Strain Fitness in Sphingobium sp. HT1-2 around GFF4514

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,508,164	+		GFF4513	0.75	+0.5
4,508,168	+		GFF4513	0.75	+0.3
4,508,168	+		GFF4513	0.75	-0.5
4,508,185	+		GFF4513	0.75	-0.7
4,508,193	-		GFF4513	0.76	-0.8
4,508,223	+		GFF4513	0.77	+0.4
4,508,223	+		GFF4513	0.77	-1.0
4,508,223	+		GFF4513	0.77	-0.7
4,508,223	+		GFF4513	0.77	-0.1
4,508,223	+		GFF4513	0.77	-0.4
4,508,223	+		GFF4513	0.77	+0.0
4,508,223	+		GFF4513	0.77	-0.1
4,508,223	+		GFF4513	0.77	-1.4
4,508,223	+		GFF4513	0.77	-1.0
4,508,223	+		GFF4513	0.77	-1.0
4,508,223	+		GFF4513	0.77	-0.1
4,508,223	+		GFF4513	0.77	-0.7
4,508,223	+		GFF4513	0.77	+0.9
4,508,223	+		GFF4513	0.77	+0.6
4,508,223	+		GFF4513	0.77	-0.4
4,508,223	+		GFF4513	0.77	-1.6
4,508,223	+		GFF4513	0.77	-1.6
4,508,228	+		GFF4513	0.77	-0.9
4,508,228	+		GFF4513	0.77	+0.4
4,508,231	-		GFF4513	0.77	+0.8
4,508,231	-		GFF4513	0.77	-0.3
4,508,231	-		GFF4513	0.77	-0.6
4,508,231	-		GFF4513	0.77	-0.5
4,508,231	-		GFF4513	0.77	-0.7
4,508,231	-		GFF4513	0.77	-0.8
4,508,231	-		GFF4513	0.77	+0.3
4,508,231	-		GFF4513	0.77	-1.1
4,508,233	+		GFF4513	0.77	-1.7
4,508,236	-		GFF4513	0.77	-1.0
4,508,236	-		GFF4513	0.77	-1.7
4,508,236	-		GFF4513	0.77	+0.3
4,508,238	-		GFF4513	0.77	-1.0
4,508,241	-		GFF4513	0.77	-0.6
4,508,241	-		GFF4513	0.77	-0.5
4,508,248	+		GFF4513	0.77	-0.8
4,508,248	+		GFF4513	0.77	+0.0
4,508,248	+		GFF4513	0.77	-0.4
4,508,256	-		GFF4513	0.78	-0.6
4,508,260	+		GFF4513	0.78	+1.0
4,508,268	-		GFF4513	0.78	+0.8
4,508,270	+		GFF4513	0.78	-0.8
4,508,270	+		GFF4513	0.78	-0.0
4,508,278	-		GFF4513	0.78	-1.8
4,508,278	-		GFF4513	0.78	-0.4
4,508,282	-		GFF4513	0.78	+0.1
4,508,285	+		GFF4513	0.78	-0.4
4,508,292	-		GFF4513	0.79	-0.3
4,508,323	+		GFF4513	0.80	-0.1
4,508,329	+		GFF4513	0.80	+1.3
4,508,330	+		GFF4513	0.80	-1.4
4,508,336	-		GFF4513	0.80	+0.4
4,508,338	-		GFF4513	0.80	-1.1
4,508,338	-		GFF4513	0.80	-1.0
4,508,343	+		GFF4513	0.80	-0.6
4,508,345	+		GFF4513	0.80	+2.1
4,508,354	+		GFF4513	0.80	+0.4
4,508,359	+		GFF4513	0.81	-0.4
4,508,365	+		GFF4513	0.81	-0.1
4,508,392	-		GFF4513	0.82	+0.9
4,508,392	-		GFF4513	0.82	+1.0
4,508,396	+		GFF4513	0.82	+0.6
4,508,401	+		GFF4513	0.82	+0.9
4,508,403	+		GFF4513	0.82	-1.3
4,508,409	-		GFF4513	0.82	-0.6
4,508,413	+		GFF4513	0.82	+0.9
4,508,416	-		GFF4513	0.82	-0.4
4,508,416	-		GFF4513	0.82	-0.2
4,508,421	-		GFF4513	0.82	-2.2
4,508,430	+		GFF4513	0.83	-0.6
4,508,430	+		GFF4513	0.83	-0.8
4,508,438	-		GFF4513	0.83	+0.7
4,508,438	-		GFF4513	0.83	+0.9
4,508,438	-		GFF4513	0.83	-0.6
4,508,447	+		GFF4513	0.83	+0.2
4,508,447	+		GFF4513	0.83	-1.4
4,508,447	+		GFF4513	0.83	-1.8
4,508,447	+		GFF4513	0.83	+0.1
4,508,450	-		GFF4513	0.83	-0.9
4,508,450	-		GFF4513	0.83	-1.5
4,508,455	-		GFF4513	0.83	-0.6
4,508,455	-		GFF4513	0.83	-0.0
4,508,455	-		GFF4513	0.83	-2.4
