Strain Fitness in Sphingobium sp. HT1-2 around GFF4664

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,662,494	-		GFF4663	0.39	+0.6
4,662,496	-		GFF4663	0.39	+0.3
4,662,523	-		GFF4663	0.41	-0.7
4,662,523	-		GFF4663	0.41	-0.6
4,662,525	+		GFF4663	0.41	-0.5
4,662,535	+		GFF4663	0.41	+0.2
4,662,537	+		GFF4663	0.42	-0.7
4,662,537	+		GFF4663	0.42	-0.2
4,662,543	-		GFF4663	0.42	-2.6
4,662,550	+		GFF4663	0.42	+0.6
4,662,555	-		GFF4663	0.43	-0.5
4,662,562	-		GFF4663	0.43	-1.4
4,662,562	-		GFF4663	0.43	-0.7
4,662,570	+		GFF4663	0.44	-0.8
4,662,578	-		GFF4663	0.44	+0.2
4,662,578	-		GFF4663	0.44	-0.1
4,662,583	-		GFF4663	0.44	+0.1
4,662,583	-		GFF4663	0.44	+0.2
4,662,583	-		GFF4663	0.44	-0.6
4,662,594	-		GFF4663	0.45	-2.8
4,662,599	-		GFF4663	0.45	-0.3
4,662,606	+		GFF4663	0.46	-0.6
4,662,612	+		GFF4663	0.46	-1.7
4,662,613	+		GFF4663	0.46	-0.8
4,662,613	+		GFF4663	0.46	+0.3
4,662,613	+		GFF4663	0.46	+0.7
4,662,613	+		GFF4663	0.46	+1.1
4,662,613	+		GFF4663	0.46	-2.3
4,662,613	+		GFF4663	0.46	-1.1
4,662,613	+		GFF4663	0.46	+1.0
4,662,614	-		GFF4663	0.46	-0.1
4,662,614	-		GFF4663	0.46	+0.1
4,662,614	-		GFF4663	0.46	+0.8
4,662,620	-		GFF4663	0.47	+0.0
4,662,621	-		GFF4663	0.47	+0.4
4,662,621	-		GFF4663	0.47	-1.3
4,662,621	-		GFF4663	0.47	-0.8
4,662,621	-		GFF4663	0.47	-0.5
4,662,621	-		GFF4663	0.47	+1.4
4,662,621	-		GFF4663	0.47	-0.2
4,662,621	-		GFF4663	0.47	-0.4
4,662,621	-		GFF4663	0.47	-0.1
4,662,637	-		GFF4663	0.48	-0.3
4,662,642	-		GFF4663	0.48	-0.3
4,662,644	+		GFF4663	0.48	-1.4
4,662,649	+		GFF4663	0.49	-0.7
4,662,649	+		GFF4663	0.49	+1.1
4,662,657	-		GFF4663	0.49	-1.4
4,662,669	+		GFF4663	0.50	-1.3
4,662,669	+		GFF4663	0.50	-1.0
4,662,669	+		GFF4663	0.50	-2.4
4,662,707	+		GFF4663	0.52	+0.1
4,662,707	+		GFF4663	0.52	+0.1
4,662,708	+		GFF4663	0.52	-1.0
4,662,713	-		GFF4663	0.53	-1.1
4,662,715	-		GFF4663	0.53	-0.5
4,662,721	-		GFF4663	0.53	+0.8
4,662,726	-		GFF4663	0.54	-2.0
4,662,738	+		GFF4663	0.54	-0.4
4,662,748	+		GFF4663	0.55	-0.6
4,662,748	+		GFF4663	0.55	-0.8
4,662,748	+		GFF4663	0.55	+1.1
4,662,752	+		GFF4663	0.55	-0.7
4,662,752	+		GFF4663	0.55	-1.4
4,662,752	+		GFF4663	0.55	-0.2
4,662,754	-		GFF4663	0.55	-0.8
4,662,756	-		GFF4663	0.55	+0.2
4,662,756	-		GFF4663	0.55	+1.0
4,662,760	-		GFF4663	0.56	-1.7
4,662,760	-		GFF4663	0.56	+0.5
4,662,770	+		GFF4663	0.56	-0.5
4,662,775	+		GFF4663	0.57	+0.6
4,662,778	-		GFF4663	0.57	-0.2
4,662,778	-		GFF4663	0.57	-0.2
4,662,778	-		GFF4663	0.57	+0.3
4,662,779	+		GFF4663	0.57	+0.7
4,662,792	+		GFF4663	0.58	-0.5
4,662,792	+		GFF4663	0.58	+0.6
4,662,794	-		GFF4663	0.58	+0.3
4,662,795	-		GFF4663	0.58	-1.1
4,662,795	-		GFF4663	0.58	+0.7
