Strain Fitness in Sphingobium sp. HT1-2 around GFF2921

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,988,934	+		GFF2920	0.63	-1.3
2,988,936	+		GFF2920	0.63	-1.3
2,988,936	+		GFF2920	0.63	+0.6
2,988,963	+		GFF2920	0.65	+0.4
2,989,004	+		GFF2920	0.66	+0.0
2,989,004	+		GFF2920	0.66	-0.3
2,989,004	+		GFF2920	0.66	+0.6
2,989,004	+		GFF2920	0.66	+0.7
2,989,004	+		GFF2920	0.66	-0.3
2,989,004	+		GFF2920	0.66	-1.9
2,989,004	+		GFF2920	0.66	+1.4
2,989,004	+		GFF2920	0.66	-0.8
2,989,004	+		GFF2920	0.66	+0.7
2,989,012	-		GFF2920	0.67	-0.8
2,989,012	-		GFF2920	0.67	+0.4
2,989,012	-		GFF2920	0.67	-0.5
2,989,012	-		GFF2920	0.67	+0.0
2,989,012	-		GFF2920	0.67	-0.5
2,989,012	-		GFF2920	0.67	-2.2
2,989,012	-		GFF2920	0.67	+0.8
2,989,012	-		GFF2920	0.67	-0.6
2,989,012	-		GFF2920	0.67	-1.5
2,989,012	-		GFF2920	0.67	+0.4
2,989,012	-		GFF2920	0.67	+0.1
2,989,012	-		GFF2920	0.67	-0.6
2,989,017	+		GFF2920	0.67	+2.0
2,989,041	+		GFF2920	0.68	-0.3
2,989,044	-		GFF2920	0.68	-0.3
2,989,062	+		GFF2920	0.69	-1.2
2,989,083	+		GFF2920	0.70	-1.4
2,989,083	+		GFF2920	0.70	+1.1
2,989,090	-		GFF2920	0.70	-1.6
2,989,090	-		GFF2920	0.70	+1.1
2,989,092	+		GFF2920	0.70	+1.0
2,989,092	+		GFF2920	0.70	+1.3
2,989,109	+		GFF2920	0.71	-0.3
2,989,111	-		GFF2920	0.71	+0.9
2,989,113	+		GFF2920	0.71	-0.5
2,989,118	+		GFF2920	0.71	+1.6
2,989,121	-		GFF2920	0.71	+0.9
2,989,135	+		GFF2920	0.72	+0.2
2,989,135	+		GFF2920	0.72	+0.4
2,989,138	-		GFF2920	0.72	-1.7
2,989,138	-		GFF2920	0.72	-0.2
2,989,143	-		GFF2920	0.72	+0.8
2,989,153	-		GFF2920	0.73	-1.6
2,989,160	-		GFF2920	0.73	+1.2
2,989,165	+		GFF2920	0.73	+0.9
2,989,173	+		GFF2920	0.73	+1.2
2,989,200	+		GFF2920	0.75	+0.1
2,989,200	+		GFF2920	0.75	-1.3
2,989,202	+		GFF2920	0.75	+0.3
2,989,208	-		GFF2920	0.75	-0.3
2,989,212	+		GFF2920	0.75	+1.6
2,989,220	-		GFF2920	0.75	-0.6
2,989,220	-		GFF2920	0.75	-0.7
2,989,220	-		GFF2920	0.75	+0.3
2,989,220	-		GFF2920	0.75	-0.2
2,989,220	-		GFF2920	0.75	+0.2
2,989,220	-		GFF2920	0.75	+0.9
2,989,220	-		GFF2920	0.75	-0.7
2,989,231	+		GFF2920	0.76	+0.0
2,989,239	-		GFF2920	0.76	-0.2
2,989,239	-		GFF2920	0.76	+0.7
2,989,247	-		GFF2920	0.76	+0.5
2,989,247	-		GFF2920	0.76	-0.0
2,989,258	+		GFF2920	0.77	-0.5
