Strain Fitness in Sphingobium sp. HT1-2 around GFF4630

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,625,813	+		GFF4628	0.50	-1.1
4,625,813	+		GFF4628	0.50	-0.3
4,625,813	+		GFF4628	0.50	-1.6
4,625,821	-		GFF4628	0.50	+0.2
4,625,821	-		GFF4628	0.50	+0.1
4,625,821	-		GFF4628	0.50	+1.0
4,625,821	-		GFF4628	0.50	-0.6
4,625,823	+		GFF4628	0.50	-0.4
4,625,823	+		GFF4628	0.50	+0.6
4,625,831	-		GFF4628	0.51	-1.5
4,625,833	+		GFF4628	0.51	-0.2
4,625,836	+		GFF4628	0.51	-1.2
4,625,841	-		GFF4628	0.52	-0.1
4,625,844	-		GFF4628	0.52	-2.8
4,625,849	+		GFF4628	0.52	+0.6
4,625,859	+		GFF4628	0.53	-0.4
4,625,878	-		GFF4628	0.54	-0.9
4,625,887	-		GFF4628	0.55	-0.4
4,625,912	+		GFF4628	0.57	+0.0
4,625,920	-		GFF4628	0.57	-1.4
4,625,928	-		GFF4628	0.58	+0.1
4,625,929	+		GFF4628	0.58	-1.1
4,625,933	+		GFF4628	0.58	+0.0
4,625,937	-		GFF4628	0.59	+0.4
4,625,939	+		GFF4628	0.59	-1.1
4,625,951	+		GFF4628	0.60	+1.0
4,625,951	+		GFF4628	0.60	-0.8
4,625,959	-		GFF4628	0.60	-0.9
4,625,959	-		GFF4628	0.60	-1.0
4,625,959	-		GFF4628	0.60	-1.2
4,625,959	-		GFF4628	0.60	-0.3
4,625,969	-		GFF4628	0.61	-1.7
4,625,977	-		GFF4628	0.61	+0.4
4,625,992	-		GFF4628	0.63	-0.9
4,625,992	-		GFF4628	0.63	-1.0
4,625,999	-		GFF4628	0.63	-1.8
4,626,000	+		GFF4628	0.63	+0.7
4,626,031	+		GFF4628	0.65	-1.2
4,626,031	+		GFF4628	0.65	-0.5
4,626,031	+		GFF4628	0.65	-1.6
4,626,031	+		GFF4628	0.65	+0.6
4,626,031	+		GFF4628	0.65	-1.8
4,626,031	+		GFF4628	0.65	-0.2
4,626,031	+		GFF4628	0.65	-0.5
4,626,031	+		GFF4628	0.65	-1.4
4,626,031	+		GFF4628	0.65	-0.7
4,626,031	+		GFF4628	0.65	-2.8
4,626,031	+		GFF4628	0.65	-0.6
4,626,039	-		GFF4628	0.66	-0.6
4,626,039	-		GFF4628	0.66	-1.6
4,626,039	-		GFF4628	0.66	-0.4
4,626,039	-		GFF4628	0.66	-1.7
4,626,039	-		GFF4628	0.66	-0.4
4,626,039	-		GFF4628	0.66	+0.2
4,626,039	-		GFF4628	0.66	-0.3
4,626,039	-		GFF4628	0.66	+0.4
4,626,039	-		GFF4628	0.66	-1.2
4,626,039	-		GFF4628	0.66	-0.1
4,626,039	-		GFF4628	0.66	-0.9
4,626,039	-		GFF4628	0.66	-0.4
4,626,039	-		GFF4628	0.66	-2.5
4,626,039	-		GFF4628	0.66	+0.0
4,626,039	-		GFF4628	0.66	-1.5
4,626,040	-		GFF4628	0.66	-1.7
4,626,040	-		GFF4628	0.66	-2.3
4,626,040	-		GFF4628	0.66	-1.6
4,626,040	-		GFF4628	0.66	-0.6
4,626,050	+		GFF4628	0.67	-0.7
4,626,058	-		GFF4628	0.67	+0.6
4,626,059	+		GFF4628	0.67	-0.5
4,626,102	-		GFF4628	0.71	-1.3
4,626,107	-		GFF4628	0.71	+0.8
4,626,107	-		GFF4628	0.71	-0.6
4,626,108	+		GFF4628	0.71	-0.4
4,626,116	-		GFF4628	0.72	-0.5
4,626,134	+		GFF4628	0.73	-2.6
4,626,134	+		GFF4628	0.73	-0.7
4,626,134	+		GFF4628	0.73	-0.1
4,626,139	+		GFF4628	0.73	-0.0
4,626,139	+		GFF4628	0.73	-0.2
4,626,142	-		GFF4628	0.74	+1.6
