Strain Fitness in Sphingobium sp. HT1-2 around GFF4636

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,634,821	-		GFF4635	0.27	-0.8
4,634,821	-		GFF4635	0.27	+0.9
4,634,821	-		GFF4635	0.27	-0.1
4,634,821	-		GFF4635	0.27	-0.9
4,634,821	-		GFF4635	0.27	+0.7
4,634,845	-		GFF4635	0.29	-0.3
4,634,855	-		GFF4635	0.30	+0.9
4,634,867	+		GFF4635	0.31	-0.1
4,634,876	-		GFF4635	0.32	-0.5
4,634,882	-		GFF4635	0.32	+0.0
4,634,893	+		GFF4635	0.33	-0.7
4,634,896	-		GFF4635	0.34	+0.0
4,634,896	-		GFF4635	0.34	-0.5
4,634,914	+		GFF4635	0.35	-0.8
4,634,917	+		GFF4635	0.36	-0.2
4,634,925	-		GFF4635	0.36	-0.3
4,634,925	-		GFF4635	0.36	-0.2
4,634,939	-		GFF4635	0.38	-0.4
4,635,017	+		GFF4635	0.45	-0.6
4,635,018	+		GFF4635	0.45	-1.4
4,635,018	+		GFF4635	0.45	-1.3
4,635,022	+		GFF4635	0.45	+0.2
4,635,024	-		GFF4635	0.45	-1.0
4,635,027	+		GFF4635	0.46	+1.2
4,635,040	+		GFF4635	0.47	+0.6
4,635,041	+		GFF4635	0.47	-0.8
4,635,049	-		GFF4635	0.48	+0.2
4,635,049	-		GFF4635	0.48	+0.2
4,635,053	-		GFF4635	0.48	-1.0
4,635,053	-		GFF4635	0.48	+0.3
4,635,071	+		GFF4635	0.50	-1.1
4,635,071	+		GFF4635	0.50	-1.0
4,635,093	-		GFF4635	0.52	-0.5
4,635,095	+		GFF4635	0.52	-1.3
4,635,114	+		GFF4635	0.54	-0.6
4,635,118	-		GFF4635	0.54	+0.6
4,635,125	+		GFF4635	0.55	-0.8
4,635,159	+		GFF4635	0.58	-0.4
4,635,163	+		GFF4635	0.58	-0.7
4,635,163	+		GFF4635	0.58	-0.7
4,635,164	+		GFF4635	0.58	-0.7
4,635,169	+		GFF4635	0.59	-2.4
4,635,172	-		GFF4635	0.59	-0.3
4,635,177	+		GFF4635	0.59	-1.2
4,635,177	+		GFF4635	0.59	-0.4
4,635,177	+		GFF4635	0.59	+0.1
4,635,177	+		GFF4635	0.59	-0.0
4,635,177	-		GFF4635	0.59	-0.4
4,635,182	-		GFF4635	0.60	+0.4
4,635,239	-		GFF4635	0.65	-1.3
4,635,241	+		GFF4635	0.65	-0.4
4,635,249	-		GFF4635	0.66	+0.1
4,635,274	-		GFF4635	0.68	-0.6
4,635,295	-		GFF4635	0.70	+0.8
4,635,298	+		GFF4635	0.71	+0.3
4,635,298	+		GFF4635	0.71	-2.2
4,635,303	-		GFF4635	0.71	-0.8
4,635,307	-		GFF4635	0.71	+0.2
4,635,352	-		GFF4635	0.76	+0.1
4,635,381	+		GFF4635	0.78	-0.0
4,635,381	+		GFF4635	0.78	-0.5
4,635,389	-		GFF4635	0.79	-1.7
4,635,423	+		GFF4635	0.82	+1.3
4,635,424	-		GFF4635	0.82	-0.7
4,635,424	-		GFF4635	0.82	-0.4
4,635,424	-		GFF4635	0.82	-0.8
4,635,424	-		GFF4635	0.82	-0.6
4,635,447	+		GFF4635	0.84	-0.2
4,635,452	+		GFF4635	0.85	-2.8
4,635,455	-		GFF4635	0.85	-0.6
4,635,455	-		GFF4635	0.85	-1.2
4,635,455	-		GFF4635	0.85	-1.6
4,635,460	-		GFF4635	0.86	+1.1
4,635,460	-		GFF4635	0.86	-1.4
4,635,460	-		GFF4635	0.86	+0.3
4,635,460	-		GFF4635	0.86	-1.3
4,635,460	-		GFF4635	0.86	-1.4
4,635,460	-		GFF4635	0.86	-0.8
4,635,460	-		GFF4635	0.86	+0.5
4,635,465	+		GFF4635	0.86	-1.1
