Strain Fitness in Sphingobium sp. HT1-2 around GFF4673

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,667,966	+				+0.9
4,667,971	+				+0.9
4,667,987	+				-0.4
4,668,055	+				+0.3
4,668,119	+				+0.9
4,668,119	+				+0.4
4,668,121	+				-2.2
4,668,121	+				-1.8
4,668,129	-				+0.4
4,668,139	-				+0.5
4,668,148	+				+1.2
4,668,148	+				+1.3
4,668,148	+				+1.2
4,668,148	+				+0.3
4,668,151	-				+0.6
4,668,151	-				+0.9
4,668,156	-				+1.5
4,668,156	-				-0.1
4,668,156	-				+0.1
4,668,156	-				-0.4
4,668,156	-				-0.1
4,668,156	-				+1.2
4,668,182	+				-0.8
4,668,189	+		GFF4672	0.10	-2.4
4,668,191	-		GFF4672	0.10	-0.0
4,668,197	-		GFF4672	0.11	+0.4
4,668,198	+		GFF4672	0.11	+1.6
4,668,218	-		GFF4672	0.14	-0.7
4,668,218	-		GFF4672	0.14	+1.0
4,668,237	-		GFF4672	0.16	-0.1
4,668,262	+		GFF4672	0.19	+0.6
4,668,277	+		GFF4672	0.21	-0.3
4,668,287	+		GFF4672	0.22	-0.5
4,668,327	-		GFF4672	0.26	-1.2
4,668,327	-		GFF4672	0.26	+0.8
4,668,329	+		GFF4672	0.27	+0.4
4,668,332	-		GFF4672	0.27	-0.6
4,668,332	-		GFF4672	0.27	+0.2
4,668,335	+		GFF4672	0.27	+0.5
4,668,335	+		GFF4672	0.27	+0.7
4,668,343	-		GFF4672	0.28	-0.6
4,668,359	+		GFF4672	0.30	+1.1
4,668,361	+		GFF4672	0.30	+0.8
4,668,362	-		GFF4672	0.30	-0.8
4,668,372	+		GFF4672	0.32	-1.6
4,668,372	+		GFF4672	0.32	+0.0
4,668,372	+		GFF4672	0.32	+0.2
4,668,402	-		GFF4672	0.35	+0.2
4,668,404	+		GFF4672	0.35	+1.4
4,668,412	-		GFF4672	0.36	-1.4
4,668,412	-		GFF4672	0.36	+1.5
4,668,412	-		GFF4672	0.36	-0.3
4,668,423	+		GFF4672	0.38	+0.3
4,668,434	+		GFF4672	0.39	+0.3
4,668,434	+		GFF4672	0.39	-0.9
4,668,434	+		GFF4672	0.39	-1.0
4,668,434	+		GFF4672	0.39	+1.8
4,668,434	+		GFF4672	0.39	+0.5
4,668,434	+		GFF4672	0.39	-0.1
4,668,434	+		GFF4672	0.39	-0.7
4,668,434	+		GFF4672	0.39	+1.1
4,668,434	+		GFF4672	0.39	+0.1
4,668,434	+		GFF4672	0.39	+0.8
4,668,434	+		GFF4672	0.39	-0.7
4,668,434	+		GFF4672	0.39	+0.1
4,668,434	+		GFF4672	0.39	-0.4
4,668,434	+		GFF4672	0.39	-0.7
4,668,434	+		GFF4672	0.39	+0.9
4,668,434	+		GFF4672	0.39	-1.4
4,668,434	+		GFF4672	0.39	-0.7
4,668,434	+		GFF4672	0.39	+0.4
4,668,434	+		GFF4672	0.39	-0.3
4,668,434	+		GFF4672	0.39	-0.3
4,668,434	+		GFF4672	0.39	-1.0
4,668,434	+		GFF4672	0.39	+0.9
4,668,434	+		GFF4672	0.39	-0.9
4,668,434	+		GFF4672	0.39	+0.5
4,668,434	+		GFF4672	0.39	+0.1
4,668,434	+		GFF4672	0.39	-0.3
4,668,434	+		GFF4672	0.39	+0.2
4,668,434	+		GFF4672	0.39	+1.0
4,668,434	+		GFF4672	0.39	+0.4
4,668,434	+		GFF4672	0.39	+0.9
4,668,434	+		GFF4672	0.39	+0.1