4,626,142	-		GFF4628	0.74	+0.4
4,626,146	-		GFF4628	0.74	-0.1
4,626,147	-		GFF4628	0.74	+0.4
4,626,179	+		GFF4628	0.76	-0.5
4,626,181	-		GFF4628	0.76	-1.7
4,626,182	-		GFF4628	0.76	-0.3
4,626,182	-		GFF4628	0.76	-0.4
4,626,187	+		GFF4628	0.77	-1.7
4,626,194	+		GFF4628	0.77	+0.2
4,626,195	-		GFF4628	0.77	-0.6
4,626,200	-		GFF4628	0.78	+0.5
4,626,247	+		GFF4628	0.81	+0.6
4,626,249	+		GFF4628	0.81	+0.7
4,626,249	+		GFF4628	0.81	-2.1
4,626,249	+		GFF4628	0.81	-0.3
4,626,252	-		GFF4628	0.82	+1.0
4,626,255	-		GFF4628	0.82	-2.3
4,626,274	-		GFF4628	0.83	-0.9
4,626,280	-		GFF4628	0.84	-0.6
4,626,309	-		GFF4628	0.86	-0.7
4,626,323	+		GFF4628	0.87	-0.7
4,626,331	-		GFF4628	0.87	-1.8
4,626,336	+		GFF4628	0.88	-0.1
4,626,336	-		GFF4628	0.88	-0.6
4,626,343	+		GFF4628	0.88	-0.8
4,626,343	+		GFF4628	0.88	-0.7
4,626,351	-		GFF4628	0.89	+0.0
4,626,351	-		GFF4628	0.89	+0.2
4,626,351	-		GFF4628	0.89	+0.3
4,626,397	+				+0.1
4,626,397	+				-0.7
4,626,405	-				-0.2
4,626,405	-				+0.2
4,626,424	-				-1.1
4,626,496	-				-0.9
4,626,498	+				+1.0
4,626,498	+				-0.9
4,626,524	+				-1.0
4,626,529	+				+0.1
4,626,532	-				-0.5
4,626,540	-		GFF4629	0.12	+0.2
4,626,540	-		GFF4629	0.12	-0.7
4,626,563	+		GFF4629	0.20	+1.0
4,626,563	+		GFF4629	0.20	-1.6
4,626,564	-		GFF4629	0.20	-0.3
4,626,565	+		GFF4629	0.20	-0.6
4,626,565	+		GFF4629	0.20	+0.9
4,626,565	+		GFF4629	0.20	+0.0
4,626,565	+		GFF4629	0.20	-2.1
4,626,565	+		GFF4629	0.20	-1.1
4,626,571	-		GFF4629	0.22	+0.3
4,626,571	-		GFF4629	0.22	-0.6
4,626,573	-		GFF4629	0.23	+0.5
4,626,573	-		GFF4629	0.23	+0.4
4,626,573	-		GFF4629	0.23	-1.4
4,626,573	-		GFF4629	0.23	-0.7
4,626,573	-		GFF4629	0.23	-2.7
4,626,579	+		GFF4629	0.25	-1.8
4,626,584	+		GFF4629	0.26	+0.3
4,626,613	-		GFF4629	0.36	-0.3
4,626,619	-		GFF4629	0.37	-2.4
4,626,653	+		GFF4629	0.48	-1.1
4,626,661	-		GFF4629	0.51	-0.4
4,626,661	-		GFF4629	0.51	-0.8
4,626,674	+		GFF4629	0.55	-0.8
4,626,674	+		GFF4629	0.55	-1.6
4,626,716	+		GFF4629	0.68	-0.4
4,626,724	-		GFF4629	0.71	-0.5
4,626,724	-		GFF4629	0.71	+0.2
4,626,728	+		GFF4629	0.72	-0.5
4,626,728	+		GFF4629	0.72	+0.4
4,626,728	+		GFF4629	0.72	-0.4
4,626,733	+		GFF4629	0.74	+0.9
4,626,733	+		GFF4629	0.74	-1.2
4,626,733	+		GFF4629	0.74	-2.4
4,626,736	-		GFF4629	0.75	-0.2
4,626,736	-		GFF4629	0.75	+0.0
4,626,736	-		GFF4629	0.75	-0.3
4,626,738	+		GFF4629	0.75	-1.6
4,626,741	-		GFF4629	0.76	+0.2
4,626,741	-		GFF4629	0.76	-1.0
4,626,751	-		GFF4629	0.79	-0.7
4,626,751	-		GFF4629	0.79	-2.4
4,626,790	+				+1.3
4,626,790	+				-0.8
4,626,795	+				+0.8
4,626,798	-				-0.9
4,626,798	-				-1.7
4,626,798	-				-0.3
4,626,798	-				-1.7