4,635,466	+		GFF4635	0.86	-1.4
4,635,466	-		GFF4635	0.86	-1.5
4,635,473	+		GFF4635	0.87	-0.3
4,635,474	-		GFF4635	0.87	-0.2
4,635,474	-		GFF4635	0.87	+0.5
4,635,474	-		GFF4635	0.87	-1.8
4,635,474	-		GFF4635	0.87	-2.6
4,635,474	-		GFF4635	0.87	-1.6
4,635,485	-		GFF4635	0.88	+1.3
4,635,492	+		GFF4635	0.88	-2.6
4,635,510	+				-0.8
4,635,518	-				-1.5
4,635,518	-				-2.2
4,635,518	-				+0.0
4,635,523	+				+0.0
4,635,546	-				-0.1
4,635,590	+				-0.4
4,635,617	+				-1.3
4,635,630	+				-0.1
4,635,633	-				-2.0
4,635,638	-				-2.3
4,635,660	+				-1.6
4,635,662	+				-0.1
4,635,666	-				-1.6
4,635,666	-				+1.0
4,635,666	-				-1.0
4,635,668	-				-0.5
4,635,670	-				-0.3
4,635,677	+				-0.4
4,635,677	+				+0.1
4,635,677	+				-0.3
4,635,685	-				-0.2
4,635,685	-				+0.7
4,635,708	-				+0.7
4,635,713	-				-2.1
4,635,717	-				+0.8
4,635,720	+				+1.5
4,635,720	+				-1.1
4,635,728	-				-1.9
4,635,728	-				-0.8
4,635,730	+				-1.6
4,635,779	+				+0.1
4,635,779	+				-1.8
4,635,779	+				-0.3
4,635,779	+				-0.6
4,635,779	+				-1.8
4,635,779	+				-0.4
4,635,779	+				-0.5
4,635,779	+				-0.6
4,635,782	-				-2.0
4,635,784	+				-0.4
4,635,787	-				-0.6
4,635,787	-				-0.5
4,635,787	-				-0.4
4,635,787	-				-0.1
4,635,787	-				-0.8
4,635,797	-				-2.0
4,635,803	+				-0.8
4,635,818	+				-0.3
4,635,820	-				-1.3
4,635,833	+				-1.8
4,635,860	+				+0.3
4,635,865	+				-0.4
4,635,865	+				+0.1
4,635,868	-				-1.1
4,635,873	-				+0.1
4,635,873	-				-1.4
4,635,873	-				-1.5
4,635,885	+				-0.1
4,635,917	+		GFF4636	0.13	-2.5
4,635,952	-		GFF4636	0.18	+0.5
4,635,957	+		GFF4636	0.18	+1.1
4,635,985	+		GFF4636	0.22	-0.4
4,635,990	+		GFF4636	0.23	-1.3
4,635,990	+		GFF4636	0.23	+0.6
4,635,993	-		GFF4636	0.23	+1.4
4,635,993	-		GFF4636	0.23	-0.6
4,635,995	+		GFF4636	0.23	-0.2
4,635,997	+		GFF4636	0.24	-0.4
4,635,998	-		GFF4636	0.24	+1.2
4,636,002	+		GFF4636	0.24	-0.3
4,636,003	-		GFF4636	0.24	+0.3
4,636,005	-		GFF4636	0.25	-1.9
4,636,034	-		GFF4636	0.28	-1.6
4,636,052	+		GFF4636	0.31	+0.6
4,636,059	+		GFF4636	0.32	+0.8
4,636,059	+		GFF4636	0.32	+0.5
4,636,059	+		GFF4636	0.32	-1.2
4,636,059	+		GFF4636	0.32	+1.2
4,636,059	+		GFF4636	0.32	+0.5
4,636,059	+		GFF4636	0.32	-1.8
4,636,059	+		GFF4636	0.32	-0.6
4,636,067	-		GFF4636	0.33	-2.1
4,636,077	-		GFF4636	0.34	-2.8
4,636,092	-		GFF4636	0.36	-0.9
4,636,122	+		GFF4636	0.40	+0.5
4,636,134	-		GFF4636	0.41	-2.6
4,636,135	-		GFF4636	0.42	-0.1
4,636,135	-		GFF4636	0.42	-1.2
4,636,135	-		GFF4636	0.42	-0.0
4,636,141	-		GFF4636	0.42	+0.1
4,636,172	-		GFF4636	0.46	-1.0
4,636,172	-		GFF4636	0.46	-0.5
4,636,189	+		GFF4636	0.49	+0.2
4,636,191	+		GFF4636	0.49	-0.1
