Strain Fitness in Sphingobium sp. HT1-2 around GFF4634

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,632,365	-		GFF4633	0.59	-1.6
4,632,390	+		GFF4633	0.60	+0.7
4,632,398	-		GFF4633	0.61	-1.8
4,632,398	-		GFF4633	0.61	-0.8
4,632,398	-		GFF4633	0.61	-0.8
4,632,404	+		GFF4633	0.61	+0.4
4,632,407	+		GFF4633	0.61	-2.2
4,632,420	-		GFF4633	0.61	+0.2
4,632,430	+		GFF4633	0.62	+0.7
4,632,430	+		GFF4633	0.62	-0.6
4,632,432	-		GFF4633	0.62	-1.6
4,632,468	+		GFF4633	0.63	-2.2
4,632,481	+		GFF4633	0.64	+1.5
4,632,481	+		GFF4633	0.64	+0.4
4,632,481	+		GFF4633	0.64	-1.2
4,632,489	-		GFF4633	0.64	-0.1
4,632,489	-		GFF4633	0.64	-0.1
4,632,489	-		GFF4633	0.64	-0.5
4,632,489	-		GFF4633	0.64	+0.3
4,632,489	-		GFF4633	0.64	-0.7
4,632,489	-		GFF4633	0.64	-0.0
4,632,489	-		GFF4633	0.64	+0.1
4,632,489	-		GFF4633	0.64	-0.1
4,632,491	+		GFF4633	0.64	-1.7
4,632,507	+		GFF4633	0.65	-1.1
4,632,507	+		GFF4633	0.65	+0.7
4,632,507	+		GFF4633	0.65	-0.3
4,632,515	-		GFF4633	0.65	-1.9
4,632,515	-		GFF4633	0.65	-0.1
4,632,515	-		GFF4633	0.65	-0.8
4,632,515	-		GFF4633	0.65	-0.1
4,632,520	-		GFF4633	0.66	-0.1
4,632,520	-		GFF4633	0.66	-0.7
4,632,520	-		GFF4633	0.66	-1.9
4,632,522	+		GFF4633	0.66	-1.5
4,632,530	-		GFF4633	0.66	-0.9
4,632,530	-		GFF4633	0.66	-0.8
4,632,535	-		GFF4633	0.66	-0.2
4,632,540	+		GFF4633	0.66	-0.3
4,632,544	+		GFF4633	0.67	-0.4
4,632,544	+		GFF4633	0.67	+0.1
4,632,544	+		GFF4633	0.67	-2.5
4,632,546	+		GFF4633	0.67	-0.1
4,632,546	+		GFF4633	0.67	-0.3
4,632,546	+		GFF4633	0.67	-0.4
4,632,546	+		GFF4633	0.67	-0.2
4,632,546	+		GFF4633	0.67	-1.0
4,632,546	+		GFF4633	0.67	+0.7
4,632,546	+		GFF4633	0.67	+0.7
4,632,546	+		GFF4633	0.67	-0.3
4,632,546	+		GFF4633	0.67	-0.8
4,632,546	+		GFF4633	0.67	-1.6
4,632,546	+		GFF4633	0.67	-0.6
4,632,546	+		GFF4633	0.67	-0.4
4,632,546	+		GFF4633	0.67	-2.6
4,632,546	+		GFF4633	0.67	-0.4
4,632,546	+		GFF4633	0.67	-1.2
4,632,546	+		GFF4633	0.67	-1.0
4,632,546	+		GFF4633	0.67	+0.1
4,632,546	+		GFF4633	0.67	-1.8
4,632,546	+		GFF4633	0.67	+0.7
4,632,546	+		GFF4633	0.67	+0.7
4,632,546	+		GFF4633	0.67	-1.3
4,632,546	+		GFF4633	0.67	-1.1
4,632,546	+		GFF4633	0.67	+0.8
4,632,546	+		GFF4633	0.67	-2.5
4,632,546	+		GFF4633	0.67	+0.0
4,632,546	+		GFF4633	0.67	+0.2
4,632,546	+		GFF4633	0.67	+0.5
4,632,546	+		GFF4633	0.67	+0.5
4,632,552	-		GFF4633	0.67	-1.0
4,632,554	-		GFF4633	0.67	-0.5
4,632,554	-		GFF4633	0.67	+0.4
4,632,554	-		GFF4633	0.67	-0.8