4,626,798	-				+0.7
4,626,798	-				+0.3
4,626,798	-				-1.8
4,626,800	+				+0.8
4,626,885	+				-0.8
4,626,903	+				-0.1
4,626,909	+				-1.1
4,626,911	-				-0.5
4,626,922	-				-0.4
4,626,946	-				-0.8
4,626,951	+				+1.1
4,626,951	+				+0.7
4,626,956	+				+1.0
4,626,962	+				+0.2
4,626,986	+		GFF4630	0.11	-0.5
4,626,992	+		GFF4630	0.12	-0.5
4,626,992	+		GFF4630	0.12	-0.3
4,627,007	-		GFF4630	0.13	-0.4
4,627,010	-		GFF4630	0.13	+1.6
4,627,015	-		GFF4630	0.13	-0.1
4,627,019	+		GFF4630	0.14	+0.5
4,627,031	+		GFF4630	0.14	+0.0
4,627,041	+		GFF4630	0.15	-2.2
4,627,044	-		GFF4630	0.15	+0.5
4,627,044	-		GFF4630	0.15	-2.2
4,627,046	+		GFF4630	0.15	+0.0
4,627,049	-		GFF4630	0.16	-0.5
4,627,049	-		GFF4630	0.16	+0.1
4,627,065	+		GFF4630	0.17	-0.8
4,627,068	+		GFF4630	0.17	+1.4
4,627,076	+		GFF4630	0.17	-0.4
4,627,077	+		GFF4630	0.17	-1.4
4,627,078	-		GFF4630	0.18	-2.1
4,627,085	-		GFF4630	0.18	-1.4
4,627,085	-		GFF4630	0.18	+0.1
4,627,085	-		GFF4630	0.18	+0.3
4,627,147	-		GFF4630	0.22	-0.7
4,627,177	+		GFF4630	0.24	-0.4
4,627,183	+		GFF4630	0.24	-1.0
4,627,190	-		GFF4630	0.25	-3.3
4,627,199	-		GFF4630	0.26	+0.6
4,627,227	+		GFF4630	0.27	-1.7
4,627,252	+		GFF4630	0.29	-3.7
4,627,252	+		GFF4630	0.29	-0.9
4,627,255	-		GFF4630	0.29	-0.9
4,627,282	+		GFF4630	0.31	-0.6
4,627,282	+		GFF4630	0.31	-0.1
4,627,295	-		GFF4630	0.32	+0.4
4,627,295	-		GFF4630	0.32	-1.8
4,627,300	+		GFF4630	0.32	-1.0
4,627,300	+		GFF4630	0.32	+1.0
4,627,300	-		GFF4630	0.32	+0.7
4,627,324	+		GFF4630	0.34	-1.3
4,627,340	+		GFF4630	0.35	-2.4
4,627,340	+		GFF4630	0.35	-2.6
4,627,342	-		GFF4630	0.35	-1.8
4,627,345	+		GFF4630	0.35	+0.1
4,627,345	+		GFF4630	0.35	+0.3
4,627,345	+		GFF4630	0.35	-1.0
4,627,345	+		GFF4630	0.35	-0.2
4,627,353	-		GFF4630	0.36	-0.1
4,627,353	-		GFF4630	0.36	-1.2
4,627,365	-		GFF4630	0.37	-0.2
4,627,365	-		GFF4630	0.37	-0.8
4,627,372	-		GFF4630	0.37	-0.4
4,627,382	+		GFF4630	0.38	-0.1
4,627,384	+		GFF4630	0.38	+0.0
4,627,384	+		GFF4630	0.38	-1.6
4,627,389	+		GFF4630	0.38	-1.4
4,627,395	+		GFF4630	0.38	-0.7
4,627,397	-		GFF4630	0.39	-1.4
4,627,397	-		GFF4630	0.39	+0.1
4,627,403	-		GFF4630	0.39	-0.9
4,627,403	-		GFF4630	0.39	-0.6
4,627,421	+		GFF4630	0.40	-0.9
4,627,430	+		GFF4630	0.41	+0.0
4,627,449	-		GFF4630	0.42	-0.4
4,627,449	-		GFF4630	0.42	-1.2
4,627,450	-		GFF4630	0.42	+1.2
4,627,469	-		GFF4630	0.43	+0.4
4,627,471	+		GFF4630	0.43	+0.2
4,627,474	-		GFF4630	0.44	-0.9
4,627,479	-		GFF4630	0.44	-0.4
4,627,484	+		GFF4630	0.44	-0.8
4,627,484	+		GFF4630	0.44	+0.2
4,627,503	+		GFF4630	0.46	+0.4
4,627,511	-		GFF4630	0.46	-1.4
4,627,511	-		GFF4630	0.46	-0.5
4,627,593	+		GFF4630	0.52	+1.1
