Strain Fitness in Sphingobium sp. HT1-2 around GFF4670

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,665,704	-		GFF4667	0.86	+0.4
4,665,710	-		GFF4667	0.87	+1.1
4,665,710	-		GFF4667	0.87	-1.5
4,665,710	-		GFF4667	0.87	-0.7
4,665,712	-		GFF4667	0.87	-0.4
4,665,713	-		GFF4667	0.87	+0.7
4,665,720	+		GFF4667	0.87	+0.6
4,665,720	+		GFF4667	0.87	-1.2
4,665,725	+		GFF4667	0.88	-1.4
4,665,725	+		GFF4667	0.88	+1.1
4,665,725	+		GFF4667	0.88	+0.1
4,665,726	+		GFF4667	0.88	+1.2
4,665,726	+		GFF4667	0.88	-0.3
4,665,728	-		GFF4667	0.88	+0.6
4,665,728	-		GFF4667	0.88	+0.1
4,665,728	-		GFF4667	0.88	-0.6
4,665,728	-		GFF4667	0.88	-0.3
4,665,733	+		GFF4667	0.88	-0.6
4,665,733	-		GFF4667	0.88	+0.7
4,665,733	-		GFF4667	0.88	-0.7
4,665,733	-		GFF4667	0.88	+0.5
4,665,733	-		GFF4667	0.88	-0.3
4,665,733	-		GFF4667	0.88	-1.7
4,665,748	+		GFF4667	0.90	+0.5
4,665,754	-				+0.8
4,665,761	+				+0.0
4,665,761	+				-0.4
4,665,761	+				-1.0
4,665,761	+				-0.2
4,665,761	+				+0.4
4,665,761	+				-0.2
4,665,761	+				-1.7
4,665,761	+				+0.9
4,665,761	+				-0.1
4,665,761	+				-0.7
4,665,761	+				-0.5
4,665,761	+				+0.0
4,665,761	+				+0.3
4,665,762	-				-0.9
4,665,768	+				+0.2
4,665,768	-				-0.7
4,665,769	+				+1.3
4,665,769	+				-1.3
4,665,769	-				+0.1
4,665,769	-				-2.1
4,665,769	-				-0.3
4,665,769	-				-0.8
4,665,769	-				+0.3
4,665,769	-				-0.1
4,665,769	-				-1.1
4,665,769	-				+0.7
4,665,769	-				-2.0
4,665,769	-				-0.3
4,665,769	-				-0.7
4,665,769	-				+0.2
4,665,769	-				+0.0
4,665,769	-				-1.4
4,665,769	-				-1.3
4,665,777	-				+0.4
4,665,777	-				-0.2
4,665,777	-				-0.7
4,665,830	-				+1.2
4,665,835	-				+1.0
4,665,835	-				+0.8
4,665,835	-				+0.4
4,665,835	-				-0.3
4,665,835	-				+0.8
4,665,840	-				+0.1
4,665,840	-				+1.2
4,665,840	-				+0.3
4,665,845	-				-0.8
4,665,845	-				+0.7
4,665,845	-				-0.1
4,665,845	-				-2.0
4,665,845	-				-0.4
4,665,951	-				+0.6
4,665,963	-				+0.4
4,665,976	+				-0.9
4,665,976	+				+0.9
4,665,977	-				-0.1
4,666,032	-		GFF4668	0.26	+0.6
4,666,058	+		GFF4668	0.35	+1.1
4,666,058	+		GFF4668	0.35	+0.3
4,666,058	+		GFF4668	0.35	+0.3
4,666,058	+		GFF4668	0.35	+0.3
4,666,058	+		GFF4668	0.35	+0.8
4,666,058	+		GFF4668	0.35	+1.3
4,666,058	+		GFF4668	0.35	+2.1
4,666,058	+		GFF4668	0.35	+0.3
4,666,058	+		GFF4668	0.35	+0.6
4,666,066	-		GFF4668	0.37	-0.2
4,666,066	-		GFF4668	0.37	-0.9
4,666,066	-		GFF4668	0.37	-0.6
4,666,066	-		GFF4668	0.37	+1.4