4,632,554	-		GFF4633	0.67	+0.6
4,632,554	-		GFF4633	0.67	-1.1
4,632,554	-		GFF4633	0.67	-0.2
4,632,554	-		GFF4633	0.67	-1.0
4,632,554	-		GFF4633	0.67	-1.4
4,632,554	-		GFF4633	0.67	+1.4
4,632,554	-		GFF4633	0.67	-1.1
4,632,554	-		GFF4633	0.67	-0.7
4,632,554	-		GFF4633	0.67	+0.8
4,632,554	-		GFF4633	0.67	-0.6
4,632,554	-		GFF4633	0.67	-0.9
4,632,554	-		GFF4633	0.67	+1.7
4,632,554	-		GFF4633	0.67	-0.9
4,632,554	-		GFF4633	0.67	-0.3
4,632,554	-		GFF4633	0.67	-1.4
4,632,554	-		GFF4633	0.67	+0.3
4,632,554	-		GFF4633	0.67	-1.6
4,632,554	-		GFF4633	0.67	+0.7
4,632,554	-		GFF4633	0.67	+0.1
4,632,554	-		GFF4633	0.67	+0.4
4,632,554	-		GFF4633	0.67	-0.4
4,632,554	-		GFF4633	0.67	-0.9
4,632,554	-		GFF4633	0.67	-0.0
4,632,554	-		GFF4633	0.67	-1.4
4,632,554	-		GFF4633	0.67	-0.3
4,632,556	+		GFF4633	0.67	-0.4
4,632,556	+		GFF4633	0.67	+0.3
4,632,556	+		GFF4633	0.67	-1.8
4,632,556	+		GFF4633	0.67	+0.2
4,632,561	+		GFF4633	0.67	-0.1
4,632,561	+		GFF4633	0.67	+0.1
4,632,561	+		GFF4633	0.67	-1.3
4,632,561	+		GFF4633	0.67	+1.1
4,632,561	+		GFF4633	0.67	+0.4
4,632,561	+		GFF4633	0.67	-1.0
4,632,561	+		GFF4633	0.67	-0.1
4,632,561	+		GFF4633	0.67	+0.3
4,632,564	-		GFF4633	0.67	-1.0
4,632,564	-		GFF4633	0.67	+0.6
4,632,564	-		GFF4633	0.67	-0.3
4,632,567	+		GFF4633	0.68	-0.3
4,632,569	-		GFF4633	0.68	-0.7
4,632,569	-		GFF4633	0.68	-1.3
4,632,569	-		GFF4633	0.68	-1.3
4,632,569	-		GFF4633	0.68	-2.5
4,632,569	-		GFF4633	0.68	+0.4
4,632,569	-		GFF4633	0.68	-0.8
4,632,569	-		GFF4633	0.68	-0.5
4,632,569	-		GFF4633	0.68	-1.0
4,632,569	-		GFF4633	0.68	-0.5
4,632,618	+		GFF4633	0.70	+0.6
4,632,628	+		GFF4633	0.70	-1.9
4,632,641	+		GFF4633	0.71	-0.4
4,632,649	-		GFF4633	0.71	+0.2
4,632,649	-		GFF4633	0.71	-1.9
4,632,650	+		GFF4633	0.71	+0.2
4,632,651	-		GFF4633	0.71	+0.9
4,632,658	-		GFF4633	0.71	+0.4
4,632,660	+		GFF4633	0.71	-0.3
4,632,660	-		GFF4633	0.71	-0.7
4,632,663	+		GFF4633	0.72	-1.3
4,632,672	-		GFF4633	0.72	+0.2
4,632,684	+		GFF4633	0.72	-0.8
4,632,692	-		GFF4633	0.73	-1.1
4,632,723	-		GFF4633	0.74	-0.4
4,632,750	+		GFF4633	0.75	-1.1
4,632,750	+		GFF4633	0.75	-1.6
4,632,786	-		GFF4633	0.77	+0.4
4,632,792	+		GFF4633	0.77	-0.1
4,632,823	+		GFF4633	0.78	-1.5
4,632,831	-		GFF4633	0.79	+0.1
4,632,831	-		GFF4633	0.79	-0.7
4,632,891	+		GFF4633	0.81	+0.2
4,632,897	+		GFF4633	0.81	+0.0
4,632,897	+		GFF4633	0.81	-0.8
4,632,897	+		GFF4633	0.81	-1.3
4,632,897	+		GFF4633	0.81	-0.2
4,632,897	-		GFF4633	0.81	-1.6
