Strain Fitness in Sphingobium sp. HT1-2 around GFF4221

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,236,473	+		GFF4220	0.13	-0.0
4,236,510	-		GFF4220	0.16	+0.4
4,236,510	-		GFF4220	0.16	-0.0
4,236,526	-		GFF4220	0.17	-0.1
4,236,528	+		GFF4220	0.18	-1.7
4,236,528	+		GFF4220	0.18	-1.2
4,236,536	-		GFF4220	0.18	-0.8
4,236,550	-		GFF4220	0.20	-0.2
4,236,562	+		GFF4220	0.21	-0.2
4,236,586	+		GFF4220	0.23	-1.5
4,236,594	-		GFF4220	0.24	-0.8
4,236,594	-		GFF4220	0.24	+0.7
4,236,596	-		GFF4220	0.24	-0.6
4,236,658	+		GFF4220	0.30	-2.0
4,236,660	+		GFF4220	0.30	-0.8
4,236,663	-		GFF4220	0.30	-1.1
4,236,671	-		GFF4220	0.31	-2.1
4,236,673	+		GFF4220	0.31	-0.0
4,236,673	+		GFF4220	0.31	+0.9
4,236,673	+		GFF4220	0.31	-1.8
4,236,684	+		GFF4220	0.32	-1.8
4,236,691	-		GFF4220	0.33	-1.0
4,236,709	+		GFF4220	0.34	-1.1
4,236,727	+		GFF4220	0.36	-2.3
4,236,732	+		GFF4220	0.36	-2.8
4,236,740	+		GFF4220	0.37	-0.8
4,236,750	+		GFF4220	0.38	-0.7
4,236,752	-		GFF4220	0.38	-1.8
4,236,754	+		GFF4220	0.38	-1.2
4,236,754	+		GFF4220	0.38	-1.4
4,236,762	-		GFF4220	0.39	-1.8
4,236,765	+		GFF4220	0.39	-0.7
4,236,806	+		GFF4220	0.43	+0.3
4,236,812	+		GFF4220	0.44	+0.8
4,236,817	+		GFF4220	0.44	-2.2
4,236,844	+		GFF4220	0.47	-0.1
4,236,849	+		GFF4220	0.47	-2.6
4,236,856	+		GFF4220	0.48	-0.2
4,236,856	+		GFF4220	0.48	-0.6
4,236,857	-		GFF4220	0.48	-0.4
4,236,857	-		GFF4220	0.48	-1.7
4,236,864	-		GFF4220	0.49	-2.4
4,236,864	-		GFF4220	0.49	-1.2
4,236,864	-		GFF4220	0.49	-1.3
4,236,864	-		GFF4220	0.49	-0.8
4,236,914	-		GFF4220	0.53	+1.2
4,236,914	-		GFF4220	0.53	-1.6
4,236,920	-		GFF4220	0.54	-1.4
4,236,983	-		GFF4220	0.59	-0.7
4,236,996	+		GFF4220	0.61	-2.1
4,236,996	+		GFF4220	0.61	-1.7
4,237,004	-		GFF4220	0.61	-0.8
4,237,004	-		GFF4220	0.61	+0.5
4,237,004	-		GFF4220	0.61	-1.4
4,237,004	-		GFF4220	0.61	-0.6
4,237,015	+		GFF4220	0.62	-1.2
4,237,015	+		GFF4220	0.62	-1.6
4,237,015	+		GFF4220	0.62	-2.2
4,237,028	-		GFF4220	0.64	-0.9
4,237,028	-		GFF4220	0.64	-1.9
4,237,030	+		GFF4220	0.64	-1.8
4,237,035	-		GFF4220	0.64	-0.6
4,237,047	+		GFF4220	0.65	-2.3
4,237,059	+		GFF4220	0.66	-2.4
4,237,074	+		GFF4220	0.68	-1.0
4,237,082	-		GFF4220	0.69	-1.8
4,237,130	+		GFF4220	0.73	-1.9
4,237,140	+		GFF4220	0.74	-1.3
4,237,145	+		GFF4220	0.74	-0.2
4,237,145	+		GFF4220	0.74	+0.1
4,237,145	+		GFF4220	0.74	-1.4
4,237,145	+		GFF4220	0.74	-0.9
4,237,145	+		GFF4220	0.74	+0.3
4,237,148	-		GFF4220	0.75	-1.4
4,237,148	-		GFF4220	0.75	-0.8
4,237,149	+		GFF4220	0.75	+1.2
4,237,149	+		GFF4220	0.75	-2.3
4,237,149	+		GFF4220	0.75	+0.2
4,237,152	-		GFF4220	0.75	+1.3
4,237,153	-		GFF4220	0.75	-0.5
4,237,153	-		GFF4220	0.75	-1.3
4,237,154	+		GFF4220	0.75	+1.0
4,237,154	+		GFF4220	0.75	-2.4
4,237,154	+		GFF4220	0.75	-1.6
