Strain Fitness in Sphingobium sp. HT1-2 around GFF4573

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,564,246	-				+0.8
4,564,247	-				+0.2
4,564,247	-				+0.3
4,564,249	+				-1.4
4,564,257	-				-0.4
4,564,257	-				+0.1
4,564,257	-				+0.1
4,564,257	-				+0.8
4,564,258	-				-0.8
4,564,295	-				+1.6
4,564,326	+				-1.0
4,564,334	-				+0.9
4,564,334	-				+0.4
4,564,334	-				-1.2
4,564,356	+		GFF4572	0.11	-1.3
4,564,361	+		GFF4572	0.12	-0.9
4,564,364	-		GFF4572	0.13	-2.2
4,564,364	-		GFF4572	0.13	+1.1
4,564,366	+		GFF4572	0.13	-0.3
4,564,374	-		GFF4572	0.14	-1.2
4,564,374	-		GFF4572	0.14	-0.6
4,564,384	-		GFF4572	0.16	-0.6
4,564,439	-		GFF4572	0.24	-1.0
4,564,441	+		GFF4572	0.24	-1.1
4,564,441	+		GFF4572	0.24	-2.2
4,564,441	+		GFF4572	0.24	+0.4
4,564,441	+		GFF4572	0.24	-2.4
4,564,441	+		GFF4572	0.24	+0.2
4,564,441	+		GFF4572	0.24	-2.2
4,564,441	+		GFF4572	0.24	-0.8
4,564,441	+		GFF4572	0.24	+0.1
4,564,441	+		GFF4572	0.24	+0.3
4,564,441	+		GFF4572	0.24	+1.3
4,564,441	+		GFF4572	0.24	-0.4
4,564,441	+		GFF4572	0.24	+1.1
4,564,441	+		GFF4572	0.24	-0.6
4,564,441	+		GFF4572	0.24	-0.4
4,564,441	+		GFF4572	0.24	-0.6
4,564,441	+		GFF4572	0.24	+0.7
4,564,441	+		GFF4572	0.24	-1.8
4,564,446	+		GFF4572	0.25	-0.1
4,564,449	-		GFF4572	0.26	-0.5
4,564,449	-		GFF4572	0.26	-2.1
4,564,449	-		GFF4572	0.26	-0.8
4,564,449	-		GFF4572	0.26	+0.0
4,564,449	-		GFF4572	0.26	-2.8
4,564,449	-		GFF4572	0.26	+0.5
4,564,449	-		GFF4572	0.26	-1.1
4,564,449	-		GFF4572	0.26	-1.4
4,564,449	-		GFF4572	0.26	+0.4
4,564,449	-		GFF4572	0.26	+0.8
4,564,449	-		GFF4572	0.26	-0.7
4,564,449	-		GFF4572	0.26	+0.8
4,564,449	-		GFF4572	0.26	-0.2
4,564,449	-		GFF4572	0.26	+0.7
4,564,449	-		GFF4572	0.26	-1.3
4,564,449	-		GFF4572	0.26	-2.0
4,564,449	-		GFF4572	0.26	-1.4
4,564,449	-		GFF4572	0.26	-2.1
4,564,449	-		GFF4572	0.26	-2.4
4,564,452	+		GFF4572	0.26	-0.8
4,564,452	+		GFF4572	0.26	-0.2
4,564,454	-		GFF4572	0.26	-1.8
4,564,457	+		GFF4572	0.27	-2.4
4,564,457	+		GFF4572	0.27	+0.6
4,564,459	+		GFF4572	0.27	-1.5
4,564,459	-		GFF4572	0.27	+1.4
4,564,460	-		GFF4572	0.27	-1.1
4,564,460	-		GFF4572	0.27	+0.1
4,564,460	-		GFF4572	0.27	-0.4
4,564,465	-		GFF4572	0.28	+0.0
4,564,467	+		GFF4572	0.28	-1.3
4,564,467	-		GFF4572	0.28	-0.1
4,564,489	+		GFF4572	0.32	+0.4
4,564,489	+		GFF4572	0.32	-1.6
4,564,489	+		GFF4572	0.32	-0.2