4,662,802	+		GFF4663	0.58	-1.3
4,662,802	+		GFF4663	0.58	+1.0
4,662,802	+		GFF4663	0.58	-0.0
4,662,807	+		GFF4663	0.59	-0.5
4,662,807	+		GFF4663	0.59	+0.9
4,662,807	+		GFF4663	0.59	-1.4
4,662,807	+		GFF4663	0.59	+0.7
4,662,807	+		GFF4663	0.59	-0.1
4,662,807	+		GFF4663	0.59	+0.1
4,662,807	+		GFF4663	0.59	-1.6
4,662,807	+		GFF4663	0.59	+0.4
4,662,807	+		GFF4663	0.59	-0.5
4,662,807	+		GFF4663	0.59	+0.2
4,662,807	+		GFF4663	0.59	+0.5
4,662,810	-		GFF4663	0.59	+0.8
4,662,810	-		GFF4663	0.59	-0.7
4,662,810	-		GFF4663	0.59	+0.1
4,662,810	-		GFF4663	0.59	-1.0
4,662,810	-		GFF4663	0.59	+0.4
4,662,815	-		GFF4663	0.59	-0.7
4,662,815	-		GFF4663	0.59	+0.6
4,662,815	-		GFF4663	0.59	-2.2
4,662,815	-		GFF4663	0.59	+0.7
4,662,815	-		GFF4663	0.59	-1.8
4,662,815	-		GFF4663	0.59	-0.1
4,662,815	-		GFF4663	0.59	+0.3
4,662,815	-		GFF4663	0.59	-2.3
4,662,815	-		GFF4663	0.59	+0.2
4,662,815	-		GFF4663	0.59	-0.1
4,662,815	-		GFF4663	0.59	+0.5
4,662,815	-		GFF4663	0.59	-0.2
4,662,817	+		GFF4663	0.59	-0.8
4,662,817	+		GFF4663	0.59	+0.7
4,662,844	-		GFF4663	0.61	-0.4
4,662,849	-		GFF4663	0.61	-0.9
4,662,852	+		GFF4663	0.62	+1.2
4,662,857	+		GFF4663	0.62	-0.7
4,662,860	+		GFF4663	0.62	-1.6
4,662,875	-		GFF4663	0.63	-0.1
4,662,875	-		GFF4663	0.63	-0.3
4,662,879	+		GFF4663	0.63	+1.1
4,662,913	-		GFF4663	0.65	-0.8
4,662,919	+		GFF4663	0.66	-0.7
4,662,927	-		GFF4663	0.66	-1.9
4,662,951	+		GFF4663	0.68	-1.6
4,662,951	+		GFF4663	0.68	+0.1
4,662,959	-		GFF4663	0.68	-0.9
4,662,959	-		GFF4663	0.68	-2.6
4,662,959	-		GFF4663	0.68	-1.9
4,662,959	-		GFF4663	0.68	+1.1
4,662,959	-		GFF4663	0.68	+0.6
4,662,959	-		GFF4663	0.68	+1.2
4,662,966	+		GFF4663	0.69	+0.3
4,662,967	+		GFF4663	0.69	+1.0
4,662,974	-		GFF4663	0.69	-0.9
4,662,975	-		GFF4663	0.69	-2.9
4,662,980	+		GFF4663	0.70	+0.6
4,662,980	+		GFF4663	0.70	-0.6
4,662,988	+		GFF4663	0.70	-0.0
4,662,988	+		GFF4663	0.70	-0.8
4,662,990	+		GFF4663	0.70	-0.2
4,662,995	-		GFF4663	0.71	-0.2
4,662,996	-		GFF4663	0.71	-0.3
4,662,996	-		GFF4663	0.71	-0.4
4,663,001	-		GFF4663	0.71	-0.2
4,663,008	-		GFF4663	0.71	-0.7
4,663,008	-		GFF4663	0.71	-0.1
4,663,008	-		GFF4663	0.71	-0.6
4,663,008	-		GFF4663	0.71	+0.3
4,663,013	+		GFF4663	0.72	-0.3
4,663,013	+		GFF4663	0.72	-0.9
4,663,019	-		GFF4663	0.72	-1.9
4,663,024	+		GFF4663	0.72	-0.2
4,663,027	-		GFF4663	0.73	-0.5
4,663,040	-		GFF4663	0.73	+0.5
4,663,040	-		GFF4663	0.73	+1.0
4,663,040	-		GFF4663	0.73	+0.3
4,663,042	-		GFF4663	0.74	-0.9
4,663,046	+		GFF4663	0.74	-1.1
4,663,046	-		GFF4663	0.74	+0.2
4,663,046	-		GFF4663	0.74	-0.6
4,663,046	-		GFF4663	0.74	+1.3
4,663,046	-		GFF4663	0.74	-1.2
4,663,054	-		GFF4663	0.74	+1.0
4,663,057	+		GFF4663	0.75	+0.3