2,989,266	+		GFF2920	0.77	+0.3
2,989,266	-		GFF2920	0.77	-0.8
2,989,303	+		GFF2920	0.79	-2.2
2,989,303	+		GFF2920	0.79	-0.5
2,989,311	-		GFF2920	0.79	-0.5
2,989,319	+		GFF2920	0.79	-0.3
2,989,321	+		GFF2920	0.80	-1.0
2,989,326	+		GFF2920	0.80	+0.1
2,989,329	+		GFF2920	0.80	-0.3
2,989,331	+		GFF2920	0.80	-2.6
2,989,331	+		GFF2920	0.80	+0.4
2,989,331	+		GFF2920	0.80	-0.5
2,989,331	+		GFF2920	0.80	-1.2
2,989,331	+		GFF2920	0.80	-0.3
2,989,331	+		GFF2920	0.80	+0.8
2,989,331	+		GFF2920	0.80	-2.1
2,989,334	-		GFF2920	0.80	+0.7
2,989,336	+		GFF2920	0.80	-1.3
2,989,339	-		GFF2920	0.80	-0.6
2,989,339	-		GFF2920	0.80	+0.0
2,989,339	-		GFF2920	0.80	+0.3
2,989,339	-		GFF2920	0.80	+0.8
2,989,344	-		GFF2920	0.81	+0.6
2,989,480	+		GFF2920	0.86	+0.7
2,989,486	+		GFF2920	0.86	-2.2
2,989,491	+		GFF2920	0.87	-0.4
2,989,494	-		GFF2920	0.87	-1.0
2,989,494	-		GFF2920	0.87	-1.7
2,989,495	+		GFF2920	0.87	-1.8
2,989,499	-		GFF2920	0.87	+0.8
2,989,510	+		GFF2920	0.87	-0.5
2,989,510	+		GFF2920	0.87	+0.9
2,989,510	+		GFF2920	0.87	+0.8
2,989,516	-		GFF2920	0.88	-1.0
2,989,518	-		GFF2920	0.88	+0.3
2,989,530	+		GFF2920	0.88	+0.2
2,989,530	+		GFF2920	0.88	-2.0
2,989,530	+		GFF2920	0.88	+0.5
2,989,530	+		GFF2920	0.88	+1.1
2,989,530	+		GFF2920	0.88	+1.0
2,989,530	+		GFF2920	0.88	-0.3
2,989,530	+		GFF2920	0.88	-0.9
2,989,538	-		GFF2920	0.89	-1.3
2,989,538	-		GFF2920	0.89	-0.3
2,989,538	-		GFF2920	0.89	+0.3
2,989,538	-		GFF2920	0.89	-0.9
2,989,538	-		GFF2920	0.89	+0.7
2,989,538	-		GFF2920	0.89	-1.1
2,989,538	-		GFF2920	0.89	+0.7
2,989,553	-		GFF2920	0.89	-1.7
2,989,559	+		GFF2920	0.89	-1.0
2,989,564	+		GFF2920	0.90	-1.1
2,989,564	+		GFF2920	0.90	-0.5
2,989,564	+		GFF2920	0.90	-2.1
2,989,564	+		GFF2920	0.90	+0.9
2,989,564	+		GFF2920	0.90	-0.2
2,989,564	+		GFF2920	0.90	+0.9
2,989,564	+		GFF2920	0.90	+0.4
2,989,564	+		GFF2920	0.90	-0.2
2,989,564	+		GFF2920	0.90	-2.4
2,989,564	+		GFF2920	0.90	+0.2
2,989,564	+		GFF2920	0.90	-0.7
2,989,564	+		GFF2920	0.90	+0.7
2,989,564	+		GFF2920	0.90	+0.0
2,989,572	-				-1.1
2,989,572	-				+0.4
2,989,572	-				-1.7
2,989,572	-				+0.2
2,989,572	-				-0.9
2,989,572	-				-0.7
2,989,572	-				-0.3
2,989,572	-				+0.3
2,989,572	-				+1.2