4,668,434	+		GFF4672	0.39	-1.4
4,668,434	+		GFF4672	0.39	+0.8
4,668,434	+		GFF4672	0.39	-0.5
4,668,434	+		GFF4672	0.39	+1.0
4,668,434	+		GFF4672	0.39	-0.5
4,668,434	+		GFF4672	0.39	+0.4
4,668,434	+		GFF4672	0.39	-0.7
4,668,434	+		GFF4672	0.39	+0.1
4,668,434	+		GFF4672	0.39	-0.5
4,668,434	+		GFF4672	0.39	-0.2
4,668,434	+		GFF4672	0.39	+0.8
4,668,434	+		GFF4672	0.39	+0.4
4,668,434	+		GFF4672	0.39	+0.4
4,668,434	+		GFF4672	0.39	+0.6
4,668,434	+		GFF4672	0.39	-1.3
4,668,434	+		GFF4672	0.39	-0.7
4,668,434	+		GFF4672	0.39	+1.8
4,668,434	+		GFF4672	0.39	+1.7
4,668,434	+		GFF4672	0.39	+1.2
4,668,434	+		GFF4672	0.39	+0.0
4,668,434	+		GFF4672	0.39	+1.7
4,668,434	+		GFF4672	0.39	-0.1
4,668,434	+		GFF4672	0.39	-0.2
4,668,434	+		GFF4672	0.39	-0.1
4,668,434	+		GFF4672	0.39	+0.4
4,668,434	+		GFF4672	0.39	+0.8
4,668,442	-		GFF4672	0.40	+0.2
4,668,442	-		GFF4672	0.40	-0.4
4,668,442	-		GFF4672	0.40	+0.7
4,668,442	-		GFF4672	0.40	+1.0
4,668,442	-		GFF4672	0.40	+0.4
4,668,442	-		GFF4672	0.40	+0.1
4,668,442	-		GFF4672	0.40	+0.4
4,668,442	-		GFF4672	0.40	-1.2
4,668,442	-		GFF4672	0.40	+1.0
4,668,442	-		GFF4672	0.40	+0.1
4,668,442	-		GFF4672	0.40	-1.5
4,668,442	-		GFF4672	0.40	+1.1
4,668,442	-		GFF4672	0.40	+0.9
4,668,442	-		GFF4672	0.40	-1.0
4,668,442	-		GFF4672	0.40	-0.2
4,668,442	-		GFF4672	0.40	-0.4
4,668,442	-		GFF4672	0.40	+1.4
4,668,442	-		GFF4672	0.40	+0.2
4,668,442	-		GFF4672	0.40	-2.3
4,668,442	-		GFF4672	0.40	+1.3
4,668,442	-		GFF4672	0.40	+1.5
4,668,442	-		GFF4672	0.40	-0.3
4,668,442	-		GFF4672	0.40	+0.3
4,668,442	-		GFF4672	0.40	+0.4
4,668,442	-		GFF4672	0.40	+0.4
4,668,442	-		GFF4672	0.40	+0.8
4,668,442	-		GFF4672	0.40	-0.2
4,668,442	-		GFF4672	0.40	+1.3
4,668,442	-		GFF4672	0.40	+0.8
4,668,442	-		GFF4672	0.40	-0.5
4,668,442	-		GFF4672	0.40	-1.0
4,668,442	-		GFF4672	0.40	-0.4
4,668,442	-		GFF4672	0.40	+1.2
4,668,442	-		GFF4672	0.40	-0.4
4,668,442	-		GFF4672	0.40	-1.2
4,668,442	-		GFF4672	0.40	+0.3
4,668,442	-		GFF4672	0.40	-0.3
4,668,442	-		GFF4672	0.40	+0.4
4,668,442	-		GFF4672	0.40	-2.4
4,668,442	-		GFF4672	0.40	+0.3
4,668,442	-		GFF4672	0.40	+0.1
4,668,442	-		GFF4672	0.40	+1.4
4,668,442	-		GFF4672	0.40	-0.1
4,668,442	-		GFF4672	0.40	-0.4
4,668,442	-		GFF4672	0.40	+0.7
4,668,442	-		GFF4672	0.40	+0.1
4,668,442	-		GFF4672	0.40	-0.9
4,668,442	-		GFF4672	0.40	-0.8
4,668,442	-		GFF4672	0.40	+0.9
4,668,442	-		GFF4672	0.40	+0.0
4,668,442	-		GFF4672	0.40	-2.2
4,668,442	-		GFF4672	0.40	+0.9
4,668,442	-		GFF4672	0.40	-1.8
4,668,442	-		GFF4672	0.40	-0.4
