.7
4,722,194	-		GFF4721	0.69	+0.8
4,722,197	+		GFF4721	0.69	-0.5
4,722,205	-		GFF4721	0.69	+0.1
4,722,219	+		GFF4721	0.70	+0.7
4,722,219	+		GFF4721	0.70	+0.5
4,722,227	-		GFF4721	0.71	-0.1
4,722,250	+		GFF4721	0.73	-1.5
4,722,259	+		GFF4721	0.73	+0.4
4,722,267	-		GFF4721	0.74	+0.5
4,722,304	+		GFF4721	0.77	+0.9
4,722,304	+		GFF4721	0.77	-0.7
4,722,312	-		GFF4721	0.77	-3.2
4,722,312	-		GFF4721	0.77	-1.3
4,722,334	-		GFF4721	0.79	-1.0
4,722,366	-		GFF4721	0.81	-0.4
4,722,367	-		GFF4721	0.81	+0.2
4,722,388	+		GFF4721	0.83	-0.3
4,722,392	-		GFF4721	0.83	-1.2
4,722,399	+		GFF4721	0.84	+0.0
4,722,421	-		GFF4721	0.85	+0.4
4,722,442	+		GFF4721	0.87	+0.4
4,722,467	-		GFF4721	0.89	-0.9
4,722,493	+				+0.9
4,722,501	-				+0.0
4,722,505	+				+0.1
4,722,526	+				+1.3
4,722,534	-				+0.5
4,722,536	+				+0.1
4,722,536	+				-0.3
4,722,536	+				+0.0
4,722,536	+				-2.2
4,722,536	+				+0.7
4,722,543	+				+0.5
4,722,543	+				-0.7
4,722,544	-				-0.3
4,722,544	-				-0.6
4,722,544	-				-0.4
4,722,544	-				+0.5
4,722,551	+				-0.2
4,722,551	+				-0.7
4,722,551	+				+0.4
4,722,551	-				+0.4
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