Strain Fitness in Sphingobium sp. HT1-2 around GFF4502

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,495,405	-		GFF4501	0.59	+0.0
4,495,405	-		GFF4501	0.59	-0.2
4,495,407	+		GFF4501	0.60	-0.6
4,495,415	-		GFF4501	0.60	-2.4
4,495,416	-		GFF4501	0.61	-2.2
4,495,417	-		GFF4501	0.61	+1.2
4,495,417	-		GFF4501	0.61	-1.5
4,495,417	-		GFF4501	0.61	+1.0
4,495,417	-		GFF4501	0.61	-0.2
4,495,419	-		GFF4501	0.61	-0.1
4,495,421	+		GFF4501	0.61	-0.8
4,495,421	+		GFF4501	0.61	+0.7
4,495,427	+		GFF4501	0.62	-1.5
4,495,429	-		GFF4501	0.62	-2.1
4,495,429	-		GFF4501	0.62	+0.1
4,495,429	-		GFF4501	0.62	-0.9
4,495,429	-		GFF4501	0.62	+1.1
4,495,429	-		GFF4501	0.62	-0.6
4,495,435	-		GFF4501	0.63	-1.5
4,495,435	-		GFF4501	0.63	+0.2
4,495,435	-		GFF4501	0.63	-0.1
4,495,438	+		GFF4501	0.63	-0.8
4,495,449	-		GFF4501	0.64	+0.8
4,495,456	-		GFF4501	0.65	+0.4
4,495,460	-		GFF4501	0.65	+0.2
4,495,485	+		GFF4501	0.68	-1.0
4,495,490	+		GFF4501	0.69	-0.0
4,495,500	+		GFF4501	0.70	-0.9
4,495,500	+		GFF4501	0.70	+0.0
4,495,518	-		GFF4501	0.72	-0.3
4,495,522	+		GFF4501	0.72	-0.6
4,495,530	-		GFF4501	0.73	+1.7
4,495,538	-		GFF4501	0.74	+0.1
4,495,579	+		GFF4501	0.79	-0.6
4,495,588	+		GFF4501	0.80	+0.3
4,495,588	-		GFF4501	0.80	-0.5
4,495,596	-		GFF4501	0.80	-1.9
4,495,596	-		GFF4501	0.80	-0.5
4,495,607	+		GFF4501	0.82	-0.5
4,495,614	+		GFF4501	0.82	+0.0
4,495,614	+		GFF4501	0.82	-0.6
4,495,622	-		GFF4501	0.83	-1.2
4,495,622	-		GFF4501	0.83	-1.1
4,495,655	+		GFF4501	0.87	-0.1
4,495,663	+		GFF4501	0.88	-0.1
4,495,671	+		GFF4501	0.89	-3.0
4,495,671	-		GFF4501	0.89	-2.7
4,495,676	+		GFF4501	0.89	+0.2
4,495,676	+		GFF4501	0.89	-0.6
4,495,684	-				-0.6
4,495,692	+				-0.3
4,495,697	+				-2.9
4,495,697	+				-0.8
4,495,698	+				-0.5
4,495,701	-				-0.7
4,495,710	+				-0.1
4,495,710	+				+0.7
4,495,718	-				+0.4
4,495,744	-				-0.0
4,495,756	-				-0.2
4,495,766	+				+0.7
4,495,766	+				+0.0
4,495,766	+				+1.1
4,495,774	-				-0.6
4,495,776	+				+1.2
4,495,779	-				-0.7
4,495,794	+				+0.2
4,495,794	+				-0.8
4,495,794	+				+1.3
4,495,794	+				-0.1
4,495,794	+				-0.5
4,495,794	+				+0.5
4,495,802	-				+0.1
4,495,802	-				-0.1
4,495,802	-				-1.5
4,495,802	-				+1.8
4,495,802	-				+0.3
4,495,802	-				-1.0
4,495,802	-				+1.0
4,495,840	+				-0.3
4,495,848	-				-0.5
4,495,853	-				-0.5
4,495,853	-				-0.5
4,495,855	+				-1.9
4,495,899	+				+1.8
4,495,900	-				-0.2
4,495,907	-				+0.6
4,495,907	-				-0.1
4,495,938	-				-0.2
4,495,940	-				+0.4
4,495,941	+				-2.0
4,495,951	-				-0.2
4,495,966	+				-3.4
4,495,980	+				-0.8
4,495,987	-				-0.6
4,495,989	+				+1.3
4,495,994	+				-0.3