4,668,442	-		GFF4672	0.40	-1.0
4,668,442	-		GFF4672	0.40	+0.2
4,668,442	-		GFF4672	0.40	+0.2
4,668,442	-		GFF4672	0.40	+1.0
4,668,442	-		GFF4672	0.40	-2.4
4,668,442	-		GFF4672	0.40	+1.8
4,668,451	+		GFF4672	0.41	+0.4
4,668,451	+		GFF4672	0.41	-2.0
4,668,470	+		GFF4672	0.43	-1.5
4,668,475	+		GFF4672	0.44	+0.5
4,668,477	+		GFF4672	0.44	+1.5
4,668,478	-		GFF4672	0.44	-0.9
4,668,478	-		GFF4672	0.44	-0.1
4,668,485	-		GFF4672	0.45	+0.9
4,668,492	+		GFF4672	0.46	-0.7
4,668,492	+		GFF4672	0.46	-1.2
4,668,497	+		GFF4672	0.46	+1.4
4,668,497	+		GFF4672	0.46	-0.2
4,668,497	+		GFF4672	0.46	+0.0
4,668,497	-		GFF4672	0.46	-1.9
4,668,499	-		GFF4672	0.46	+0.6
4,668,505	-		GFF4672	0.47	+0.0
4,668,505	-		GFF4672	0.47	-0.5
4,668,505	-		GFF4672	0.47	+1.2
4,668,505	-		GFF4672	0.47	+1.4
4,668,510	-		GFF4672	0.48	-0.5
4,668,510	-		GFF4672	0.48	+0.3
4,668,510	-		GFF4672	0.48	+0.8
4,668,510	-		GFF4672	0.48	-0.7
4,668,515	+		GFF4672	0.48	+0.0
4,668,518	-		GFF4672	0.49	+0.8
4,668,518	-		GFF4672	0.49	+0.2
4,668,518	-		GFF4672	0.49	+0.2
4,668,520	+		GFF4672	0.49	+0.0
4,668,520	+		GFF4672	0.49	+1.5
4,668,523	-		GFF4672	0.49	+0.1
4,668,528	-		GFF4672	0.50	+0.2
4,668,528	-		GFF4672	0.50	+0.4
4,668,530	+		GFF4672	0.50	-0.6
4,668,552	+		GFF4672	0.53	-0.3
4,668,565	-		GFF4672	0.54	+0.5
4,668,565	-		GFF4672	0.54	+1.2
4,668,575	-		GFF4672	0.55	+0.8
4,668,580	+		GFF4672	0.56	+1.5
4,668,583	-		GFF4672	0.56	+1.1
4,668,585	+		GFF4672	0.56	+0.4
4,668,588	-		GFF4672	0.57	-0.5
4,668,607	+		GFF4672	0.59	-0.6
4,668,633	+		GFF4672	0.62	-0.4
4,668,634	+		GFF4672	0.62	+0.6
4,668,642	-		GFF4672	0.63	+1.2
4,668,642	-		GFF4672	0.63	+0.2
4,668,677	+		GFF4672	0.67	-0.1
4,668,683	+		GFF4672	0.68	-0.1
4,668,691	-		GFF4672	0.69	+0.7
4,668,703	-		GFF4672	0.70	+0.1
4,668,703	-		GFF4672	0.70	+0.1
4,668,706	-		GFF4672	0.71	+0.4
4,668,718	-		GFF4672	0.72	-0.5
4,668,718	-		GFF4672	0.72	+0.4
4,668,718	-		GFF4672	0.72	+0.6
4,668,718	-		GFF4672	0.72	-0.6
4,668,740	+		GFF4672	0.74	+0.8
4,668,740	+		GFF4672	0.74	+0.9
4,668,740	+		GFF4672	0.74	+1.2
4,668,748	-		GFF4672	0.75	-0.2
4,668,748	-		GFF4672	0.75	-0.6
4,668,748	-		GFF4672	0.75	+0.3
4,668,759	+		GFF4672	0.77	-1.8
4,668,763	-		GFF4672	0.77	+0.6
4,668,767	-		GFF4672	0.78	+0.0
4,668,811	-		GFF4672	0.83	-2.2
4,668,811	-		GFF4672	0.83	+0.4
4,668,820	+		GFF4672	0.84	-0.1
4,668,820	+		GFF4672	0.84	-0.5
4,668,822	+		GFF4672	0.84	+1.4
4,668,822	+		GFF4672	0.84	-0.6
4,668,822	+		GFF4672	0.84	+1.0
4,668,822	+		GFF4672	0.84	+0.2