4,636,191	+		GFF4636	0.49	-0.7
4,636,191	+		GFF4636	0.49	-0.3
4,636,199	+		GFF4636	0.50	-1.2
4,636,199	-		GFF4636	0.50	+0.1
4,636,199	-		GFF4636	0.50	+0.6
4,636,199	-		GFF4636	0.50	-0.0
4,636,199	-		GFF4636	0.50	+0.6
4,636,207	-		GFF4636	0.51	-0.5
4,636,207	-		GFF4636	0.51	-0.2
4,636,268	+		GFF4636	0.59	-0.1
4,636,290	+		GFF4636	0.62	-1.7
4,636,302	+		GFF4636	0.63	-1.9
4,636,310	-		GFF4636	0.64	-1.2
4,636,310	-		GFF4636	0.64	+0.1
4,636,312	+		GFF4636	0.64	+1.1
4,636,312	+		GFF4636	0.64	+0.4
4,636,312	+		GFF4636	0.64	+0.2
4,636,320	-		GFF4636	0.65	-0.9
4,636,320	-		GFF4636	0.65	-1.2
4,636,326	+		GFF4636	0.66	-1.6
4,636,332	-		GFF4636	0.67	+0.4
4,636,332	-		GFF4636	0.67	-0.1
4,636,334	-		GFF4636	0.67	-0.4
4,636,347	-		GFF4636	0.69	+0.2
4,636,355	-		GFF4636	0.70	-0.2
4,636,357	+		GFF4636	0.70	+0.2
4,636,392	-		GFF4636	0.75	-0.6
4,636,395	-		GFF4636	0.75	+0.1
4,636,395	-		GFF4636	0.75	+0.9
4,636,406	+		GFF4636	0.77	+0.1
4,636,416	+		GFF4636	0.78	-0.5
4,636,416	+		GFF4636	0.78	-1.2
4,636,419	-		GFF4636	0.78	-0.5
4,636,424	-		GFF4636	0.79	-0.5
4,636,424	-		GFF4636	0.79	+0.4
4,636,428	-		GFF4636	0.80	+0.3
4,636,433	+		GFF4636	0.80	+0.9
4,636,443	-		GFF4636	0.81	-1.5
4,636,455	+		GFF4636	0.83	+0.9
4,636,467	+		GFF4636	0.85	+0.1
4,636,500	+		GFF4636	0.89	-1.6
4,636,506	+		GFF4636	0.90	+0.3
4,636,506	+		GFF4636	0.90	-0.7
4,636,506	+		GFF4636	0.90	+0.5
4,636,506	+		GFF4636	0.90	-2.3
4,636,506	+		GFF4636	0.90	+0.2
4,636,506	+		GFF4636	0.90	-0.2
4,636,508	-		GFF4636	0.90	-0.8
4,636,511	+				-1.0
4,636,514	-				-0.2
4,636,514	-				-0.5
4,636,514	-				-1.3
4,636,514	-				-2.3
4,636,514	-				-0.4
4,636,514	-				-0.6
4,636,514	-				+0.1
4,636,514	-				-0.6
4,636,514	-				-0.7
4,636,514	-				-1.3
4,636,529	+				+0.4
4,636,531	-				-1.8
4,636,537	-				+0.3
4,636,577	-				+0.4
4,636,579	+				+1.1
4,636,579	+				+0.5
4,636,579	+				-2.5
4,636,607	+				-0.5
4,636,607	+				-0.9
4,636,607	+				-0.0
4,636,620	-				-0.6
4,636,622	+				-1.3
4,636,622	+				+1.0
4,636,630	-				-1.4
4,636,630	-				-0.8
4,636,656	-				-0.4
4,636,658	+				-1.3
4,636,667	-				-2.3
4,636,673	-				-0.3
4,636,673	-				-0.2
4,636,673	-				-0.8
4,636,694	-				+0.1
4,636,700	-				-1.4
4,636,708	+				-0.0
4,636,724	+		GFF4637	0.10	+0.6
4,636,732	-		GFF4637	0.11	-1.9
4,636,732	-		GFF4637	0.11	-0.2
4,636,749	+		GFF4637	0.12	-0.8
4,636,763	+		GFF4637	0.13	+0.3
4,636,763	+		GFF4637	0.13	+0.4
4,636,763	+		GFF4637	0.13	+0.5
4,636,763	+		GFF4637	0.13	+0.8
4,636,771	-		GFF4637	0.14	-0.5
4,636,771	-		GFF4637	0.14	-0.9
4,636,796	-		GFF4637	0.16	-0.6
4,636,801	-		GFF4637	0.16	-0.0
4,636,843	+		GFF4637	0.19	+0.8