4,564,489	+		GFF4572	0.32	-0.4
4,564,489	+		GFF4572	0.32	-2.1
4,564,489	+		GFF4572	0.32	+0.4
4,564,489	+		GFF4572	0.32	+1.5
4,564,489	+		GFF4572	0.32	-0.2
4,564,489	+		GFF4572	0.32	-1.2
4,564,489	+		GFF4572	0.32	-0.2
4,564,489	+		GFF4572	0.32	-1.1
4,564,489	+		GFF4572	0.32	-0.6
4,564,489	+		GFF4572	0.32	-1.8
4,564,489	+		GFF4572	0.32	-1.8
4,564,489	+		GFF4572	0.32	-0.3
4,564,489	+		GFF4572	0.32	-0.5
4,564,489	+		GFF4572	0.32	-2.3
4,564,489	+		GFF4572	0.32	-0.1
4,564,489	+		GFF4572	0.32	-0.9
4,564,489	+		GFF4572	0.32	-1.1
4,564,489	+		GFF4572	0.32	-1.2
4,564,489	+		GFF4572	0.32	+0.1
4,564,489	+		GFF4572	0.32	+0.6
4,564,489	+		GFF4572	0.32	-0.6
4,564,489	+		GFF4572	0.32	+0.4
4,564,489	+		GFF4572	0.32	-1.0
4,564,497	-		GFF4572	0.33	-1.6
4,564,497	-		GFF4572	0.33	-0.0
4,564,497	-		GFF4572	0.33	-1.6
4,564,497	-		GFF4572	0.33	-0.7
4,564,497	-		GFF4572	0.33	+0.7
4,564,497	-		GFF4572	0.33	-1.9
4,564,497	-		GFF4572	0.33	-1.0
4,564,497	-		GFF4572	0.33	-0.4
4,564,497	-		GFF4572	0.33	-0.6
4,564,497	-		GFF4572	0.33	-2.1
4,564,497	-		GFF4572	0.33	-0.6
4,564,497	-		GFF4572	0.33	-0.5
4,564,497	-		GFF4572	0.33	-0.1
4,564,497	-		GFF4572	0.33	+0.3
4,564,497	-		GFF4572	0.33	-0.7
4,564,497	-		GFF4572	0.33	-0.7
4,564,497	-		GFF4572	0.33	+0.4
4,564,497	-		GFF4572	0.33	-1.6
4,564,497	-		GFF4572	0.33	+0.3
4,564,497	-		GFF4572	0.33	+1.1
4,564,497	-		GFF4572	0.33	+0.1
4,564,497	-		GFF4572	0.33	-1.4
4,564,497	-		GFF4572	0.33	-0.1
4,564,497	-		GFF4572	0.33	+0.7
4,564,497	-		GFF4572	0.33	+0.2
4,564,529	-		GFF4572	0.38	-1.2
4,564,536	+		GFF4572	0.39	+0.2
4,564,536	+		GFF4572	0.39	-1.8
4,564,536	+		GFF4572	0.39	-0.1
4,564,536	+		GFF4572	0.39	-0.3
4,564,544	-		GFF4572	0.40	-1.7
4,564,544	-		GFF4572	0.40	+0.0
4,564,544	-		GFF4572	0.40	-0.1
4,564,544	-		GFF4572	0.40	+0.3
4,564,544	-		GFF4572	0.40	-0.6
4,564,544	-		GFF4572	0.40	+0.7
4,564,544	-		GFF4572	0.40	-0.2
4,564,552	+		GFF4572	0.41	-0.7
4,564,552	+		GFF4572	0.41	+0.5
4,564,558	+		GFF4572	0.42	+0.3
4,564,559	-		GFF4572	0.43	-2.0
4,564,567	-		GFF4572	0.44	-0.4
4,564,580	+		GFF4572	0.46	+0.9
4,564,580	+		GFF4572	0.46	+0.6
4,564,580	+		GFF4572	0.46	-0.8
4,564,580	+		GFF4572	0.46	-0.7
4,564,580	+		GFF4572	0.46	+0.0
4,564,580	+		GFF4572	0.46	-0.7
4,564,580	+		GFF4572	0.46	-0.9
4,564,588	-		GFF4572	0.47	-0.9
4,564,588	-		GFF4572	0.47	+0.6
4,564,588	-		GFF4572	0.47	+0.2