4,495,994	+				-0.1
4,495,994	+				-2.5
4,495,994	+				-0.8
4,495,994	+				+1.1
4,495,997	-				-1.8
4,496,002	-				+0.0
4,496,002	-				+0.4
4,496,002	-				+1.4
4,496,005	+				+0.8
4,496,005	+				-1.1
4,496,005	+				-0.2
4,496,005	+				-2.2
4,496,006	+				+0.1
4,496,013	-				-1.1
4,496,013	-				+0.4
4,496,013	-				-1.7
4,496,014	-				-0.7
4,496,019	-				+0.3
4,496,019	-				+0.4
4,496,019	-				-0.9
4,496,023	-				+0.7
4,496,042	-				-0.6
4,496,044	+				-1.7
4,496,044	+				+0.4
4,496,050	-				-0.3
4,496,052	+				-0.1
4,496,052	+				+0.5
4,496,059	+				-0.9
4,496,059	+				-1.2
4,496,065	-				-2.1
4,496,067	+				+1.8
4,496,067	-				+0.4
4,496,067	-				-3.3
4,496,073	-				-0.9
4,496,075	+				+0.5
4,496,097	-				-0.1
4,496,116	+				+1.2
4,496,126	+				-1.5
4,496,126	+				-0.1
4,496,126	+				+0.3
4,496,126	+				+1.9
4,496,126	+				-1.7
4,496,134	-				-0.3
4,496,134	-				-0.7
4,496,134	-				-2.5
4,496,134	-				-0.1
4,496,134	-				+0.2
4,496,134	-				-0.2
4,496,134	-				+0.8
4,496,134	-				+0.3
4,496,134	-				-0.6
4,496,145	-				+0.4
4,496,166	-				+1.4
4,496,167	-				+0.0
4,496,172	-				+0.4
4,496,172	-				-0.5
4,496,236	-				-0.5
4,496,247	+				+0.3
4,496,255	-				-0.8
4,496,255	-				+0.2
4,496,256	+				+0.3
4,496,263	-				-0.3
4,496,266	+				-0.5
4,496,307	-				-0.2
4,496,313	+				-1.0
4,496,318	+				-1.0
4,496,319	+				-0.2
4,496,326	+				-0.8
4,496,332	+				-0.9
4,496,354	+				-2.2
4,496,359	+				-0.8
4,496,364	+				-0.5
4,496,364	+				-0.3
4,496,364	+				+0.4
4,496,367	-				-0.8
4,496,368	-				+0.3
4,496,369	+				+0.1
4,496,379	+				-0.3
4,496,382	-				-0.9
4,496,384	+				+0.3
4,496,384	+				+0.5
4,496,384	+				+0.5
4,496,384	+				-0.6
4,496,387	-				+0.9
4,496,387	-				-1.9
4,496,392	-				+0.5
4,496,392	-				-2.2
4,496,392	-				+1.0
4,496,407	+				+0.6
4,496,415	-				-0.0
4,496,417	-				-0.3
4,496,441	+				+0.3
4,496,449	-				+0.2
4,496,451	+				-0.1
4,496,451	+				+0.1
4,496,472	+		GFF4502	0.10	-0.7
4,496,479	+		GFF4502	0.11	+0.3
4,496,479	+		GFF4502	0.11	+0.0
4,496,485	-		GFF4502	0.12	-1.5
4,496,487	-		GFF4502	0.12	+0.6
4,496,487	-		GFF4502	0.12	+0.6
4,496,487	-		GFF4502	0.12	+0.1
4,496,487	-		GFF4502	0.12	+0.4
4,496,503	-		GFF4502	0.15	-0.9
4,496,503	-		GFF4502	0.15	-2.5
4,496,517	+		GFF4502	0.17	-0.6
4,496,524	+		GFF4502	0.18	+0.5
4,496,524	+		GFF4502	0.18	-0.1
4,496,524	+		GFF4502	0.18	-0.4
4,496,532	-		GFF4502	0.19	+0.4
4,496,532	-		GFF4502	0.19	-1.5
4,496,534	+		GFF4502	0.19	-0.2
4,496,534	+		GFF4502	0.19	-0.3
4,496,534	+		GFF4502	0.19	+1.0
4,496,534	+		GFF4502	0.19	-0.4
4,496,534	+		GFF4502	0.19	+0.0
4,496,534	+		GFF4502	0.19	-1.7