4,632,897	-		GFF4633	0.81	-0.6
4,632,898	+		GFF4633	0.81	-0.2
4,632,905	-		GFF4633	0.82	+0.0
4,632,905	-		GFF4633	0.82	-1.5
4,632,905	-		GFF4633	0.82	-0.5
4,632,905	-		GFF4633	0.82	-0.6
4,632,929	+		GFF4633	0.83	+0.2
4,632,929	+		GFF4633	0.83	-0.8
4,632,929	+		GFF4633	0.83	-0.9
4,632,937	-		GFF4633	0.83	-0.9
4,632,939	+		GFF4633	0.83	-0.1
4,632,943	-		GFF4633	0.83	-1.4
4,632,947	-		GFF4633	0.83	-2.2
4,632,947	-		GFF4633	0.83	+0.4
4,632,949	+		GFF4633	0.84	-1.9
4,632,952	-		GFF4633	0.84	-0.1
4,632,974	-		GFF4633	0.85	+0.5
4,632,975	+		GFF4633	0.85	-1.8
4,633,000	+		GFF4633	0.86	-0.6
4,633,001	+		GFF4633	0.86	-0.0
4,633,022	+		GFF4633	0.87	-0.3
4,633,024	+		GFF4633	0.87	+0.0
4,633,024	+		GFF4633	0.87	-1.8
4,633,032	-		GFF4633	0.87	+0.2
4,633,032	-		GFF4633	0.87	-0.9
4,633,032	-		GFF4633	0.87	-1.3
4,633,032	-		GFF4633	0.87	-2.6
4,633,041	+		GFF4633	0.87	-1.5
4,633,041	+		GFF4633	0.87	+0.8
4,633,041	+		GFF4633	0.87	-0.6
4,633,041	+		GFF4633	0.87	-2.2
4,633,049	-		GFF4633	0.88	-0.1
4,633,049	-		GFF4633	0.88	-0.5
4,633,049	-		GFF4633	0.88	-0.8
4,633,049	-		GFF4633	0.88	-1.9
4,633,051	+		GFF4633	0.88	-0.7
4,633,057	-		GFF4633	0.88	-0.6
4,633,061	+		GFF4633	0.88	-1.1
4,633,062	+		GFF4633	0.88	+0.3
4,633,093	+		GFF4633	0.90	-0.2
4,633,101	-		GFF4633	0.90	-0.4
4,633,112	-				+1.3
4,633,154	+				-0.8
4,633,154	+				-1.0
4,633,182	-				-2.0
4,633,182	-				-0.3
4,633,183	+				+0.7
4,633,220	+				-1.9
4,633,220	+				+0.4
4,633,247	-				-1.0
4,633,312	-				+0.0
4,633,316	+				-0.7
4,633,316	+				-0.8
4,633,317	-				+0.8
4,633,319	+				-0.4
4,633,319	-				+0.2
4,633,319	-				-1.6
4,633,326	+				-1.0
4,633,326	+				+1.3
4,633,326	+				+0.9
4,633,326	+				-2.1
4,633,331	+				-0.5
4,633,331	+				+0.4
4,633,331	+				-0.9
4,633,331	+				-0.5
4,633,334	-				-0.6
4,633,334	-				+0.4
4,633,334	-				+0.2
4,633,334	-				-0.5
4,633,334	-				-0.5
4,633,334	-				-1.0
4,633,334	-				+1.0
4,633,336	+				-0.3
4,633,336	+				-0.4
4,633,339	-				-0.2
4,633,339	-				-0.2
4,633,339	-				-1.9
4,633,339	-				-1.0
4,633,339	-				+0.9
4,633,339	-				-1.5
4,633,368	-				+0.3
4,633,370	+				-0.2
4,633,370	+				-1.2
4,633,386	+				+0.3
4,633,392	-				-0.4
4,633,423	+				-0.4
4,633,438	+				-2.8
4,633,453	-				-1.8
4,633,453	-				-1.4
4,633,466	+				-0.5
4,633,474	-				-0.6
4,633,474	-				+0.5
4,633,481	+				+0.1
4,633,482	+		GFF4634	0.10	-1.8
4,633,482	+		GFF4634	0.10	+0.1
4,633,482	+		GFF4634	0.10	-0.2