4,508,455	-		GFF4513	0.83	-0.3
4,508,456	+		GFF4513	0.83	-0.2
4,508,491	+		GFF4513	0.84	+0.1
4,508,497	-		GFF4513	0.85	+0.3
4,508,499	-		GFF4513	0.85	+1.5
4,508,509	-		GFF4513	0.85	-2.1
4,508,523	+		GFF4513	0.85	+0.0
4,508,529	+		GFF4513	0.86	+0.3
4,508,531	-		GFF4513	0.86	-0.6
4,508,531	-		GFF4513	0.86	+1.0
4,508,571	+		GFF4513	0.87	-0.0
4,508,571	+		GFF4513	0.87	+0.8
4,508,571	+		GFF4513	0.87	-0.3
4,508,571	+		GFF4513	0.87	+0.8
4,508,571	+		GFF4513	0.87	+0.3
4,508,571	+		GFF4513	0.87	-1.1
4,508,571	+		GFF4513	0.87	-0.2
4,508,571	+		GFF4513	0.87	+0.8
4,508,571	+		GFF4513	0.87	+0.6
4,508,571	+		GFF4513	0.87	+0.3
4,508,571	+		GFF4513	0.87	+0.5
4,508,571	+		GFF4513	0.87	+0.5
4,508,571	+		GFF4513	0.87	+0.7
4,508,571	+		GFF4513	0.87	+1.0
4,508,571	+		GFF4513	0.87	-0.7
4,508,571	+		GFF4513	0.87	-0.2
4,508,571	+		GFF4513	0.87	-0.4
4,508,571	+		GFF4513	0.87	+0.3
4,508,571	+		GFF4513	0.87	-1.3
4,508,571	+		GFF4513	0.87	-0.7
4,508,571	+		GFF4513	0.87	+0.7
4,508,579	-		GFF4513	0.87	+0.0
4,508,579	-		GFF4513	0.87	+0.6
4,508,579	-		GFF4513	0.87	-1.3
4,508,579	-		GFF4513	0.87	+1.4
4,508,579	-		GFF4513	0.87	-0.7
4,508,579	-		GFF4513	0.87	+0.7
4,508,579	-		GFF4513	0.87	+0.2
4,508,579	-		GFF4513	0.87	-2.5
4,508,579	-		GFF4513	0.87	-1.3
4,508,579	-		GFF4513	0.87	-0.2
4,508,579	-		GFF4513	0.87	-0.0
4,508,579	-		GFF4513	0.87	-0.1
4,508,579	-		GFF4513	0.87	+1.0
4,508,579	-		GFF4513	0.87	-0.3
4,508,579	-		GFF4513	0.87	+0.4
4,508,579	-		GFF4513	0.87	-0.3
4,508,582	+		GFF4513	0.87	-1.0
4,508,582	+		GFF4513	0.87	-0.3
4,508,589	-		GFF4513	0.87	-2.1
4,508,589	-		GFF4513	0.87	-0.0
4,508,590	-		GFF4513	0.87	+2.0
4,508,595	-		GFF4513	0.87	-0.1
4,508,617	+		GFF4513	0.88	+0.7
4,508,644	+		GFF4513	0.89	-0.9
4,508,652	-		GFF4513	0.89	+0.4
4,508,671	+		GFF4513	0.90	-0.7
4,508,671	+		GFF4513	0.90	-0.4
4,508,671	+		GFF4513	0.90	+1.3
4,508,671	+		GFF4513	0.90	+0.4
4,508,671	+		GFF4513	0.90	+0.0
4,508,671	+		GFF4513	0.90	+0.0
4,508,671	+		GFF4513	0.90	-0.6
4,508,671	+		GFF4513	0.90	+0.8
4,508,679	-		GFF4513	0.90	-0.1
4,508,692	-				-0.6
4,508,694	+				-2.0
4,508,694	+				-1.2
4,508,694	+				-2.1
4,508,702	-				-0.6
4,508,702	-				-1.0
4,508,702	-				-0.3
4,508,702	-				+0.8
4,508,702	-				+0.2
4,508,702	-				+0.3
4,508,702	-				+0.9
4,508,702	-				-1.2
4,508,702	-				+0.0
4,508,702	-				+0.0
4,508,702	-				-1.5
4,508,702	-				-1.5
4,508,702	-				+0.4
4,508,711	+				-2.7
4,508,721	+				+0.9
4,508,721	+				-0.0
4,508,728	-				-0.3
4,508,729	-				-1.7
4,508,729	-				-0.4
4,508,742	-				-2.3
4,508,756	+				-0.4
4,508,757	+				+0.5
4,508,757	+				-0.4
4,508,757	+				-3.4
4,508,757	+				-0.8
4,508,757	+				-1.8
4,508,765	-				-1.9
4,508,765	-				-0.2
4,508,765	-				-1.4
4,508,765	-				-0.3
4,508,765	-				+1.0
4,508,765	-				-1.0
4,508,765	-				-0.3
4,508,770	+				+1.1