4,636,851	-		GFF4637	0.20	-1.4
4,636,863	+		GFF4637	0.21	+0.1
4,636,863	+		GFF4637	0.21	+0.2
4,636,863	+		GFF4637	0.21	-0.6
4,636,863	+		GFF4637	0.21	+0.6
4,636,871	-		GFF4637	0.21	+0.5
4,636,873	+		GFF4637	0.21	+0.5
4,636,881	-		GFF4637	0.22	+0.6
4,636,937	+		GFF4637	0.26	-0.8
4,636,945	-		GFF4637	0.27	-1.7
4,636,953	-		GFF4637	0.27	-0.6
4,636,953	-		GFF4637	0.27	+0.4
4,636,963	-		GFF4637	0.28	-0.9
4,636,971	-		GFF4637	0.29	-0.3
4,636,983	+		GFF4637	0.30	-0.5
4,636,987	+		GFF4637	0.30	-0.1
4,636,995	-		GFF4637	0.31	+0.0
4,637,010	+		GFF4637	0.32	-0.4
4,637,018	+		GFF4637	0.32	+0.6
4,637,071	+		GFF4637	0.36	+1.8
4,637,078	+		GFF4637	0.37	-1.5
4,637,078	+		GFF4637	0.37	-0.5
4,637,078	+		GFF4637	0.37	+1.0
4,637,078	+		GFF4637	0.37	-0.2
4,637,078	+		GFF4637	0.37	+1.1
4,637,078	+		GFF4637	0.37	+0.3
4,637,078	+		GFF4637	0.37	+0.5
4,637,079	-		GFF4637	0.37	-0.8
4,637,086	-		GFF4637	0.37	-0.4
4,637,086	-		GFF4637	0.37	+0.4
4,637,086	-		GFF4637	0.37	-2.8
4,637,086	-		GFF4637	0.37	+0.1
4,637,086	-		GFF4637	0.37	-1.1
4,637,086	-		GFF4637	0.37	+0.4
4,637,086	-		GFF4637	0.37	+0.0
4,637,087	-		GFF4637	0.38	+0.1
4,637,121	-		GFF4637	0.40	-1.5
4,637,128	+		GFF4637	0.41	-1.1
4,637,128	+		GFF4637	0.41	-0.4
4,637,137	+		GFF4637	0.41	-0.1
4,637,146	-		GFF4637	0.42	+0.1
4,637,146	-		GFF4637	0.42	-2.3
4,637,150	-		GFF4637	0.42	-2.1
4,637,160	-		GFF4637	0.43	+0.1
4,637,162	+		GFF4637	0.43	-1.8
4,637,195	-		GFF4637	0.46	+1.2
4,637,203	-		GFF4637	0.46	-1.0
4,637,213	+		GFF4637	0.47	-1.1
4,637,213	-		GFF4637	0.47	+0.9
4,637,217	+		GFF4637	0.47	+0.2
4,637,217	+		GFF4637	0.47	-0.9
4,637,217	+		GFF4637	0.47	+0.9
4,637,217	+		GFF4637	0.47	-0.0
4,637,225	-		GFF4637	0.48	-2.1
4,637,225	-		GFF4637	0.48	+0.6
4,637,264	+		GFF4637	0.51	+0.5
4,637,269	+		GFF4637	0.51	-1.2
4,637,269	+		GFF4637	0.51	-1.4
4,637,277	-		GFF4637	0.52	-1.9
4,637,277	-		GFF4637	0.52	-0.4
4,637,315	-		GFF4637	0.55	+0.4
4,637,320	-		GFF4637	0.55	+1.9
4,637,325	+		GFF4637	0.55	-0.5
4,637,341	+		GFF4637	0.57	+0.2
4,637,346	+		GFF4637	0.57	+0.6
4,637,346	+		GFF4637	0.57	+1.2
4,637,354	-		GFF4637	0.58	-3.4
4,637,354	-		GFF4637	0.58	+1.1
4,637,354	-		GFF4637	0.58	-0.7
4,637,379	+		GFF4637	0.59	-1.4
4,637,398	-		GFF4637	0.61	-0.9
4,637,400	+		GFF4637	0.61	+1.5
4,637,402	+		GFF4637	0.61	+0.2
4,637,412	+		GFF4637	0.62	-0.1
4,637,419	+		GFF4637	0.62	-0.9
4,637,419	+		GFF4637	0.62	-1.0
4,637,419	+		GFF4637	0.62	-0.4
4,637,468	+		GFF4637	0.66	-0.3
4,637,476	-		GFF4637	0.67	-3.0
4,637,510	-		GFF4637	0.69	-1.4
4,637,533	+		GFF4637	0.71	+0.1
4,637,547	+		GFF4637	0.72	-0.2
4,637,567	-		GFF4637	0.73	+0.1
4,637,572	+		GFF4637	0.74	+0.1