4,496,536	-		GFF4502	0.20	-0.7
4,496,536	-		GFF4502	0.20	+0.3
4,496,539	+		GFF4502	0.20	-0.1
4,496,542	+		GFF4502	0.20	+0.5
4,496,542	-		GFF4502	0.20	-0.3
4,496,542	-		GFF4502	0.20	-2.6
4,496,542	-		GFF4502	0.20	+1.4
4,496,544	+		GFF4502	0.21	-0.8
4,496,544	+		GFF4502	0.21	-0.2
4,496,547	+		GFF4502	0.21	+1.1
4,496,547	-		GFF4502	0.21	+1.3
4,496,552	-		GFF4502	0.22	+0.4
4,496,561	+		GFF4502	0.23	+0.0
4,496,561	+		GFF4502	0.23	-0.0
4,496,562	-		GFF4502	0.23	+0.4
4,496,562	-		GFF4502	0.23	+0.1
4,496,601	+		GFF4502	0.29	+1.0
4,496,634	+		GFF4502	0.34	-0.1
4,496,634	+		GFF4502	0.34	+0.2
4,496,634	+		GFF4502	0.34	-1.8
4,496,634	+		GFF4502	0.34	-0.7
4,496,634	+		GFF4502	0.34	-0.5
4,496,634	+		GFF4502	0.34	-0.2
4,496,634	+		GFF4502	0.34	-2.2
4,496,642	-		GFF4502	0.35	+0.4
4,496,642	-		GFF4502	0.35	+1.0
4,496,642	-		GFF4502	0.35	+0.2
4,496,642	-		GFF4502	0.35	-0.0
4,496,674	+		GFF4502	0.40	+0.3
4,496,692	+		GFF4502	0.43	+0.4
4,496,692	+		GFF4502	0.43	-0.2
4,496,700	-		GFF4502	0.44	+0.1
4,496,705	-		GFF4502	0.45	+0.3
4,496,712	+		GFF4502	0.46	+0.3
4,496,717	+		GFF4502	0.46	+1.0
4,496,717	+		GFF4502	0.46	+0.1
4,496,722	+		GFF4502	0.47	-0.4
4,496,722	+		GFF4502	0.47	+0.0
4,496,724	+		GFF4502	0.47	-1.1
4,496,725	-		GFF4502	0.48	+0.8
4,496,725	-		GFF4502	0.48	+0.4
4,496,730	-		GFF4502	0.48	+0.3
4,496,730	-		GFF4502	0.48	-0.5
4,496,730	-		GFF4502	0.48	-0.3
4,496,730	-		GFF4502	0.48	-1.1
4,496,732	-		GFF4502	0.49	-0.6
4,496,755	+		GFF4502	0.52	+0.1
4,496,757	-		GFF4502	0.52	+0.7
4,496,783	-		GFF4502	0.56	-0.6
4,496,797	+		GFF4502	0.58	-0.3
4,496,797	+		GFF4502	0.58	+0.4
4,496,797	+		GFF4502	0.58	-0.4
4,496,801	-		GFF4502	0.59	-1.7
4,496,826	+		GFF4502	0.63	+2.2
4,496,831	+		GFF4502	0.63	-0.2
4,496,841	+		GFF4502	0.65	-0.6
4,496,847	-		GFF4502	0.66	+0.3
4,496,858	+		GFF4502	0.67	+0.3
4,496,905	-		GFF4502	0.74	+0.1
4,496,911	+		GFF4502	0.75	+0.0
4,496,919	+		GFF4502	0.76	-0.7
4,496,919	+		GFF4502	0.76	-1.2
4,496,919	+		GFF4502	0.76	+0.1
4,496,919	+		GFF4502	0.76	-0.7
4,496,919	-		GFF4502	0.76	+0.3
4,496,920	+		GFF4502	0.76	-1.6
4,496,927	-		GFF4502	0.77	-1.2
4,496,939	+		GFF4502	0.79	-0.1
4,496,939	+		GFF4502	0.79	-2.3
4,496,947	-		GFF4502	0.80	-0.5
4,496,947	-		GFF4502	0.80	-0.4
4,496,947	-		GFF4502	0.80	-0.1
4,496,993	-		GFF4502	0.87	+0.4
4,496,993	-		GFF4502	0.87	-0.5
4,497,068	+				-0.3
4,497,073	+				+0.0
4,497,073	+				+0.3
4,497,073	+				-0.5
4,497,073	+				+0.9
4,497,073	+				-0.9
4,497,073	+				+0.2
4,497,073	+				+0.7
4,497,076	-				-0.8
4,497,076	-				+1.3
4,497,079	+				-0.1
4,497,081	-				-0.0
4,497,081	-				+0.5
4,497,081	-				+0.4