4,666,066	-		GFF4668	0.37	-0.6
4,666,066	-		GFF4668	0.37	+0.2
4,666,066	-		GFF4668	0.37	+1.1
4,666,066	-		GFF4668	0.37	+0.3
4,666,069	+		GFF4668	0.38	-0.1
4,666,077	-		GFF4668	0.41	-0.2
4,666,106	-		GFF4668	0.50	-0.5
4,666,106	-		GFF4668	0.50	-1.5
4,666,108	+		GFF4668	0.50	-2.4
4,666,118	+		GFF4668	0.53	-0.2
4,666,143	-		GFF4668	0.61	-0.1
4,666,200	+		GFF4668	0.79	-0.4
4,666,216	-		GFF4668	0.84	-1.6
4,666,219	-		GFF4668	0.85	-0.0
4,666,241	+				+0.4
4,666,242	-				-1.4
4,666,251	+				-1.4
4,666,318	+				-0.5
4,666,331	-				-0.3
4,666,331	-				+0.6
4,666,331	-				+1.2
4,666,335	+				+0.4
4,666,342	+				-0.0
4,666,345	+				-0.2
4,666,419	-		GFF4669	0.14	+0.1
4,666,419	-		GFF4669	0.14	-0.4
4,666,419	-		GFF4669	0.14	+0.6
4,666,419	-		GFF4669	0.14	+0.2
4,666,424	-		GFF4669	0.16	+1.0
4,666,431	-		GFF4669	0.19	+0.7
4,666,455	+		GFF4669	0.29	+0.8
4,666,462	-		GFF4669	0.31	-1.9
4,666,475	+		GFF4669	0.37	-0.5
4,666,475	+		GFF4669	0.37	+0.1
4,666,475	+		GFF4669	0.37	+0.6
4,666,554	+		GFF4669	0.68	-2.1
4,666,554	+		GFF4669	0.68	-0.1
4,666,554	+		GFF4669	0.68	+1.3
4,666,562	-		GFF4669	0.71	+0.6
4,666,562	-		GFF4669	0.71	+1.4
4,666,562	-		GFF4669	0.71	-0.2
4,666,562	-		GFF4669	0.71	-0.0
4,666,562	-		GFF4669	0.71	+0.4
4,666,574	+		GFF4669	0.76	+0.6
4,666,623	+				+1.2
4,666,655	-				+0.3
4,666,685	-				+1.1
4,666,724	-				-0.4
4,666,757	+		GFF4670	0.26	+0.9
4,666,787	-		GFF4670	0.41	+0.8
4,666,787	-		GFF4670	0.41	+0.3
4,666,789	+		GFF4670	0.42	-0.4
4,666,793	+		GFF4670	0.44	+1.5
4,666,793	+		GFF4670	0.44	-1.5
4,666,801	-		GFF4670	0.48	-0.1
4,666,801	-		GFF4670	0.48	-1.2
4,666,812	+		GFF4670	0.53	+0.6
4,666,852	+		GFF4670	0.73	-0.3
4,666,852	+		GFF4670	0.73	-1.8
4,666,852	+		GFF4670	0.73	+0.5
4,666,852	+		GFF4670	0.73	-1.2
4,666,852	+		GFF4670	0.73	+0.8
4,666,852	+		GFF4670	0.73	+0.2
4,666,852	+		GFF4670	0.73	+0.5
4,666,852	+		GFF4670	0.73	+0.1
4,666,852	+		GFF4670	0.73	-0.7
4,666,857	+		GFF4670	0.75	+0.2
4,666,858	+		GFF4670	0.75	+0.7
4,666,858	+		GFF4670	0.75	+0.3
4,666,858	+		GFF4670	0.75	+0.5
4,666,860	-		GFF4670	0.76	+0.4
4,666,860	-		GFF4670	0.76	+0.6
4,666,860	-		GFF4670	0.76	+1.1
4,666,860	-		GFF4670	0.76	-1.6
4,666,860	-		GFF4670	0.76	+1.1
4,666,860	-		GFF4670	0.76	-0.1
4,666,860	-		GFF4670	0.76	+1.0
4,666,860	-		GFF4670	0.76	+0.3
4,666,860	-		GFF4670	0.76	-0.9
4,666,860	-		GFF4670	0.76	+0.1
4,666,873	-		GFF4670	0.83	+0.3
4,666,876	+		GFF4670	0.84	-1.5
4,666,923	-				+0.1
4,666,925	+				+0.4