4,668,822	+		GFF4672	0.84	-0.1
4,668,822	+		GFF4672	0.84	-0.4
4,668,822	+		GFF4672	0.84	+0.1
4,668,828	-		GFF4672	0.85	+1.2
4,668,828	-		GFF4672	0.85	-0.7
4,668,830	-		GFF4672	0.85	-0.1
4,668,830	-		GFF4672	0.85	-0.2
4,668,830	-		GFF4672	0.85	+1.8
4,668,830	-		GFF4672	0.85	+0.3
4,668,830	-		GFF4672	0.85	+0.2
4,668,830	-		GFF4672	0.85	+0.3
4,668,830	-		GFF4672	0.85	-0.3
4,668,835	+		GFF4672	0.86	-1.1
4,668,835	+		GFF4672	0.86	+1.2
4,668,835	+		GFF4672	0.86	-0.1
4,668,843	-		GFF4672	0.86	-0.3
4,668,843	-		GFF4672	0.86	-0.4
4,668,845	+		GFF4672	0.87	+0.4
4,668,861	+		GFF4672	0.89	+0.9
4,668,861	+		GFF4672	0.89	-0.2
4,668,866	+		GFF4672	0.89	-0.2
4,668,866	+		GFF4672	0.89	+0.3
4,668,866	+		GFF4672	0.89	+0.6
4,668,866	+		GFF4672	0.89	+0.2
4,668,866	+		GFF4672	0.89	+1.7
4,668,866	+		GFF4672	0.89	-1.4
4,668,866	+		GFF4672	0.89	-0.8
4,668,866	+		GFF4672	0.89	-0.2
4,668,866	+		GFF4672	0.89	+1.1
4,668,866	+		GFF4672	0.89	+1.1
4,668,866	+		GFF4672	0.89	+1.5
4,668,866	+		GFF4672	0.89	+0.7
4,668,866	+		GFF4672	0.89	+0.1
4,668,869	-		GFF4672	0.90	+0.9
4,668,869	-		GFF4672	0.90	+1.2
4,668,869	-		GFF4672	0.90	-0.2
4,668,869	-		GFF4672	0.90	+0.5
4,668,871	+		GFF4672	0.90	+0.9
4,668,871	+		GFF4672	0.90	+0.1
4,668,871	+		GFF4672	0.90	-1.4
4,668,871	+		GFF4672	0.90	+1.1
4,668,871	+		GFF4672	0.90	+0.5
4,668,871	+		GFF4672	0.90	-0.6
4,668,871	+		GFF4672	0.90	-0.0
4,668,871	+		GFF4672	0.90	+0.9
4,668,871	+		GFF4672	0.90	-1.4
4,668,871	+		GFF4672	0.90	+0.4
4,668,871	+		GFF4672	0.90	-0.4
4,668,871	+		GFF4672	0.90	-1.0
4,668,871	+		GFF4672	0.90	+0.2
4,668,871	+		GFF4672	0.90	+1.6
4,668,871	+		GFF4672	0.90	+0.0
4,668,871	+		GFF4672	0.90	-0.6
4,668,871	+		GFF4672	0.90	-0.7
4,668,871	+		GFF4672	0.90	-1.2
4,668,871	+		GFF4672	0.90	+0.4
4,668,871	+		GFF4672	0.90	-0.3
4,668,871	+		GFF4672	0.90	-0.0
4,668,871	+		GFF4672	0.90	+0.5
4,668,871	+		GFF4672	0.90	-0.4
4,668,871	+		GFF4672	0.90	-0.5
4,668,871	+		GFF4672	0.90	-1.2
4,668,871	+		GFF4672	0.90	-1.7
4,668,871	+		GFF4672	0.90	+0.6
4,668,874	-				+0.6
4,668,874	-				+1.2
4,668,874	-				+0.5
4,668,874	-				+1.5
4,668,874	-				-0.5
4,668,874	-				+0.0
4,668,874	-				+0.2
4,668,874	-				-1.5
4,668,874	-				+0.4
4,668,874	-				+1.0
4,668,876	+				+0.3
4,668,876	+				+0.3
4,668,879	-				-0.4
4,668,879	-				+0.2
4,668,879	-				+0.5
4,668,879	-				-0.1
4,668,879	-				+1.3
4,668,879	-				+2.0
4,668,879	-				-0.5
4,668,879	-				+0.6
4,668,879	-				-2.4
4,668,879	-				-0.4
4,668,879	-				+0.4
4,668,879	-				+0.7
4,668,879	-				+0.4