4,497,081	-				+0.1
4,497,089	+				+0.1
4,497,089	+				-0.5
4,497,089	+				+0.4
4,497,089	+				-0.2
4,497,089	+				-0.1
4,497,089	+				+0.4
4,497,089	+				+0.5
4,497,097	-				-0.1
4,497,097	-				+0.2
4,497,097	-				+0.4
4,497,097	-				-0.7
4,497,097	-				-1.0
4,497,114	+				+0.1
4,497,115	+				+0.7
4,497,115	+				+0.1
4,497,120	+				+0.2
4,497,127	-				-1.0
4,497,142	-				-0.1
4,497,142	-				-0.8
4,497,146	-				-1.6
4,497,160	+				-0.2
4,497,178	+				+0.1
4,497,207	+				-0.7
4,497,215	-				+0.1
4,497,217	+				-0.8
4,497,217	+				-0.7
4,497,217	+				-0.3
4,497,217	+				-1.2
4,497,217	+				+0.2
4,497,225	-				+0.3
4,497,225	-				-2.9
4,497,225	-				-1.5
4,497,225	-				+0.6
4,497,225	-				-0.6
4,497,226	+				-2.1
4,497,227	+				+0.0
4,497,232	+				+0.3
4,497,232	+				+1.0
4,497,234	-				+0.8
4,497,240	-				-0.1
4,497,240	-				-1.6
4,497,242	+				-0.1
4,497,249	+				-0.2
4,497,249	+				-0.2
4,497,256	-				-0.9
4,497,258	+				+0.7
4,497,263	+				-0.7
4,497,270	+				+0.8
4,497,270	+				-2.2
4,497,270	+				-0.2
4,497,271	-				-1.0
4,497,271	-				-0.8
4,497,271	-				-1.9
4,497,278	-				+1.3
4,497,278	-				-0.5
4,497,281	+				-0.5
4,497,283	-				-0.1
4,497,283	-				-0.3
4,497,289	-				-2.0
4,497,289	-				+0.6
4,497,306	-				-0.3
4,497,306	-				-1.4
4,497,306	-				-0.3
4,497,314	+				-0.5
4,497,314	+				-0.5
4,497,314	+				-0.0
4,497,314	+				-1.2
4,497,314	+				+1.0
4,497,321	+				-1.6
4,497,322	-				+0.1
4,497,322	-				+0.3
4,497,322	-				+0.1
4,497,322	-				-0.3
4,497,322	-				-0.7
4,497,322	-				+0.8
4,497,329	-				-1.7
4,497,382	+				+0.9
4,497,382	+				-0.9
4,497,382	+				-1.8
4,497,383	-				+0.4
4,497,387	+				-0.6
4,497,387	+				+1.3
4,497,387	+				-0.2
4,497,390	-				+0.5
4,497,390	-				-1.2
4,497,390	-				+0.3
4,497,390	-				-0.7
4,497,395	-				-1.3
4,497,413	+				-1.9
4,497,413	+				-0.2
4,497,413	+				-0.5
4,497,413	+				-2.2
4,497,413	+				+0.9
4,497,413	+				+0.8
4,497,426	-				+1.3
4,497,431	-				+0.2
4,497,432	-				-0.3
4,497,438	+				+0.9
4,497,438	+				+0.8
4,497,438	+				+1.2
4,497,438	+				-0.8
4,497,443	+		GFF4503	0.10	-1.2
4,497,443	+		GFF4503	0.10	+0.7
4,497,446	-		GFF4503	0.10	-2.0
4,497,446	-		GFF4503	0.10	+0.2
4,497,446	-		GFF4503	0.10	+0.8
4,497,451	-		GFF4503	0.11	-0.3
4,497,466	-		GFF4503	0.11	-0.6
4,497,468	+		GFF4503	0.11	+0.3
4,497,468	+		GFF4503	0.11	+0.1
4,497,468	+		GFF4503	0.11	+1.5
4,497,473	+		GFF4503	0.12	+0.3
4,497,488	+		GFF4503	0.12	-2.0
4,497,496	-		GFF4503	0.13	-0.7
4,497,501	+		GFF4503	0.13	+1.1
4,497,506	+		GFF4503	0.13	+0.4
4,497,509	-		GFF4503	0.13	+0.1
4,497,523	-		GFF4503	0.14	-0.2
4,497,528	-		GFF4503	0.14	+0.3