4,666,925	+				+1.1
4,666,925	+				-2.8
4,666,933	-				-1.2
4,666,933	-				+0.4
4,666,933	-				+1.7
4,666,946	-				+0.1
4,666,949	+				+1.7
4,666,949	+				-0.5
4,666,951	+				+0.6
4,666,965	+				-0.2
4,666,978	+				+0.5
4,666,983	-				+1.2
4,666,985	+				+1.1
4,666,986	-				+0.6
4,667,000	-				-0.4
4,667,102	-				+0.5
4,667,252	-		GFF4671	0.19	+0.4
4,667,252	-		GFF4671	0.19	+0.4
4,667,252	-		GFF4671	0.19	+0.6
4,667,252	-		GFF4671	0.19	+0.0
4,667,252	-		GFF4671	0.19	-0.4
4,667,252	-		GFF4671	0.19	+0.4
4,667,252	-		GFF4671	0.19	-0.7
4,667,292	+		GFF4671	0.24	-1.7
4,667,292	+		GFF4671	0.24	+1.2
4,667,292	+		GFF4671	0.24	-0.5
4,667,298	+		GFF4671	0.25	-0.1
4,667,300	-		GFF4671	0.26	-0.2
4,667,300	-		GFF4671	0.26	-0.3
4,667,306	-		GFF4671	0.26	-1.2
4,667,319	+		GFF4671	0.28	-0.9
4,667,327	-		GFF4671	0.29	+0.3
4,667,341	+		GFF4671	0.31	+1.1
4,667,341	+		GFF4671	0.31	+0.5
4,667,341	-		GFF4671	0.31	+0.6
4,667,343	+		GFF4671	0.31	-1.6
4,667,343	+		GFF4671	0.31	+0.3
4,667,350	-		GFF4671	0.32	-0.0
4,667,351	-		GFF4671	0.33	+0.6
4,667,351	-		GFF4671	0.33	+0.1
4,667,355	-		GFF4671	0.33	+0.4
4,667,379	-		GFF4671	0.36	+0.8
4,667,379	-		GFF4671	0.36	+0.4
4,667,384	-		GFF4671	0.37	-0.6
4,667,384	-		GFF4671	0.37	-0.4
4,667,401	-		GFF4671	0.39	+1.3
4,667,402	+		GFF4671	0.39	-1.1
4,667,444	-		GFF4671	0.45	+0.5
4,667,444	-		GFF4671	0.45	+0.8
4,667,463	-		GFF4671	0.48	+0.4
4,667,472	+		GFF4671	0.49	-0.1
4,667,559	+		GFF4671	0.61	-1.4
4,667,582	+		GFF4671	0.64	+0.4
4,667,582	+		GFF4671	0.64	+0.2
4,667,590	-		GFF4671	0.65	-1.1
4,667,590	-		GFF4671	0.65	-0.3
4,667,590	-		GFF4671	0.65	-0.6
4,667,593	+		GFF4671	0.65	+0.9
4,667,642	-		GFF4671	0.72	+1.4
4,667,670	-		GFF4671	0.76	-0.4
4,667,710	+		GFF4671	0.81	+0.1
4,667,722	+		GFF4671	0.83	-0.9
4,667,742	+		GFF4671	0.86	+0.3
4,667,750	-		GFF4671	0.87	+0.3
4,667,750	-		GFF4671	0.87	+0.8
4,667,750	-		GFF4671	0.87	-0.8
4,667,750	-		GFF4671	0.87	+1.5
4,667,750	-		GFF4671	0.87	+0.1
4,667,758	-		GFF4671	0.88	-2.2
4,667,758	-		GFF4671	0.88	-1.9
4,667,765	-		GFF4671	0.89	+0.9
4,667,801	+				-0.1
4,667,802	+				-0.3
4,667,809	-				+0.8
4,667,809	-				+1.7
4,667,809	-				+0.3
4,667,839	-				+0.9
4,667,845	+				+1.4
4,667,845	+				-0.2
4,667,853	-				+1.0
4,667,853	-				+0.7
4,667,855	-				+0.5
4,667,863	-				-0.9
4,667,886	+				-0.6
4,667,886	+				-0.8
4,667,886	+				+0.4
4,667,886	+				+0.4
4,667,886	+				+0.2
4,667,894	-				-0.6
4,667,896	-				-0.8
4,667,905	+				+0.1