Strain Fitness in Sphingobium sp. HT1-2 around GFF4576

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,566,731	+		GFF4575	0.44	+0.8
4,566,735	-		GFF4575	0.44	-0.1
4,566,736	+		GFF4575	0.44	-1.2
4,566,736	+		GFF4575	0.44	-1.6
4,566,736	+		GFF4575	0.44	+0.2
4,566,736	+		GFF4575	0.44	+1.1
4,566,744	-		GFF4575	0.45	-3.5
4,566,752	+		GFF4575	0.45	+0.7
4,566,752	+		GFF4575	0.45	-0.3
4,566,752	+		GFF4575	0.45	-0.5
4,566,759	+		GFF4575	0.46	-1.1
4,566,760	-		GFF4575	0.46	-0.3
4,566,760	-		GFF4575	0.46	-2.9
4,566,760	-		GFF4575	0.46	+1.5
4,566,760	-		GFF4575	0.46	-1.5
4,566,763	+		GFF4575	0.46	-0.4
4,566,767	+		GFF4575	0.47	-2.5
4,566,767	-		GFF4575	0.47	-1.9
4,566,767	-		GFF4575	0.47	-0.6
4,566,781	-		GFF4575	0.48	-1.7
4,566,788	+		GFF4575	0.48	+0.1
4,566,793	+		GFF4575	0.49	-1.6
4,566,793	+		GFF4575	0.49	-0.5
4,566,801	+		GFF4575	0.49	+0.3
4,566,801	+		GFF4575	0.49	-1.8
4,566,803	+		GFF4575	0.49	-0.1
4,566,809	-		GFF4575	0.50	-2.2
4,566,837	+		GFF4575	0.52	-0.6
4,566,854	+		GFF4575	0.54	+0.2
4,566,919	+		GFF4575	0.59	-0.6
4,566,927	-		GFF4575	0.59	-0.0
4,566,959	+		GFF4575	0.62	+0.4
4,566,962	+		GFF4575	0.62	-1.6
4,566,962	+		GFF4575	0.62	+1.1
4,566,965	+		GFF4575	0.62	+0.0
4,566,967	-		GFF4575	0.63	-0.2
4,566,970	-		GFF4575	0.63	-0.5
4,567,000	+		GFF4575	0.65	+0.5
4,567,000	+		GFF4575	0.65	-0.3
4,567,030	+		GFF4575	0.68	-0.6
4,567,038	-		GFF4575	0.68	-0.1
4,567,047	+		GFF4575	0.69	-0.6
4,567,048	-		GFF4575	0.69	-0.9
4,567,058	+		GFF4575	0.70	-1.5
4,567,077	-		GFF4575	0.71	-0.4
4,567,079	+		GFF4575	0.72	-0.2
4,567,088	+		GFF4575	0.72	-1.8
4,567,091	+		GFF4575	0.73	+0.8
4,567,096	-		GFF4575	0.73	-2.2
4,567,110	+		GFF4575	0.74	-1.7
4,567,110	+		GFF4575	0.74	-1.8
4,567,110	+		GFF4575	0.74	+0.6
4,567,110	-		GFF4575	0.74	+0.0
4,567,147	+		GFF4575	0.77	-2.0
4,567,176	+		GFF4575	0.79	-1.7
4,567,181	+		GFF4575	0.80	+0.4
4,567,181	+		GFF4575	0.80	-0.7
4,567,181	+		GFF4575	0.80	+1.1
4,567,181	+		GFF4575	0.80	-1.4
4,567,181	+		GFF4575	0.80	-0.8
4,567,181	+		GFF4575	0.80	-0.3
4,567,181	+		GFF4575	0.80	-0.1
4,567,181	+		GFF4575	0.80	+0.4
4,567,184	-		GFF4575	0.80	-2.7
4,567,186	+		GFF4575	0.80	-1.6
4,567,189	-		GFF4575	0.80	+0.1
4,567,189	-		GFF4575	0.80	-0.4
4,567,189	-		GFF4575	0.80	+0.2
4,567,189	-		GFF4575	0.80	-0.1
4,567,189	-		GFF4575	0.80	+0.9
4,567,189	-		GFF4575	0.80	-0.5
4,567,191	+		GFF4575	0.81	-0.9
4,567,205	-		GFF4575	0.82	-1.0
4,567,207	+		GFF4575	0.82	-1.6
4,567,207	+		GFF4575	0.82	-0.4
4,567,215	-		GFF4575	0.82	-0.5
4,567,304	-		GFF4575	0.90	+0.5
4,567,306	-		GFF4575	0.90	-2.4
4,567,306	-		GFF4575	0.90	+0.7
4,567,306	-		GFF4575	0.90	-0.5