4,497,537	-		GFF4503	0.15	-0.2
4,497,539	+		GFF4503	0.15	-0.9
4,497,549	+		GFF4503	0.15	+0.1
4,497,551	-		GFF4503	0.15	-1.1
4,497,551	-		GFF4503	0.15	+0.1
4,497,551	-		GFF4503	0.15	+0.4
4,497,557	-		GFF4503	0.16	+0.2
4,497,561	+		GFF4503	0.16	+0.7
4,497,562	+		GFF4503	0.16	+0.1
4,497,566	+		GFF4503	0.16	-1.6
4,497,567	+		GFF4503	0.16	-0.9
4,497,567	+		GFF4503	0.16	-2.1
4,497,569	-		GFF4503	0.16	+0.4
4,497,574	-		GFF4503	0.17	+0.3
4,497,575	-		GFF4503	0.17	-0.1
4,497,584	-		GFF4503	0.17	+0.0
4,497,592	-		GFF4503	0.17	-0.1
4,497,618	+		GFF4503	0.19	-1.4
4,497,620	+		GFF4503	0.19	+0.8
4,497,631	-		GFF4503	0.19	-0.0
4,497,631	-		GFF4503	0.19	+0.8
4,497,631	-		GFF4503	0.19	-1.1
4,497,653	+		GFF4503	0.20	-2.8
4,497,661	-		GFF4503	0.21	+0.0
4,497,686	+		GFF4503	0.22	-1.6
4,497,696	-		GFF4503	0.23	+1.7
4,497,701	-		GFF4503	0.23	-0.5
4,497,709	+		GFF4503	0.23	-2.7
4,497,710	+		GFF4503	0.23	-0.4
4,497,717	-		GFF4503	0.24	-0.8
4,497,739	+		GFF4503	0.25	+1.0
4,497,739	+		GFF4503	0.25	-0.7
4,497,742	-		GFF4503	0.25	+0.4
4,497,744	+		GFF4503	0.25	-0.5
4,497,747	-		GFF4503	0.25	-0.7
4,497,747	-		GFF4503	0.25	-0.2
4,497,747	-		GFF4503	0.25	+0.6
4,497,747	-		GFF4503	0.25	-0.4
4,497,751	+		GFF4503	0.25	-0.4
4,497,778	+		GFF4503	0.27	+0.4
4,497,785	+		GFF4503	0.27	-1.0
4,497,799	+		GFF4503	0.28	-0.9
4,497,799	+		GFF4503	0.28	+0.2
4,497,807	-		GFF4503	0.28	-0.4
4,497,807	-		GFF4503	0.28	+0.3
4,497,817	-		GFF4503	0.29	+0.6
4,497,836	-		GFF4503	0.29	+0.0
4,497,841	-		GFF4503	0.30	+0.2
4,497,841	-		GFF4503	0.30	-0.4
4,497,847	+		GFF4503	0.30	-0.5
4,497,850	-		GFF4503	0.30	-2.1
4,497,850	-		GFF4503	0.30	+0.1
4,497,850	-		GFF4503	0.30	+0.1
4,497,855	+		GFF4503	0.30	-0.5
4,497,857	+		GFF4503	0.30	+0.1
4,497,863	-		GFF4503	0.31	+0.2
4,497,879	+		GFF4503	0.32	-0.1
4,497,879	+		GFF4503	0.32	+0.2
4,497,887	-		GFF4503	0.32	+0.3
4,497,887	-		GFF4503	0.32	+0.6
4,497,890	+		GFF4503	0.32	+0.8
4,497,893	-		GFF4503	0.32	+0.6
4,497,895	+		GFF4503	0.32	+1.5
4,497,895	+		GFF4503	0.32	+0.4
4,497,895	+		GFF4503	0.32	+0.9
4,497,895	+		GFF4503	0.32	-0.3
4,497,903	-		GFF4503	0.33	-0.0
4,497,903	-		GFF4503	0.33	-0.6
4,497,931	-		GFF4503	0.34	-0.4
4,497,958	-		GFF4503	0.35	+1.1
4,497,985	+		GFF4503	0.37	+1.4
4,498,001	+		GFF4503	0.38	+0.4
4,498,001	+		GFF4503	0.38	-0.4
4,498,016	+		GFF4503	0.38	-0.7
4,498,016	+		GFF4503	0.38	+0.6
4,498,016	+		GFF4503	0.38	-0.7
4,498,016	+		GFF4503	0.38	+0.2
4,498,016	+		GFF4503	0.38	-1.4
4,498,037	-		GFF4503	0.39	+0.8
4,498,044	+		GFF4503	0.40	+0.2
4,498,049	+		GFF4503	0.40	+0.1
4,498,075	+		GFF4503	0.41	+1.0
4,498,078	-		GFF4503	0.41	+0.5