4,633,482	+		GFF4634	0.10	-0.3
4,633,482	+		GFF4634	0.10	-1.7
4,633,482	+		GFF4634	0.10	+0.5
4,633,482	+		GFF4634	0.10	-0.9
4,633,485	-		GFF4634	0.10	-0.3
4,633,485	-		GFF4634	0.10	-1.0
4,633,485	-		GFF4634	0.10	+0.1
4,633,487	+		GFF4634	0.10	+0.5
4,633,489	-		GFF4634	0.11	-1.2
4,633,489	-		GFF4634	0.11	+0.3
4,633,490	-		GFF4634	0.11	-1.0
4,633,490	-		GFF4634	0.11	+0.6
4,633,490	-		GFF4634	0.11	+0.1
4,633,490	-		GFF4634	0.11	-0.1
4,633,490	-		GFF4634	0.11	-0.9
4,633,490	-		GFF4634	0.11	-0.1
4,633,490	-		GFF4634	0.11	-2.4
4,633,490	-		GFF4634	0.11	-0.8
4,633,490	-		GFF4634	0.11	-0.2
4,633,490	-		GFF4634	0.11	-0.4
4,633,495	-		GFF4634	0.11	+0.2
4,633,510	-		GFF4634	0.12	-0.9
4,633,525	-		GFF4634	0.14	-0.0
4,633,552	+		GFF4634	0.16	+0.3
4,633,556	+		GFF4634	0.16	+0.6
4,633,576	+		GFF4634	0.18	+1.3
4,633,579	+		GFF4634	0.18	-0.7
4,633,581	+		GFF4634	0.18	-0.7
4,633,581	+		GFF4634	0.18	+0.2
4,633,581	+		GFF4634	0.18	-0.1
4,633,581	+		GFF4634	0.18	-2.8
4,633,581	+		GFF4634	0.18	+1.2
4,633,581	+		GFF4634	0.18	-1.0
4,633,581	+		GFF4634	0.18	-1.5
4,633,584	-		GFF4634	0.19	-0.4
4,633,584	-		GFF4634	0.19	-1.0
4,633,584	-		GFF4634	0.19	+0.0
4,633,586	+		GFF4634	0.19	-1.0
4,633,589	-		GFF4634	0.19	-2.4
4,633,589	-		GFF4634	0.19	-0.6
4,633,589	-		GFF4634	0.19	-1.5
4,633,589	-		GFF4634	0.19	+0.8
4,633,607	+		GFF4634	0.21	-0.6
4,633,665	+		GFF4634	0.26	-0.5
4,633,669	+		GFF4634	0.26	-1.6
4,633,671	+		GFF4634	0.26	+1.1
4,633,673	-		GFF4634	0.26	-2.4
4,633,678	-		GFF4634	0.27	-3.0
4,633,688	+		GFF4634	0.28	-1.0
4,633,690	+		GFF4634	0.28	-1.5
4,633,690	+		GFF4634	0.28	-1.6
4,633,717	-		GFF4634	0.30	-0.9
4,633,720	+		GFF4634	0.30	-2.2
4,633,741	+		GFF4634	0.32	+0.0
4,633,745	+		GFF4634	0.32	-1.3
4,633,749	-		GFF4634	0.33	-1.0
4,633,796	+		GFF4634	0.37	+0.5
4,633,814	-		GFF4634	0.38	+0.2
4,633,815	+		GFF4634	0.38	+0.2
4,633,815	+		GFF4634	0.38	-0.3
4,633,815	+		GFF4634	0.38	-1.2
4,633,815	+		GFF4634	0.38	-0.1
4,633,823	-		GFF4634	0.39	+1.6
4,633,823	-		GFF4634	0.39	-0.4
4,633,823	-		GFF4634	0.39	+0.3
4,633,823	-		GFF4634	0.39	-0.4
4,633,838	-		GFF4634	0.40	-0.1
4,633,860	-		GFF4634	0.42	-1.8
4,633,860	-		GFF4634	0.42	+0.2
4,633,860	-		GFF4634	0.42	-1.4
4,633,865	+		GFF4634	0.43	-1.9
4,633,879	+		GFF4634	0.44	-2.6
4,633,881	+		GFF4634	0.44	+0.8
4,633,881	+		GFF4634	0.44	-0.5
4,633,928	-		GFF4634	0.48	+0.2
4,633,930	+		GFF4634	0.48	-0.5
4,633,930	+		GFF4634	0.48	-0.2
4,633,952	+		GFF4634	0.50	-0.4