4,567,306	-		GFF4575	0.90	+0.8
4,567,339	+				-0.1
4,567,345	+				-1.0
4,567,350	+				-0.9
4,567,358	-				-0.1
4,567,382	+				+0.1
4,567,382	+				-0.4
4,567,389	-				+0.4
4,567,411	+				-1.0
4,567,414	+				-3.3
4,567,421	+				-2.4
4,567,421	+				+1.2
4,567,422	+				+1.0
4,567,422	+				-0.3
4,567,430	-				-0.6
4,567,434	-				-0.9
4,567,437	-				+0.5
4,567,458	+				-0.5
4,567,497	+				-0.1
4,567,503	-				-2.5
4,567,519	+				+0.1
4,567,527	-				-2.0
4,567,527	-				-0.7
4,567,527	-				-0.9
4,567,558	+				-1.1
4,567,591	+				-0.5
4,567,591	+				+0.2
4,567,599	-				-0.0
4,567,599	-				-0.7
4,567,616	+				-0.5
4,567,633	-				+0.6
4,567,666	+				+0.8
4,567,667	+				+0.1
4,567,695	-				-0.5
4,567,703	+				-2.2
4,567,703	+				+0.5
4,567,703	+				+0.3
4,567,703	+				+0.7
4,567,711	-				+0.7
4,567,711	-				-2.2
4,567,711	-				-1.1
4,567,711	-				+1.5
4,567,791	-				+0.1
4,567,791	-				-0.4
4,567,825	-				-0.5
4,567,857	+		GFF4576	0.13	+0.1
4,567,865	-		GFF4576	0.14	-2.5
4,567,865	-		GFF4576	0.14	-2.2
4,567,892	+		GFF4576	0.16	-0.7
4,567,892	+		GFF4576	0.16	-0.0
4,567,892	+		GFF4576	0.16	-0.6
4,567,900	-		GFF4576	0.17	+0.6
4,567,900	-		GFF4576	0.17	+0.7
4,567,900	-		GFF4576	0.17	-0.3
4,567,907	+		GFF4576	0.18	-0.9
4,567,923	+		GFF4576	0.19	+1.9
4,567,923	+		GFF4576	0.19	+1.7
4,567,931	-		GFF4576	0.20	+0.4
4,567,944	-		GFF4576	0.21	-0.2
4,567,946	+		GFF4576	0.22	-0.9
4,567,946	+		GFF4576	0.22	+0.3
4,567,949	-		GFF4576	0.22	-1.2
4,567,952	+		GFF4576	0.22	+1.1
4,567,953	+		GFF4576	0.22	+0.6
4,567,954	-		GFF4576	0.22	-0.9
4,567,958	+		GFF4576	0.23	+1.5
4,567,961	-		GFF4576	0.23	-0.2
4,567,963	+		GFF4576	0.23	-0.2
4,567,971	-		GFF4576	0.24	+0.4
4,567,991	-		GFF4576	0.26	-1.2
4,568,020	+		GFF4576	0.29	+0.3
4,568,035	+		GFF4576	0.31	-0.8
4,568,054	+		GFF4576	0.32	+0.8
4,568,054	+		GFF4576	0.32	-0.6
4,568,062	-		GFF4576	0.33	-0.6
4,568,062	-		GFF4576	0.33	+0.6
4,568,068	+		GFF4576	0.34	+0.4
4,568,068	+		GFF4576	0.34	-0.6
4,568,068	+		GFF4576	0.34	-0.4
4,568,075	+		GFF4576	0.35	+0.7
4,568,076	-		GFF4576	0.35	-0.3
4,568,086	+		GFF4576	0.36	-1.4
4,568,092	-		GFF4576	0.36	+0.8
4,568,092	-		GFF4576	0.36	-1.4
4,568,098	+		GFF4576	0.37	-2.3
4,568,098	+		GFF4576	0.37	-1.0
4,568,098	+		GFF4576	0.37	-2.2
4,568,105	+		GFF4576	0.38	+0.5
4,568,110	+		GFF4576	0.38	+0.1
4,568,110	+		GFF4576	0.38	-0.8
4,568,110	+		GFF4576	0.38	-0.9
4,568,115	+		GFF4576	0.39	+0.2
4,568,123	-		GFF4576	0.39	-0.2
4,568,134	+		GFF4576	0.40	-0.5
4,568,153	-		GFF4576	0.42	-0.1
4,568,161	-		GFF4576	0.43	-0.5
4,568,167	+		GFF4576	0.44	-1.5
4,568,185	+		GFF4576	0.45	-0.2
4,568,193	-		GFF4576	0.46	-1.3
4,568,193	-		GFF4576	0.46	+0.7