4,237,154	+		GFF4220	0.75	-1.3
4,237,154	+		GFF4220	0.75	+0.2
4,237,154	+		GFF4220	0.75	-0.6
4,237,154	+		GFF4220	0.75	+0.0
4,237,154	+		GFF4220	0.75	-1.4
4,237,154	+		GFF4220	0.75	-1.2
4,237,154	+		GFF4220	0.75	+0.0
4,237,157	-		GFF4220	0.76	-1.1
4,237,159	+		GFF4220	0.76	-0.4
4,237,159	+		GFF4220	0.76	-3.0
4,237,162	-		GFF4220	0.76	-2.6
4,237,162	-		GFF4220	0.76	-0.1
4,237,162	-		GFF4220	0.76	-1.0
4,237,162	-		GFF4220	0.76	-1.6
4,237,162	-		GFF4220	0.76	-0.2
4,237,167	-		GFF4220	0.76	-1.9
4,237,167	-		GFF4220	0.76	-2.5
4,237,167	-		GFF4220	0.76	-0.4
4,237,167	-		GFF4220	0.76	-1.7
4,237,169	+		GFF4220	0.77	-2.1
4,237,178	-		GFF4220	0.77	-1.6
4,237,196	-		GFF4220	0.79	-0.8
4,237,196	-		GFF4220	0.79	-0.8
4,237,201	-		GFF4220	0.80	-0.6
4,237,205	-		GFF4220	0.80	-0.1
4,237,206	-		GFF4220	0.80	-0.1
4,237,209	+		GFF4220	0.80	-1.6
4,237,209	+		GFF4220	0.80	-1.1
4,237,209	+		GFF4220	0.80	-0.1
4,237,217	-		GFF4220	0.81	+0.0
4,237,217	-		GFF4220	0.81	-1.4
4,237,217	-		GFF4220	0.81	-0.6
4,237,217	-		GFF4220	0.81	-2.1
4,237,226	+		GFF4220	0.82	+0.1
4,237,234	+		GFF4220	0.83	+0.8
4,237,236	+		GFF4220	0.83	+0.9
4,237,240	-		GFF4220	0.83	-1.2
4,237,240	-		GFF4220	0.83	-1.4
4,237,242	-		GFF4220	0.83	-2.2
4,237,251	+		GFF4220	0.84	-1.4
4,237,251	+		GFF4220	0.84	-2.1
4,237,253	+		GFF4220	0.84	-0.7
4,237,256	+		GFF4220	0.85	-1.7
4,237,261	+		GFF4220	0.85	-1.8
4,237,274	+		GFF4220	0.86	-1.1
4,237,280	+		GFF4220	0.87	+0.7
4,237,280	+		GFF4220	0.87	-1.4
4,237,280	+		GFF4220	0.87	+0.4
4,237,280	+		GFF4220	0.87	-0.5
4,237,288	-		GFF4220	0.88	-1.2
4,237,288	-		GFF4220	0.88	-0.9
4,237,297	+		GFF4220	0.88	+0.6
4,237,305	-		GFF4220	0.89	+0.3
4,237,312	-		GFF4220	0.90	-3.1
4,237,349	-				-1.3
4,237,366	-				-0.6
4,237,366	-				-0.9
4,237,367	+				-2.2
4,237,394	-				-0.9
4,237,461	+				+1.0
4,237,510	-				-1.5
4,237,511	+				+0.0
4,237,520	+				+0.6
4,237,541	+				-0.4
4,237,544	-				-0.6
4,237,546	+				-0.9
4,237,546	+				-1.7
4,237,546	+				-0.6
4,237,546	+				-0.6
4,237,546	+				-0.6
4,237,546	+				-0.3
4,237,546	+				-1.3
4,237,546	+				-2.0
4,237,546	+				+1.2
4,237,546	+				+0.0
4,237,554	-				-0.4
4,237,554	-				-1.7
4,237,554	-				-1.0
4,237,554	-				-0.7
4,237,554	-				-0.9
4,237,554	-				-1.2
4,237,562	+				-1.3
4,237,567	+				-0.6
4,237,567	+				+0.4
4,237,568	-				-1.4
4,237,575	-				-0.4
4,237,575	-				-0.1
4,237,575	-				+0.0
4,237,575	-				-2.1
4,237,576	+				-1.3
4,237,581	+				-0.6
4,237,584	+				+0.7
4,237,584	-				-1.0
4,237,595	+				-0.8
4,237,603	-				-1.8
4,237,609	-				-0.1
4,237,611	+				-1.8
4,237,613	+				-1.1
4,237,613	+				-1.5
4,237,632	+		GFF4221	0.11	-0.1
4,237,650	+		GFF4221	0.12	-2.2
4,237,664	-		GFF4221	0.13	+0.0
4,237,664	-		GFF4221	0.13	-0.2