4,633,955	-		GFF4634	0.50	-2.0
4,633,955	-		GFF4634	0.50	+1.5
4,633,981	+		GFF4634	0.53	+1.0
4,633,986	+		GFF4634	0.53	-0.5
4,633,986	+		GFF4634	0.53	-0.2
4,634,018	+		GFF4634	0.56	-0.2
4,634,018	+		GFF4634	0.56	-0.5
4,634,018	+		GFF4634	0.56	-0.7
4,634,018	+		GFF4634	0.56	-1.9
4,634,026	-		GFF4634	0.56	-2.4
4,634,026	-		GFF4634	0.56	-1.1
4,634,026	-		GFF4634	0.56	-1.1
4,634,026	-		GFF4634	0.56	-0.1
4,634,026	-		GFF4634	0.56	+0.5
4,634,026	-		GFF4634	0.56	-0.2
4,634,045	-		GFF4634	0.58	-1.4
4,634,045	-		GFF4634	0.58	+1.4
4,634,067	-		GFF4634	0.60	-2.2
4,634,077	-		GFF4634	0.61	+0.3
4,634,081	+		GFF4634	0.61	-1.5
4,634,092	+		GFF4634	0.62	-0.3
4,634,094	+		GFF4634	0.62	+0.5
4,634,105	+		GFF4634	0.63	+0.2
4,634,138	+		GFF4634	0.66	-0.0
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4,634,212	-		GFF4634	0.72	-1.8
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4,634,248	-		GFF4634	0.75	-2.3
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4,634,299	+		GFF4634	0.80	-0.3
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4,634,370	-		GFF4634	0.86	-1.8
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4,634,456	+				+0.1
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4,634,475	+				+0.0
4,634,490	+				-1.0
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4,634,490	+				-0.5
4,634,490	+				-1.9
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4,634,498	-				-0.3
4,634,498	-				+0.1
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4,634,518	-				-1.4
4,634,543	-				-0.8
4,634,581	+				-2.7
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4,634,617	+				-1.3
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4,634,625	+				+0.1
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4,634,633	-				-2.1
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4,634,813	+		GFF4635	0.26	+0.8
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4,635,018	+		GFF4635	0.45	-1.4
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4,635,095	+		GFF4635	0.52	-1.3
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4,635,177	+		GFF4635	0.59	+0.1
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4,635,474	-		GFF4635	0.87	-1.8
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4,635,474	-		GFF4635	0.87	-1.6
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4,635,518	-				-2.2
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