4,564,588	-		GFF4572	0.47	-0.8
4,564,588	-		GFF4572	0.47	-1.3
4,564,588	-		GFF4572	0.47	-0.5
4,564,588	-		GFF4572	0.47	-0.6
4,564,588	-		GFF4572	0.47	-0.2
4,564,590	+		GFF4572	0.47	+0.3
4,564,590	+		GFF4572	0.47	-2.2
4,564,590	+		GFF4572	0.47	-0.5
4,564,590	+		GFF4572	0.47	-0.4
4,564,590	+		GFF4572	0.47	-0.7
4,564,590	+		GFF4572	0.47	-0.5
4,564,598	-		GFF4572	0.49	-1.0
4,564,598	-		GFF4572	0.49	-1.4
4,564,598	-		GFF4572	0.49	-0.9
4,564,598	-		GFF4572	0.49	-1.4
4,564,598	-		GFF4572	0.49	-0.6
4,564,598	-		GFF4572	0.49	-0.4
4,564,598	-		GFF4572	0.49	+0.2
4,564,598	-		GFF4572	0.49	-0.9
4,564,598	-		GFF4572	0.49	+0.3
4,564,606	+		GFF4572	0.50	-1.2
4,564,606	+		GFF4572	0.50	+1.0
4,564,606	+		GFF4572	0.50	-0.3
4,564,606	+		GFF4572	0.50	-2.3
4,564,606	+		GFF4572	0.50	+0.2
4,564,609	+		GFF4572	0.50	-1.7
4,564,614	-		GFF4572	0.51	+0.2
4,564,617	-		GFF4572	0.51	-1.3
4,564,619	-		GFF4572	0.52	-1.4
4,564,624	-		GFF4572	0.53	-1.5
4,564,668	+		GFF4572	0.59	+0.8
4,564,670	-		GFF4572	0.60	-0.2
4,564,672	+		GFF4572	0.60	+0.0
4,564,693	+		GFF4572	0.63	+0.8
4,564,698	+		GFF4572	0.64	+0.8
4,564,701	-		GFF4572	0.64	-0.7
4,564,704	-		GFF4572	0.65	-1.0
4,564,704	-		GFF4572	0.65	+0.3
4,564,706	-		GFF4572	0.65	-0.9
4,564,722	+		GFF4572	0.68	-0.2
4,564,722	+		GFF4572	0.68	-2.4
4,564,722	+		GFF4572	0.68	-0.6
4,564,722	+		GFF4572	0.68	-1.0
4,564,723	+		GFF4572	0.68	-0.5
4,564,723	+		GFF4572	0.68	-1.2
4,564,728	+		GFF4572	0.69	-0.4
4,564,730	-		GFF4572	0.69	-1.7
4,564,730	-		GFF4572	0.69	-0.6
4,564,730	-		GFF4572	0.69	-1.1
4,564,751	-		GFF4572	0.72	-0.4
4,564,801	+		GFF4572	0.80	-0.8
4,564,831	+		GFF4572	0.84	+0.6
4,564,832	+		GFF4572	0.84	-0.5
4,564,834	-		GFF4572	0.85	-1.0
4,564,837	+		GFF4572	0.85	-0.7
4,564,837	+		GFF4572	0.85	-2.4
4,564,838	+		GFF4572	0.85	-0.4
4,564,845	-		GFF4572	0.86	-1.6
4,564,845	-		GFF4572	0.86	-0.9
4,564,845	-		GFF4572	0.86	-1.8
4,564,868	+				-0.5
4,564,868	+				-1.3
4,564,876	-				+1.4
4,564,876	-				-0.8
4,564,883	+				-1.8
4,564,891	-				+0.0
4,564,891	-				-2.2
4,564,909	-				-1.9
4,564,946	+				+0.3
4,564,946	+				-2.1
4,564,954	-				-1.0
4,564,965	-				-2.4
4,564,971	+				-0.5
4,564,972	+				+1.0
4,564,972	+				+0.3
4,564,972	+				-0.9
4,564,972	+				-1.0
4,564,978	+				+0.5
4,564,980	-				+0.2
4,564,980	-				-3.2
4,564,980	-				-1.8
4,564,980	-				-0.6
4,564,980	-				-1.8