4,627,601	-		GFF4630	0.52	-0.7
4,627,638	+		GFF4630	0.55	-0.5
4,627,654	-		GFF4630	0.56	+1.2
4,627,656	-		GFF4630	0.56	-1.2
4,627,662	-		GFF4630	0.56	-0.8
4,627,666	+		GFF4630	0.56	-0.9
4,627,666	+		GFF4630	0.56	-0.4
4,627,666	+		GFF4630	0.56	-0.1
4,627,671	+		GFF4630	0.57	-2.0
4,627,674	-		GFF4630	0.57	+0.9
4,627,674	-		GFF4630	0.57	-2.9
4,627,674	-		GFF4630	0.57	-0.3
4,627,674	-		GFF4630	0.57	+0.6
4,627,689	+		GFF4630	0.58	+1.3
4,627,706	+		GFF4630	0.59	-0.1
4,627,707	-		GFF4630	0.59	-1.9
4,627,712	-		GFF4630	0.59	+0.8
4,627,712	-		GFF4630	0.59	+0.0
4,627,724	+		GFF4630	0.60	-1.4
4,627,725	-		GFF4630	0.60	+0.3
4,627,735	+		GFF4630	0.61	-1.6
4,627,735	+		GFF4630	0.61	-0.2
4,627,735	+		GFF4630	0.61	-1.4
4,627,751	-		GFF4630	0.62	-0.4
4,627,773	-		GFF4630	0.63	-1.9
4,627,773	-		GFF4630	0.63	+0.3
4,627,773	-		GFF4630	0.63	-2.0
4,627,779	+		GFF4630	0.64	-0.8
4,627,787	-		GFF4630	0.64	-0.1
4,627,787	-		GFF4630	0.64	-0.4
4,627,787	-		GFF4630	0.64	-2.3
4,627,787	-		GFF4630	0.64	+1.2
4,627,794	+		GFF4630	0.65	+0.5
4,627,794	+		GFF4630	0.65	+0.3
4,627,802	-		GFF4630	0.65	-0.4
4,627,812	+		GFF4630	0.66	+0.0
4,627,812	+		GFF4630	0.66	-1.7
4,627,812	+		GFF4630	0.66	-0.6
4,627,812	+		GFF4630	0.66	-2.0
4,627,812	+		GFF4630	0.66	-2.0
4,627,820	-		GFF4630	0.67	+0.2
4,627,820	-		GFF4630	0.67	-1.1
4,627,820	-		GFF4630	0.67	-0.2
4,627,851	+		GFF4630	0.69	+0.3
4,627,904	+		GFF4630	0.72	-0.2
4,627,912	-		GFF4630	0.73	-1.8
4,627,918	-		GFF4630	0.73	-0.6
4,627,932	+		GFF4630	0.74	+0.4
4,627,940	-		GFF4630	0.74	-2.4
4,627,981	+		GFF4630	0.77	-1.0
4,628,021	-		GFF4630	0.80	+0.0
4,628,024	+		GFF4630	0.80	+0.1
4,628,029	+		GFF4630	0.80	+0.6
4,628,029	+		GFF4630	0.80	-0.9
4,628,029	+		GFF4630	0.80	-0.7
4,628,029	+		GFF4630	0.80	-0.8
4,628,029	+		GFF4630	0.80	-0.7
4,628,029	+		GFF4630	0.80	-1.0
4,628,029	+		GFF4630	0.80	+0.5
4,628,029	+		GFF4630	0.80	+0.6
4,628,032	-		GFF4630	0.81	-3.1
4,628,037	-		GFF4630	0.81	-1.1
4,628,037	-		GFF4630	0.81	-0.5
4,628,037	-		GFF4630	0.81	-0.6
4,628,037	-		GFF4630	0.81	-1.6
4,628,037	-		GFF4630	0.81	+0.9
4,628,037	-		GFF4630	0.81	-0.3
4,628,037	-		GFF4630	0.81	+0.6
4,628,037	-		GFF4630	0.81	+0.0
4,628,037	-		GFF4630	0.81	-1.7
4,628,037	-		GFF4630	0.81	-0.7
4,628,037	-		GFF4630	0.81	+0.2
4,628,037	-		GFF4630	0.81	+0.9
4,628,040	+		GFF4630	0.81	-0.8
4,628,049	+		GFF4630	0.82	+1.2
4,628,049	+		GFF4630	0.82	+1.3
4,628,049	+		GFF4630	0.82	-1.4
4,628,049	+		GFF4630	0.82	-1.8
4,628,049	+		GFF4630	0.82	-1.1
4,628,049	+		GFF4630	0.82	+1.0
4,628,057	-		GFF4630	0.82	-0.4
4,628,067	+		GFF4630	0.83	-2.4
4,628,068	-		GFF4630	0.83	+1.2
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