4,668,879	-				+1.5
4,668,879	-				+0.3
4,668,879	-				+1.1
4,668,879	-				+1.0
4,668,879	-				+1.0
4,668,879	-				-0.6
4,668,879	-				-0.2
4,668,879	-				-1.0
4,668,879	-				-1.1
4,668,879	-				-0.7
4,668,879	-				-1.4
4,668,879	-				-0.2
4,668,879	-				-0.1
4,668,879	-				+0.1
4,668,879	-				+0.8
4,668,879	-				-0.2
4,668,879	-				+1.9
4,668,879	-				-0.1
4,668,879	-				+0.6
4,668,879	-				+1.1
4,668,879	-				+0.6
4,668,879	-				+0.2
4,668,879	-				-0.4
4,668,879	-				+0.9
4,668,879	-				-1.7
4,668,884	+				+0.1
4,668,966	-				+0.2
4,668,983	+				+0.9
4,668,983	+				+0.0
4,668,994	+				-0.8
4,669,002	+				+0.4
4,669,004	+				-1.2
4,669,012	-				+0.6
4,669,012	-				+0.2
4,669,019	+				+0.5
4,669,019	+				+0.3
4,669,027	-				+1.4
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4,669,027	-				-0.4
4,669,038	+				+0.2
4,669,076	+				-0.2
4,669,084	-				+0.1
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4,669,144	+		GFF4673	0.11	-1.4
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4,669,175	-		GFF4673	0.13	+1.1
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4,669,195	-		GFF4673	0.14	+1.1
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4,669,195	-		GFF4673	0.14	-0.1
4,669,195	-		GFF4673	0.14	-1.3
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4,670,161	-		GFF4673	0.71	-1.0
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4,670,182	-		GFF4673	0.72	-0.7
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4,670,485	+				+1.5
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4,670,485	+				+0.5
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4,670,485	+				+0.3
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4,670,488	-				-1.6
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4,670,493	-				+0.1
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4,670,508	-				-0.6
4,670,535	-				+1.5
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4,670,596	+				-0.6
4,670,596	+				+0.9
4,670,596	+				-1.7
4,670,604	-				+0.6
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4,670,670	+				+0.4
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4,670,671	-				-0.3
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4,670,704	-				-0.4
4,670,717	-				-1.8
4,670,720	-				+0.9
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4,670,735	+				-1.5
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4,670,743	-				-0.3
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