4,565,008	-				-0.1
4,565,026	-				-1.4
4,565,042	+				-0.2
4,565,109	+				-1.3
4,565,117	-				+0.6
4,565,122	-				+1.7
4,565,130	-		GFF4573	0.10	+0.0
4,565,132	-		GFF4573	0.11	+0.1
4,565,134	+		GFF4573	0.11	+0.3
4,565,138	+		GFF4573	0.12	+0.7
4,565,138	+		GFF4573	0.12	-0.4
4,565,138	+		GFF4573	0.12	-2.2
4,565,146	-		GFF4573	0.13	-0.5
4,565,146	-		GFF4573	0.13	+0.7
4,565,146	-		GFF4573	0.13	+0.1
4,565,206	+		GFF4573	0.22	+0.4
4,565,206	+		GFF4573	0.22	-0.5
4,565,206	+		GFF4573	0.22	-1.4
4,565,214	-		GFF4573	0.23	+1.0
4,565,216	+		GFF4573	0.24	-0.6
4,565,216	+		GFF4573	0.24	-0.3
4,565,216	+		GFF4573	0.24	+0.1
4,565,216	+		GFF4573	0.24	+0.4
4,565,224	-		GFF4573	0.25	-0.0
4,565,224	-		GFF4573	0.25	-0.7
4,565,239	+		GFF4573	0.27	-0.9
4,565,270	+		GFF4573	0.32	+1.2
4,565,278	-		GFF4573	0.33	-1.1
4,565,291	+		GFF4573	0.35	-0.3
4,565,291	+		GFF4573	0.35	-1.5
4,565,303	+		GFF4573	0.37	-0.9
4,565,311	-		GFF4573	0.38	+0.4
4,565,330	+		GFF4573	0.41	+0.7
4,565,331	+		GFF4573	0.41	+1.0
4,565,332	+		GFF4573	0.41	+0.5
4,565,337	+		GFF4573	0.42	+1.1
4,565,338	-		GFF4573	0.42	-0.4
4,565,340	+		GFF4573	0.43	+1.3
4,565,355	-		GFF4573	0.45	+0.3
4,565,375	+		GFF4573	0.48	+0.4
4,565,375	+		GFF4573	0.48	-0.6
4,565,376	+		GFF4573	0.48	-1.7
4,565,383	-		GFF4573	0.49	+1.4
4,565,383	-		GFF4573	0.49	-2.9
4,565,383	-		GFF4573	0.49	+0.2
4,565,399	+		GFF4573	0.52	-1.5
4,565,399	+		GFF4573	0.52	-0.2
4,565,407	-		GFF4573	0.53	+1.3
4,565,407	-		GFF4573	0.53	-1.6
4,565,440	-		GFF4573	0.58	-1.0
4,565,440	-		GFF4573	0.58	+0.8
4,565,445	-		GFF4573	0.59	-0.3
4,565,472	-		GFF4573	0.63	+1.4
4,565,480	+		GFF4573	0.64	+0.4
4,565,480	+		GFF4573	0.64	+0.0
4,565,488	-		GFF4573	0.65	+0.0
4,565,534	+		GFF4573	0.72	-0.7
4,565,542	-		GFF4573	0.73	-1.1
4,565,542	-		GFF4573	0.73	-1.6
4,565,597	-		GFF4573	0.82	-1.1
4,565,607	-		GFF4573	0.83	+0.9
4,565,625	+		GFF4573	0.86	-2.0
4,565,627	+		GFF4573	0.86	+0.8
4,565,635	+		GFF4573	0.88	-1.2
4,565,637	+		GFF4573	0.88	-0.7
4,565,637	+		GFF4573	0.88	-0.7
4,565,637	+		GFF4573	0.88	-1.9
4,565,638	-		GFF4573	0.88	+0.0
4,565,642	+		GFF4573	0.89	-0.5
4,565,642	+		GFF4573	0.89	-1.7
4,565,642	+		GFF4573	0.89	-0.6
4,565,642	+		GFF4573	0.89	+0.2
4,565,642	+		GFF4573	0.89	+0.0
4,565,642	+		GFF4573	0.89	-0.7
4,565,642	+		GFF4573	0.89	+0.0
4,565,642	+		GFF4573	0.89	-1.0
4,565,643	-		GFF4573	0.89	-0.7