2,989,577	-				+0.7
2,989,577	-				-0.8
2,989,600	+				+0.4
2,989,600	+				+0.0
2,989,608	-				+0.1
2,989,608	-				+0.3
2,989,608	-				-1.6
2,989,650	+				+0.9
2,989,664	+				+1.1
2,989,684	-				+0.4
2,989,686	-				+0.1
2,989,687	+				-0.3
2,989,695	-				+0.0
2,989,695	-				-0.5
2,989,696	+				-0.2
2,989,700	-				+1.0
2,989,700	-				-0.5
2,989,713	-				-1.7
2,989,748	-				+0.4
2,989,861	+				+0.2
2,989,861	+				-0.5
2,989,861	+				-0.6
2,989,901	-				-0.3
2,989,902	-				-1.7
2,989,957	-				-0.3
2,989,980	+				-0.7
2,989,988	-				+0.1
2,989,990	+				+0.7
2,990,002	+				+0.1
2,990,003	+				+0.3
2,990,067	+				-1.6
2,990,070	-				-0.1
2,990,103	-				+0.7
2,990,105	+				-0.6
2,990,105	+				+1.2
2,990,105	+				+0.4
2,990,105	+				-2.4
2,990,105	+				-1.0
2,990,105	+				-1.0
2,990,105	+				+0.6
2,990,105	+				+0.9
2,990,105	+				-0.9
2,990,105	+				-1.2
2,990,105	+				-0.4
2,990,105	+				-0.7
2,990,105	+				-0.6
2,990,110	+				-2.6
2,990,113	-				-1.0
2,990,113	-				-0.3
2,990,113	-				-2.1
2,990,113	-				-1.5
2,990,113	-				-0.4
2,990,113	-				+0.8
2,990,113	-				-1.5
2,990,187	-		GFF2921	0.11	-0.7
2,990,217	+		GFF2921	0.12	-1.2
2,990,217	+		GFF2921	0.12	+1.7
2,990,222	+		GFF2921	0.12	+1.5
2,990,227	+		GFF2921	0.12	+0.7
2,990,235	-		GFF2921	0.13	-2.1
2,990,236	-		GFF2921	0.13	-0.2
2,990,236	-		GFF2921	0.13	+0.3
2,990,241	-		GFF2921	0.13	-0.6
2,990,255	+		GFF2921	0.13	+0.7
2,990,267	-		GFF2921	0.14	+0.0
2,990,281	+		GFF2921	0.14	+0.8
2,990,281	+		GFF2921	0.14	+0.7
2,990,281	+		GFF2921	0.14	+0.5
2,990,287	+		GFF2921	0.15	+0.3
2,990,295	-		GFF2921	0.15	-0.4
2,990,295	-		GFF2921	0.15	-0.3
2,990,295	-		GFF2921	0.15	-1.3
2,990,310	-		GFF2921	0.16	+0.2
2,990,351	+		GFF2921	0.17	-0.3
2,990,364	-		GFF2921	0.18	-1.1
2,990,408	+		GFF2921	0.20	-0.9
2,990,416	-		GFF2921	0.20	-0.3
2,990,416	-		GFF2921	0.20	-0.2
2,990,418	+		GFF2921	0.20	-0.2
2,990,418	+		GFF2921	0.20	-0.8
2,990,418	+		GFF2921	0.20	-0.1
2,990,418	+		GFF2921	0.20	+1.3
2,990,418	+		GFF2921	0.20	-1.3
2,990,418	+		GFF2921	0.20	-0.9
2,990,418	+		GFF2921	0.20	-0.3
2,990,426	-		GFF2921	0.20	+0.1
2,990,426	-		GFF2921	0.20	-0.7
2,990,426	-		GFF2921	0.20	-1.8
2,990,439	+		GFF2921	0.21	-2.2