4,663,057	+		GFF4663	0.75	+0.3
4,663,058	+		GFF4663	0.75	-1.5
4,663,060	-		GFF4663	0.75	-0.8
4,663,065	-		GFF4663	0.75	-2.1
4,663,065	-		GFF4663	0.75	-0.6
4,663,065	-		GFF4663	0.75	-1.9
4,663,065	-		GFF4663	0.75	-1.0
4,663,065	-		GFF4663	0.75	+0.2
4,663,070	-		GFF4663	0.75	-0.1
4,663,088	+		GFF4663	0.77	-0.6
4,663,088	+		GFF4663	0.77	-1.4
4,663,125	-		GFF4663	0.79	+0.2
4,663,137	+		GFF4663	0.80	+0.3
4,663,140	-		GFF4663	0.80	+0.4
4,663,147	+		GFF4663	0.80	-0.0
4,663,147	+		GFF4663	0.80	+0.1
4,663,147	-		GFF4663	0.80	-0.8
4,663,155	-		GFF4663	0.81	-2.3
4,663,155	-		GFF4663	0.81	-2.6
4,663,155	-		GFF4663	0.81	+0.1
4,663,155	-		GFF4663	0.81	-0.4
4,663,155	-		GFF4663	0.81	+0.9
4,663,155	-		GFF4663	0.81	-1.7
4,663,155	-		GFF4663	0.81	-0.2
4,663,160	+		GFF4663	0.81	-0.0
4,663,178	-		GFF4663	0.82	+0.2
4,663,178	-		GFF4663	0.82	-1.4
4,663,180	+		GFF4663	0.82	+0.2
4,663,180	-		GFF4663	0.82	-2.3
4,663,185	+		GFF4663	0.83	+0.9
4,663,185	+		GFF4663	0.83	-0.9
4,663,185	+		GFF4663	0.83	-0.6
4,663,185	+		GFF4663	0.83	+0.4
4,663,185	+		GFF4663	0.83	+0.2
4,663,185	+		GFF4663	0.83	-0.3
4,663,185	+		GFF4663	0.83	-0.2
4,663,190	+		GFF4663	0.83	-1.4
4,663,190	+		GFF4663	0.83	-0.9
4,663,193	-		GFF4663	0.83	+0.2
4,663,198	-		GFF4663	0.83	+1.1
4,663,198	-		GFF4663	0.83	-1.2
4,663,198	-		GFF4663	0.83	+0.3
4,663,217	+		GFF4663	0.85	+0.6
4,663,222	+		GFF4663	0.85	+1.1
4,663,232	+		GFF4663	0.86	-0.6
4,663,232	+		GFF4663	0.86	+0.8
4,663,237	+		GFF4663	0.86	-0.0
4,663,237	+		GFF4663	0.86	-0.2
4,663,237	+		GFF4663	0.86	+0.1
4,663,237	+		GFF4663	0.86	-0.7
4,663,240	-		GFF4663	0.86	+0.7
4,663,240	-		GFF4663	0.86	+0.8
4,663,245	-		GFF4663	0.86	-0.5
4,663,245	-		GFF4663	0.86	+0.4
4,663,245	-		GFF4663	0.86	-0.5
4,663,245	-		GFF4663	0.86	-0.1
4,663,247	+		GFF4663	0.87	-0.3
4,663,247	+		GFF4663	0.87	+0.6
4,663,247	+		GFF4663	0.87	-1.2
4,663,247	+		GFF4663	0.87	+0.5
4,663,255	-		GFF4663	0.87	-0.1
4,663,255	-		GFF4663	0.87	+0.1
4,663,255	-		GFF4663	0.87	-0.3
4,663,255	-		GFF4663	0.87	-1.1
4,663,260	+		GFF4663	0.87	-1.1
4,663,268	-		GFF4663	0.88	-0.0
4,663,282	+		GFF4663	0.89	-0.1
4,663,289	-		GFF4663	0.89	+0.3
4,663,294	+		GFF4663	0.90	+1.2
4,663,294	+		GFF4663	0.90	+0.2
4,663,304	+				+0.6
4,663,320	+				+0.1
4,663,321	+				+0.0
4,663,338	+				+0.1
4,663,344	-				-0.2
4,663,344	-				+0.7
4,663,346	-				-1.1
4,663,351	+				+1.1
4,663,351	+				-0.8
4,663,356	+				+0.1
4,663,356	+				+0.2
4,663,359	-				+0.3
4,663,359	-				+0.5
4,663,359	-				-1.4
4,663,363	+				-1.4
4,663,364	-				-0.1
4,663,364	-				-1.4
4,663,366	-				-0.8
4,663,387	+				+1.0
4,663,392	+				-0.9
4,663,395	-				+0.4
4,663,397	+				-1.7