4,568,193	-		GFF4576	0.46	+0.1
4,568,193	-		GFF4576	0.46	+1.8
4,568,207	-		GFF4576	0.48	+0.2
4,568,208	+		GFF4576	0.48	-1.0
4,568,220	-		GFF4576	0.49	-0.1
4,568,222	-		GFF4576	0.49	-0.5
4,568,240	+		GFF4576	0.51	-1.2
4,568,246	+		GFF4576	0.52	+1.0
4,568,295	+		GFF4576	0.56	-1.6
4,568,295	+		GFF4576	0.56	+0.0
4,568,295	+		GFF4576	0.56	-1.6
4,568,295	+		GFF4576	0.56	-0.1
4,568,303	-		GFF4576	0.57	-1.2
4,568,303	-		GFF4576	0.57	-0.7
4,568,303	-		GFF4576	0.57	-0.8
4,568,303	-		GFF4576	0.57	+0.0
4,568,303	-		GFF4576	0.57	-0.8
4,568,303	-		GFF4576	0.57	+0.7
4,568,303	-		GFF4576	0.57	-0.8
4,568,303	-		GFF4576	0.57	-0.1
4,568,304	+		GFF4576	0.57	+1.1
4,568,312	+		GFF4576	0.58	-0.2
4,568,313	+		GFF4576	0.58	-0.7
4,568,313	+		GFF4576	0.58	-0.3
4,568,313	+		GFF4576	0.58	-0.6
4,568,313	+		GFF4576	0.58	+1.6
4,568,313	+		GFF4576	0.58	+1.5
4,568,313	+		GFF4576	0.58	-1.5
4,568,314	+		GFF4576	0.58	-2.5
4,568,321	-		GFF4576	0.59	-1.0
4,568,341	+		GFF4576	0.61	-0.7
4,568,341	+		GFF4576	0.61	+0.3
4,568,361	-		GFF4576	0.63	-0.5
4,568,368	+		GFF4576	0.64	+0.6
4,568,369	+		GFF4576	0.64	-1.2
4,568,371	-		GFF4576	0.64	-1.4
4,568,372	-		GFF4576	0.64	-1.0
4,568,379	+		GFF4576	0.65	-0.8
4,568,384	+		GFF4576	0.65	-1.5
4,568,398	+		GFF4576	0.67	-0.5
4,568,405	-		GFF4576	0.67	-0.7
4,568,415	-		GFF4576	0.68	+0.6
4,568,426	+		GFF4576	0.69	-0.8
4,568,504	+		GFF4576	0.77	+0.7
4,568,512	-		GFF4576	0.78	+0.2
4,568,526	+		GFF4576	0.79	-1.4
4,568,538	+		GFF4576	0.81	-0.7
4,568,546	-		GFF4576	0.81	+0.2
4,568,562	-		GFF4576	0.83	-1.7
4,568,575	-		GFF4576	0.84	+0.6
4,568,586	+		GFF4576	0.85	-1.3
4,568,599	-		GFF4576	0.87	-0.2
4,568,619	-		GFF4576	0.89	-1.6
4,568,620	+		GFF4576	0.89	-0.3
4,568,630	+		GFF4576	0.90	+0.5
4,568,637	+				+0.4
4,568,675	-				-1.1
4,568,680	+				-0.5
4,568,687	-				-0.8
4,568,697	+				+0.0
4,568,710	-				-0.6
4,568,715	+				+0.4
4,568,717	+				+1.3
4,568,717	+				+0.0
4,568,723	-				-0.2
4,568,759	-				-0.4
4,568,760	+				+0.3
4,568,760	+				+0.8
4,568,768	-				-0.6
4,568,778	-				-1.9
4,568,787	+				-1.7
4,568,790	-				-0.8
4,568,797	+				-0.1
4,568,816	+				-0.5
4,568,817	+				-2.2
4,568,838	-				+0.5
4,568,838	-				-2.1
4,568,848	-		GFF4577	0.10	-0.9
4,568,862	+		GFF4577	0.12	+0.7
4,568,894	+		GFF4577	0.14	-2.4
4,568,894	+		GFF4577	0.14	+0.1
4,568,894	+		GFF4577	0.14	-0.5
4,568,894	+		GFF4577	0.14	+0.7
4,568,894	+		GFF4577	0.14	+1.1
4,568,894	+		GFF4577	0.14	-0.6
4,568,894	+		GFF4577	0.14	-0.2
4,568,894	+		GFF4577	0.14	-0.5
4,568,894	+		GFF4577	0.14	-0.2
4,568,894	+		GFF4577	0.14	-0.5
4,568,902	-		GFF4577	0.15	-1.3
4,568,902	-		GFF4577	0.15	+0.4