4,565,645	-		GFF4573	0.89	+0.8
4,565,650	-				+0.0
4,565,650	-				+0.6
4,565,650	-				-0.5
4,565,650	-				-0.1
4,565,650	-				-0.4
4,565,669	-				-0.3
4,565,687	+				-1.1
4,565,688	+				-0.3
4,565,688	+				-1.0
4,565,688	+				+0.4
4,565,696	-				-0.2
4,565,696	-				-0.4
4,565,696	-				+0.2
4,565,696	-				-1.9
4,565,696	-				-0.7
4,565,703	+				-0.7
4,565,758	-				-1.1
4,565,758	-				-1.8
4,565,785	+				-2.4
4,565,793	+				+0.4
4,565,797	-				+0.4
4,565,813	+				+0.4
4,565,814	+				-0.4
4,565,821	-				-0.2
4,565,832	-				-0.5
4,565,855	-		GFF4574	0.16	-1.4
4,565,860	-		GFF4574	0.18	+0.5
4,565,860	-		GFF4574	0.18	-1.9
4,565,860	-		GFF4574	0.18	-0.5
4,565,860	-		GFF4574	0.18	+0.0
4,565,862	+		GFF4574	0.18	-0.9
4,565,862	+		GFF4574	0.18	+0.2
4,565,862	+		GFF4574	0.18	+0.1
4,565,862	+		GFF4574	0.18	-0.4
4,565,870	-		GFF4574	0.21	-1.9
4,565,870	-		GFF4574	0.21	+0.2
4,565,870	-		GFF4574	0.21	+0.0
4,565,870	-		GFF4574	0.21	+1.2
4,565,870	-		GFF4574	0.21	+0.4
4,565,870	-		GFF4574	0.21	-1.5
4,565,875	+		GFF4574	0.22	-0.6
4,565,875	+		GFF4574	0.22	-1.1
4,565,880	+		GFF4574	0.24	+0.9
4,565,880	+		GFF4574	0.24	+0.3
4,565,883	-		GFF4574	0.25	-1.7
4,565,888	-		GFF4574	0.26	-0.6
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4,566,086	+		GFF4574	0.87	-0.3
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4,566,122	+				+0.1
4,566,122	+				-1.0
4,566,122	+				+0.7
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4,566,135	-				-1.0
4,566,164	+				-1.4
4,566,164	+				+0.0
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4,566,172	-				+0.8
4,566,184	-				-0.7
4,566,188	+				-0.7
4,566,222	-				+0.5
4,566,224	+				-0.6
4,566,224	+				-0.5
4,566,224	+				-1.6
4,566,224	+				-0.4
4,566,227	-				-0.7
4,566,231	+				-0.2
4,566,231	+				+0.3
4,566,231	+				+0.9
4,566,232	-				-2.5
4,566,232	-				-1.1
4,566,232	-				+0.4
4,566,232	-				+0.1
4,566,232	-				-0.9
4,566,232	-				-0.1
4,566,232	-				-0.5
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4,566,239	-				+0.4
4,566,252	-				+0.9
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4,566,260	+				-1.6
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4,566,270	+				-1.7
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4,566,291	-				+0.8
4,566,291	-				-1.6
4,566,298	-				+0.3
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