4,508,771	-				-1.8
4,508,771	-				-0.4
4,508,796	+				-0.7
4,508,799	-				-0.1
4,508,812	-				-0.7
4,508,814	-				-1.6
4,508,819	+				-0.7
4,508,819	+				-1.5
4,508,829	+				-1.4
4,508,832	+				-0.6
4,508,838	+				+0.4
4,508,846	-				-1.4
4,508,852	+				-0.1
4,508,880	+				-1.0
4,508,880	+				+0.3
4,508,897	-				-0.1
4,508,915	-				+0.3
4,508,920	-				-0.6
4,508,925	-				+0.2
4,508,938	-				+0.1
4,508,942	-				-0.9
4,508,947	-				-0.6
4,508,950	+				-0.6
4,508,950	+				-1.1
4,508,950	+				+0.1
4,508,950	+				+0.6
4,508,952	-				+0.5
4,508,952	-				-0.6
4,508,961	+				-1.6
4,508,964	-				+1.1
4,508,964	-				-1.2
4,508,981	+				-1.1
4,508,981	+				+1.1
4,508,981	+				-0.0
4,508,981	+				+1.7
4,508,989	-				-0.7
4,508,989	-				-0.1
4,509,005	+				-0.4
4,509,013	-				-0.4
4,509,015	+				-1.5
4,509,059	-				+1.2
4,509,072	+				+0.9
4,509,077	+				+0.9
4,509,084	+				-1.7
4,509,084	+				+0.3
4,509,092	+				+0.8
4,509,097	+				+0.1
4,509,097	+				-0.5
4,509,097	+				+0.2
4,509,097	+				+0.1
4,509,097	+				-0.2
4,509,097	+				-0.1
4,509,097	+				+1.0
4,509,097	+				+0.6
4,509,097	+				-1.1
4,509,097	+				-1.9
4,509,097	+				-0.1
4,509,097	+				+0.1
4,509,097	+				+0.3
4,509,097	+				+0.2
4,509,097	+				+0.3
4,509,097	+				-1.2
4,509,097	+				-0.9
4,509,097	+				-0.8
4,509,097	+				-1.4
4,509,100	-				-0.8
4,509,105	-				-1.3
4,509,105	-				-1.1
4,509,105	-				-0.8
4,509,105	-				+0.1
4,509,105	-				+0.6
4,509,105	-				+1.0
4,509,105	-				-1.8
4,509,105	-				+0.0
4,509,105	-				+0.8
4,509,105	-				+0.0
4,509,105	-				-0.7
4,509,111	-				-1.2
4,509,128	+				-0.4
4,509,128	+				+0.3
4,509,131	+				-0.1
4,509,149	+				+0.3
4,509,149	+				+0.0
4,509,157	-				+0.7
4,509,159	+				+0.6
4,509,189	+				-1.2
4,509,199	-				-0.6
4,509,199	-				-0.5
4,509,214	-				-2.3
4,509,225	+				-2.4
4,509,225	+				-1.1
4,509,225	+				-0.1
4,509,230	+				-0.2
4,509,230	+				-1.9
4,509,230	+				-1.6
4,509,233	-				-0.2
4,509,238	-				-1.0
4,509,269	-				-0.1
4,509,280	+				+0.1
4,509,280	+				+0.7
4,509,280	+				-0.3
4,509,324	+				+0.8
4,509,327	-				-0.6
4,509,332	-				+1.1
4,509,345	-				-1.8
4,509,356	-		GFF4514	0.10	-1.8
4,509,356	-		GFF4514	0.10	-0.3
4,509,376	+		GFF4514	0.11	+0.8
4,509,383	-		GFF4514	0.12	-0.3
4,509,385	+		GFF4514	0.12	+0.7
4,509,385	+		GFF4514	0.12	+1.5
4,509,385	+		GFF4514	0.12	-0.5
4,509,385	+		GFF4514	0.12	+0.4
4,509,385	+		GFF4514	0.12	-1.6
4,509,385	+		GFF4514	0.12	+0.4
4,509,385	+		GFF4514	0.12	-0.1
4,509,385	+		GFF4514	0.12	-0.1
4,509,385	+		GFF4514	0.12	-0.4
4,509,385	+		GFF4514	0.12	+0.2
4,509,385	+		GFF4514	0.12	+0.9
4,509,385	+		GFF4514	0.12	+0.4
4,509,385	+		GFF4514	0.12	-0.4
4,509,385	+		GFF4514	0.12	+0.2
4,509,385	+		GFF4514	0.12	-0.6
4,509,385	+		GFF4514	0.12	-0.8
4,509,385	+		GFF4514	0.12	-0.6
4,509,393	-		GFF4514	0.12	+0.5
4,509,393	-		GFF4514	0.12	+1.0