4,568,902	-		GFF4577	0.15	-2.3
4,568,902	-		GFF4577	0.15	-0.6
4,568,902	-		GFF4577	0.15	-0.9
4,568,912	+		GFF4577	0.16	+0.4
4,568,920	-		GFF4577	0.16	-1.5
4,568,930	+		GFF4577	0.17	+0.0
4,568,930	+		GFF4577	0.17	+0.0
4,568,940	+		GFF4577	0.18	+0.1
4,568,940	+		GFF4577	0.18	-0.7
4,568,947	+		GFF4577	0.19	-0.7
4,568,948	-		GFF4577	0.19	+1.7
4,568,948	-		GFF4577	0.19	+0.4
4,568,962	-		GFF4577	0.20	+0.4
4,568,967	+		GFF4577	0.20	-1.7
4,568,983	+		GFF4577	0.22	+0.3
4,568,988	+		GFF4577	0.22	-2.1
4,568,988	+		GFF4577	0.22	-0.5
4,568,988	+		GFF4577	0.22	-0.4
4,568,988	+		GFF4577	0.22	+0.8
4,568,988	+		GFF4577	0.22	+0.6
4,568,991	-		GFF4577	0.23	+0.8
4,568,996	-		GFF4577	0.23	-0.0
4,568,996	-		GFF4577	0.23	+0.9
4,568,996	-		GFF4577	0.23	-1.5
4,569,008	+		GFF4577	0.24	-0.1
4,569,018	+		GFF4577	0.25	-0.1
4,569,019	-		GFF4577	0.25	+0.3
4,569,024	+		GFF4577	0.25	+0.1
4,569,027	+		GFF4577	0.26	-1.5
4,569,035	-		GFF4577	0.26	-0.3
4,569,035	-		GFF4577	0.26	-0.5
4,569,058	+		GFF4577	0.28	+0.0
4,569,058	+		GFF4577	0.28	+0.2
4,569,058	+		GFF4577	0.28	+0.9
4,569,058	+		GFF4577	0.28	-0.7
4,569,059	+		GFF4577	0.28	+1.5
4,569,061	+		GFF4577	0.28	-0.1
4,569,065	+		GFF4577	0.29	-0.3
4,569,065	+		GFF4577	0.29	+0.4
4,569,066	-		GFF4577	0.29	+0.3
4,569,066	-		GFF4577	0.29	-0.1
4,569,068	-		GFF4577	0.29	+0.6
4,569,074	+		GFF4577	0.30	-0.5
4,569,082	-		GFF4577	0.30	-0.1
4,569,092	+		GFF4577	0.31	-1.1
4,569,098	-		GFF4577	0.32	-0.7
4,569,100	+		GFF4577	0.32	-0.5
4,569,100	+		GFF4577	0.32	-2.2
4,569,100	+		GFF4577	0.32	-1.1
4,569,100	+		GFF4577	0.32	+0.9
4,569,100	+		GFF4577	0.32	-1.5
4,569,100	+		GFF4577	0.32	+0.3
4,569,100	+		GFF4577	0.32	-0.1
4,569,100	+		GFF4577	0.32	+0.7
4,569,100	+		GFF4577	0.32	-0.2
4,569,100	+		GFF4577	0.32	+0.1
4,569,100	+		GFF4577	0.32	-1.7
4,569,100	+		GFF4577	0.32	+0.2
4,569,100	+		GFF4577	0.32	+1.0
4,569,108	-		GFF4577	0.32	+0.5
4,569,108	-		GFF4577	0.32	-1.7
4,569,108	-		GFF4577	0.32	+0.7
4,569,108	-		GFF4577	0.32	-2.5
4,569,108	-		GFF4577	0.32	-0.1
4,569,108	-		GFF4577	0.32	+0.3
4,569,108	-		GFF4577	0.32	+0.9
4,569,108	-		GFF4577	0.32	-0.4
4,569,108	-		GFF4577	0.32	+0.1
4,569,108	-		GFF4577	0.32	-1.3
4,569,108	-		GFF4577	0.32	-1.4
4,569,108	-		GFF4577	0.32	+0.3
4,569,108	-		GFF4577	0.32	+0.7
4,569,109	-		GFF4577	0.32	-0.6
4,569,111	+		GFF4577	0.33	-2.2
4,569,111	+		GFF4577	0.33	+0.0
4,569,111	+		GFF4577	0.33	-0.8
4,569,111	+		GFF4577	0.33	+0.7
4,569,111	+		GFF4577	0.33	+1.2
4,569,129	-		GFF4577	0.34	-0.5
4,569,163	-		GFF4577	0.37	+0.6
4,569,188	-		GFF4577	0.39	-1.7
4,569,212	+		GFF4577	0.41	-0.3
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