4,237,665	+		GFF4221	0.13	-0.5
4,237,671	-		GFF4221	0.14	-0.9
4,237,673	-		GFF4221	0.14	-2.4
4,237,673	-		GFF4221	0.14	-1.1
4,237,678	+		GFF4221	0.14	-0.6
4,237,680	+		GFF4221	0.14	-0.8
4,237,687	+		GFF4221	0.15	+0.2
4,237,692	+		GFF4221	0.15	+0.4
4,237,692	+		GFF4221	0.15	-0.6
4,237,695	-		GFF4221	0.15	-1.4
4,237,695	-		GFF4221	0.15	+0.4
4,237,703	+		GFF4221	0.16	-2.0
4,237,708	+		GFF4221	0.16	-0.5
4,237,708	+		GFF4221	0.16	-0.3
4,237,714	+		GFF4221	0.16	-1.0
4,237,714	+		GFF4221	0.16	-0.8
4,237,716	-		GFF4221	0.17	-0.7
4,237,722	-		GFF4221	0.17	-0.2
4,237,722	-		GFF4221	0.17	+0.4
4,237,744	+		GFF4221	0.18	-0.9
4,237,763	+		GFF4221	0.20	-1.1
4,237,771	-		GFF4221	0.20	-0.2
4,237,771	-		GFF4221	0.20	-1.7
4,237,771	-		GFF4221	0.20	-0.6
4,237,775	+		GFF4221	0.20	-0.1
4,237,788	-		GFF4221	0.21	-1.7
4,237,788	-		GFF4221	0.21	-1.0
4,237,807	-		GFF4221	0.23	-0.2
4,237,817	-		GFF4221	0.23	-1.9
4,237,825	-		GFF4221	0.24	-1.8
4,237,864	+		GFF4221	0.26	-0.9
4,237,865	-		GFF4221	0.27	+1.4
4,237,870	-		GFF4221	0.27	-1.3
4,237,870	-		GFF4221	0.27	-1.6
4,237,872	-		GFF4221	0.27	-0.9
4,237,887	+		GFF4221	0.28	-1.3
4,237,897	+		GFF4221	0.29	+0.9
4,237,897	+		GFF4221	0.29	+0.2
4,237,905	-		GFF4221	0.29	-0.3
4,237,906	-		GFF4221	0.29	-0.4
4,237,907	-		GFF4221	0.29	-0.2
4,237,907	-		GFF4221	0.29	-1.2
4,237,908	+		GFF4221	0.29	-1.6
4,237,908	+		GFF4221	0.29	-3.3
4,237,908	+		GFF4221	0.29	-0.2
4,237,908	+		GFF4221	0.29	-0.6
4,237,908	+		GFF4221	0.29	-1.3
4,237,908	+		GFF4221	0.29	-2.1
4,237,908	+		GFF4221	0.29	-2.0
4,237,916	-		GFF4221	0.30	-0.4
4,237,916	-		GFF4221	0.30	-0.9
4,237,916	-		GFF4221	0.30	-2.0
4,237,916	-		GFF4221	0.30	-2.0
4,237,916	-		GFF4221	0.30	+0.9
4,237,931	+		GFF4221	0.31	-1.7
4,237,939	-		GFF4221	0.31	-1.0
4,237,942	-		GFF4221	0.32	-0.1
4,237,961	+		GFF4221	0.33	-0.7
4,237,966	+		GFF4221	0.33	-1.8
4,237,974	-		GFF4221	0.34	-1.8
4,237,976	+		GFF4221	0.34	-1.4
4,237,981	+		GFF4221	0.34	+0.7
4,237,984	-		GFF4221	0.34	-1.1
4,237,989	-		GFF4221	0.35	-0.2
4,238,004	-		GFF4221	0.36	-0.5
4,238,006	-		GFF4221	0.36	-1.1
4,238,008	+		GFF4221	0.36	+0.4
4,238,008	+		GFF4221	0.36	-2.3
4,238,008	-		GFF4221	0.36	-2.1
4,238,016	-		GFF4221	0.37	-1.0
4,238,026	+		GFF4221	0.37	-0.8
4,238,031	+		GFF4221	0.38	+0.6
4,238,031	+		GFF4221	0.38	-2.5
4,238,031	+		GFF4221	0.38	+0.6
4,238,031	+		GFF4221	0.38	-0.4
4,238,031	+		GFF4221	0.38	-0.4
4,238,031	+		GFF4221	0.38	-1.6
4,238,031	+		GFF4221	0.38	-2.2
4,238,031	+		GFF4221	0.38	+0.2
4,238,031	+		GFF4221	0.38	-1.1
4,238,031	+		GFF4221	0.38	+0.1
4,238,031	+		GFF4221	0.38	-0.9
4,238,031	+		GFF4221	0.38	-1.0
4,238,032	-		GFF4221	0.38	+0.1
4,238,034	-		GFF4221	0.38	-1.7
4,238,037	+		GFF4221	0.38	-1.0
4,238,037	-		GFF4221	0.38	-2.8