4,509,393	-		GFF4514	0.12	+0.8
4,509,393	-		GFF4514	0.12	+0.5
4,509,393	-		GFF4514	0.12	-1.7
4,509,393	-		GFF4514	0.12	-1.9
4,509,393	-		GFF4514	0.12	+1.1
4,509,393	-		GFF4514	0.12	-0.9
4,509,393	-		GFF4514	0.12	+0.2
4,509,393	-		GFF4514	0.12	-1.6
4,509,393	-		GFF4514	0.12	-3.1
4,509,393	-		GFF4514	0.12	-0.8
4,509,393	-		GFF4514	0.12	-0.5
4,509,400	+		GFF4514	0.12	-0.1
4,509,408	-		GFF4514	0.13	-3.2
4,509,426	-		GFF4514	0.14	-2.0
4,509,449	+		GFF4514	0.15	-1.2
4,509,449	+		GFF4514	0.15	-0.3
4,509,449	+		GFF4514	0.15	-2.0
4,509,449	+		GFF4514	0.15	+0.0
4,509,449	+		GFF4514	0.15	+0.4
4,509,449	+		GFF4514	0.15	-2.5
4,509,454	+		GFF4514	0.15	-2.3
4,509,454	+		GFF4514	0.15	+0.3
4,509,454	+		GFF4514	0.15	-0.2
4,509,455	+		GFF4514	0.15	+0.5
4,509,455	+		GFF4514	0.15	-0.3
4,509,456	+		GFF4514	0.15	-1.3
4,509,457	-		GFF4514	0.15	+0.2
4,509,457	-		GFF4514	0.15	-0.1
4,509,457	-		GFF4514	0.15	-1.8
4,509,457	-		GFF4514	0.15	+1.2
4,509,462	-		GFF4514	0.16	+0.0
4,509,464	-		GFF4514	0.16	-1.7
4,509,495	-		GFF4514	0.17	+0.1
4,509,500	-		GFF4514	0.18	+0.2
4,509,508	-		GFF4514	0.18	-1.1
4,509,515	-		GFF4514	0.18	-2.7
4,509,528	+		GFF4514	0.19	-0.6
4,509,545	-		GFF4514	0.20	-0.1
4,509,550	-		GFF4514	0.20	-1.4
4,509,550	-		GFF4514	0.20	+0.4
4,509,553	+		GFF4514	0.20	+0.9
4,509,569	+		GFF4514	0.21	-0.4
4,509,574	+		GFF4514	0.22	+0.2
4,509,577	-		GFF4514	0.22	-2.6
4,509,577	-		GFF4514	0.22	+0.3
4,509,577	-		GFF4514	0.22	+0.7
4,509,579	+		GFF4514	0.22	-0.9
4,509,582	-		GFF4514	0.22	+1.2
4,509,582	-		GFF4514	0.22	-0.6
4,509,593	+		GFF4514	0.23	-0.8
4,509,593	+		GFF4514	0.23	-2.3
4,509,593	+		GFF4514	0.23	-0.2
4,509,597	-		GFF4514	0.23	+0.5
4,509,601	-		GFF4514	0.23	-0.3
4,509,601	-		GFF4514	0.23	-0.1
4,509,601	-		GFF4514	0.23	-1.1
4,509,606	-		GFF4514	0.23	+0.4
4,509,616	+		GFF4514	0.24	-2.0
4,509,650	+		GFF4514	0.26	-0.8
4,509,650	+		GFF4514	0.26	-0.4
4,509,650	+		GFF4514	0.26	-1.4
4,509,653	-		GFF4514	0.26	+1.0
4,509,658	-		GFF4514	0.26	-0.1
4,509,662	+		GFF4514	0.26	+0.8
4,509,662	+		GFF4514	0.26	+0.4
4,509,667	+		GFF4514	0.26	-1.3
4,509,672	+		GFF4514	0.27	-0.2
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4,511,454	-				-0.4
4,511,475	-				+1.1
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4,511,570	-				+0.0
4,511,570	-				-2.0
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4,511,572	+				+0.4
4,511,572	+				+0.1
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4,511,572	+				-1.1
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4,511,572	+				+0.0
4,511,580	-				-1.2
4,511,580	-				-2.2
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4,511,626	+				+1.4
4,511,647	-				+0.3
4,511,647	-				-1.1
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4,511,669	+				+0.9
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