4,663,397	+				+0.7
4,663,397	+				-1.6
4,663,397	+				+1.0
4,663,397	+				-0.2
4,663,397	+				+1.0
4,663,397	+				+0.5
4,663,397	+				-0.7
4,663,397	+				-0.7
4,663,397	+				-0.0
4,663,405	-				+0.5
4,663,405	-				+0.1
4,663,405	-				-0.1
4,663,405	-				-1.7
4,663,405	-				+0.6
4,663,405	-				-0.4
4,663,405	-				-1.0
4,663,405	-				-1.6
4,663,405	-				-1.1
4,663,405	-				-0.2
4,663,405	-				+1.8
4,663,405	-				+0.2
4,663,405	-				-0.8
4,663,405	-				+0.9
4,663,405	-				-0.3
4,663,405	-				+0.8
4,663,405	-				-0.4
4,663,405	-				+1.1
4,663,405	-				-0.8
4,663,418	-				+0.5
4,663,421	+				-0.4
4,663,426	-				-0.5
4,663,429	-				-0.4
4,663,432	+				+0.7
4,663,444	+				-1.6
4,663,452	-				+0.9
4,663,455	+				-2.1
4,663,455	-				-0.4
4,663,463	+				-0.3
4,663,476	+				+0.1
4,663,476	+				-0.3
4,663,476	+				+0.9
4,663,476	+				+0.1
4,663,476	+				+0.9
4,663,484	-				+0.1
4,663,484	-				-0.1
4,663,484	-				-0.4
4,663,484	-				-0.4
4,663,484	-				-0.7
4,663,501	+				-0.6
4,663,516	-				+0.5
4,663,517	+				-0.2
4,663,530	+		GFF4664	0.11	-0.8
4,663,533	+		GFF4664	0.12	+0.7
4,663,533	+		GFF4664	0.12	-1.3
4,663,534	-		GFF4664	0.13	-0.5
4,663,541	-		GFF4664	0.15	+0.1
4,663,541	-		GFF4664	0.15	+1.2
4,663,541	-		GFF4664	0.15	+0.8
4,663,541	-		GFF4664	0.15	-0.6
4,663,542	+		GFF4664	0.15	-0.5
4,663,542	+		GFF4664	0.15	-0.1
4,663,543	+		GFF4664	0.15	-0.2
4,663,543	+		GFF4664	0.15	+0.6
4,663,543	+		GFF4664	0.15	+1.2
4,663,543	+		GFF4664	0.15	-0.8
4,663,543	+		GFF4664	0.15	+0.4
4,663,543	+		GFF4664	0.15	-0.7
4,663,550	-		GFF4664	0.17	+0.6
4,663,551	-		GFF4664	0.17	-1.7
4,663,552	+		GFF4664	0.18	+1.2
4,663,552	+		GFF4664	0.18	-0.4
4,663,552	+		GFF4664	0.18	+0.2
4,663,558	-		GFF4664	0.19	-0.7
4,663,560	-		GFF4664	0.20	-1.8
4,663,560	-		GFF4664	0.20	-0.3
4,663,560	-		GFF4664	0.20	-0.1
4,663,560	-		GFF4664	0.20	-0.6
4,663,560	-		GFF4664	0.20	-0.7
4,663,575	-		GFF4664	0.24	+1.6
4,663,575	-		GFF4664	0.24	-0.0
4,663,575	-		GFF4664	0.24	-0.2
4,663,575	-		GFF4664	0.24	+0.8
4,663,595	-		GFF4664	0.30	-0.0
4,663,597	+		GFF4664	0.30	-2.5
4,663,597	+		GFF4664	0.30	-0.5
4,663,597	+		GFF4664	0.30	-1.1
4,663,600	-		GFF4664	0.31	-0.4
4,663,605	-		GFF4664	0.32	+0.2
4,663,605	-		GFF4664	0.32	+0.3
4,663,605	-		GFF4664	0.32	-0.8
4,663,607	-		GFF4664	0.33	-1.1
4,663,612	-		GFF4664	0.34	-0.9
4,663,614	+		GFF4664	0.35	-1.8
4,663,614	+		GFF4664	0.35	+1.1
4,663,629	+		GFF4664	0.39	+0.3
4,663,632	-		GFF4664	0.40	+0.1
4,663,632	-		GFF4664	0.40	-0.7
4,663,637	+		GFF4664	0.41	+0.4
4,663,637	-		GFF4664	0.41	+1.2
4,663,637	-		GFF4664	0.41	-0.1
4,663,637	-		GFF4664	0.41	+0.7
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