4,238,037	-		GFF4221	0.38	-1.1
4,238,039	-		GFF4221	0.38	+0.8
4,238,039	-		GFF4221	0.38	-1.1
4,238,039	-		GFF4221	0.38	-0.1
4,238,039	-		GFF4221	0.38	-0.3
4,238,039	-		GFF4221	0.38	-1.4
4,238,039	-		GFF4221	0.38	-1.2
4,238,039	-		GFF4221	0.38	-1.4
4,238,039	-		GFF4221	0.38	-1.0
4,238,039	-		GFF4221	0.38	-2.1
4,238,039	-		GFF4221	0.38	-1.6
4,238,039	-		GFF4221	0.38	+0.3
4,238,039	-		GFF4221	0.38	-0.6
4,238,039	-		GFF4221	0.38	-0.2
4,238,039	-		GFF4221	0.38	-0.5
4,238,039	-		GFF4221	0.38	-0.6
4,238,039	-		GFF4221	0.38	-0.1
4,238,039	-		GFF4221	0.38	-1.8
4,238,039	-		GFF4221	0.38	+0.1
4,238,039	-		GFF4221	0.38	-2.4
4,238,039	-		GFF4221	0.38	-1.4
4,238,054	-		GFF4221	0.39	-0.4
4,238,063	+		GFF4221	0.40	+0.2
4,238,087	-		GFF4221	0.41	+0.1
4,238,089	+		GFF4221	0.41	-0.3
4,238,089	+		GFF4221	0.41	-2.1
4,238,089	+		GFF4221	0.41	-1.8
4,238,089	+		GFF4221	0.41	-1.6
4,238,089	+		GFF4221	0.41	-3.2
4,238,097	-		GFF4221	0.42	-0.1
4,238,097	-		GFF4221	0.42	-1.1
4,238,097	-		GFF4221	0.42	-1.8
4,238,097	-		GFF4221	0.42	+0.3
4,238,097	-		GFF4221	0.42	-0.8
4,238,097	-		GFF4221	0.42	+0.4
4,238,097	-		GFF4221	0.42	-2.0
4,238,097	-		GFF4221	0.42	-0.4
4,238,104	-		GFF4221	0.43	-1.1
4,238,109	-		GFF4221	0.43	+1.0
4,238,122	+		GFF4221	0.44	-2.9
4,238,122	+		GFF4221	0.44	-1.7
4,238,130	-		GFF4221	0.44	-0.6
4,238,137	+		GFF4221	0.45	-0.1
4,238,137	+		GFF4221	0.45	-2.3
4,238,137	+		GFF4221	0.45	-0.4
4,238,137	+		GFF4221	0.45	-1.4
4,238,161	+		GFF4221	0.46	-1.8
4,238,166	+		GFF4221	0.47	-1.6
4,238,174	+		GFF4221	0.47	-0.1
4,238,181	-		GFF4221	0.48	-1.1
4,238,191	+		GFF4221	0.48	+0.4
4,238,196	+		GFF4221	0.49	-0.4
4,238,196	+		GFF4221	0.49	-0.3
4,238,196	+		GFF4221	0.49	-2.1
4,238,196	+		GFF4221	0.49	-1.3
4,238,199	-		GFF4221	0.49	-0.2
4,238,204	-		GFF4221	0.49	-0.3
4,238,204	-		GFF4221	0.49	-2.0
4,238,204	-		GFF4221	0.49	-2.0
4,238,205	+		GFF4221	0.49	-1.8
4,238,206	+		GFF4221	0.49	-1.7
4,238,213	-		GFF4221	0.50	-1.0
4,238,214	-		GFF4221	0.50	-0.1
4,238,224	+		GFF4221	0.51	+0.2
4,238,232	-		GFF4221	0.51	-1.2
4,238,234	+		GFF4221	0.51	-2.1
4,238,237	-		GFF4221	0.51	-1.6
4,238,242	-		GFF4221	0.52	-1.0
4,238,242	-		GFF4221	0.52	-1.6
4,238,274	+		GFF4221	0.54	-2.2
4,238,274	+		GFF4221	0.54	-0.0
4,238,282	-		GFF4221	0.54	-1.2
4,238,282	-		GFF4221	0.54	-3.5
4,238,299	+		GFF4221	0.56	+0.1
4,238,313	+		GFF4221	0.56	-0.7
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4,238,872	+				-0.8
4,238,872	+				+0.7
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4,238,880	-				+0.6
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4,238,902	-				+0.2
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4,238,912	-				+0.3
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