2,990,444	+		GFF2921	0.21	+1.1
2,990,451	+		GFF2921	0.21	+1.2
2,990,461	-		GFF2921	0.22	+1.0
2,990,461	-		GFF2921	0.22	-2.1
2,990,461	-		GFF2921	0.22	-0.4
2,990,469	-		GFF2921	0.22	-1.2
2,990,469	-		GFF2921	0.22	-1.5
2,990,475	+		GFF2921	0.22	-0.1
2,990,487	+		GFF2921	0.23	+0.0
2,990,492	+		GFF2921	0.23	-0.2
2,990,507	-		GFF2921	0.24	-0.7
2,990,507	-		GFF2921	0.24	-0.4
2,990,514	+		GFF2921	0.24	-0.7
2,990,527	-		GFF2921	0.24	-0.5
2,990,535	-		GFF2921	0.25	-0.5
2,990,536	-		GFF2921	0.25	-1.0
2,990,536	-		GFF2921	0.25	-0.8
2,990,537	+		GFF2921	0.25	+0.9
2,990,560	+		GFF2921	0.26	-1.8
2,990,560	+		GFF2921	0.26	+0.2
2,990,568	-		GFF2921	0.26	+0.8
2,990,581	+		GFF2921	0.27	-1.5
2,990,584	-		GFF2921	0.27	+0.7
2,990,587	+		GFF2921	0.27	+0.1
2,990,587	+		GFF2921	0.27	-0.9
2,990,587	+		GFF2921	0.27	+0.7
2,990,587	+		GFF2921	0.27	-3.5
2,990,587	+		GFF2921	0.27	-1.3
2,990,587	+		GFF2921	0.27	+1.0
2,990,587	+		GFF2921	0.27	+1.2
2,990,587	+		GFF2921	0.27	-0.0
2,990,587	+		GFF2921	0.27	-0.7
2,990,587	+		GFF2921	0.27	+1.5
2,990,587	+		GFF2921	0.27	+0.4
2,990,595	-		GFF2921	0.27	+0.7
2,990,595	-		GFF2921	0.27	-0.9
2,990,595	-		GFF2921	0.27	-1.6
2,990,595	-		GFF2921	0.27	+1.0
2,990,595	-		GFF2921	0.27	-0.8
2,990,595	-		GFF2921	0.27	+0.3
2,990,595	-		GFF2921	0.27	-0.0
2,990,595	-		GFF2921	0.27	+0.1
2,990,595	-		GFF2921	0.27	-0.2
2,990,595	-		GFF2921	0.27	-1.2
2,990,595	-		GFF2921	0.27	-0.0
2,990,595	-		GFF2921	0.27	+0.9
2,990,610	-		GFF2921	0.28	-0.7
2,990,610	-		GFF2921	0.28	+1.4
2,990,618	-		GFF2921	0.28	+0.4
2,990,618	-		GFF2921	0.28	-0.1
2,990,643	-		GFF2921	0.29	-0.5
2,990,643	-		GFF2921	0.29	+1.4
2,990,643	-		GFF2921	0.29	+0.5
2,990,698	+		GFF2921	0.31	+0.7
2,990,706	-		GFF2921	0.32	-1.6
2,990,733	-		GFF2921	0.33	-1.3
2,990,750	+		GFF2921	0.33	-0.6
2,990,750	+		GFF2921	0.33	-1.0
2,990,750	+		GFF2921	0.33	+0.2
2,990,754	-		GFF2921	0.34	-1.2
2,990,758	-		GFF2921	0.34	-0.1
2,990,758	-		GFF2921	0.34	-0.6
2,990,758	-		GFF2921	0.34	-2.0
2,990,766	-		GFF2921	0.34	-1.2
2,990,776	-		GFF2921	0.35	-0.1
2,990,784	+		GFF2921	0.35	-0.7
2,990,785	-		GFF2921	0.35	-0.9
2,990,802	-		GFF2921	0.36	+0.2
2,990,804	+		GFF2921	0.36	-0.1
2,990,804	+		GFF2921	0.36	-0.0
2,990,804	+		GFF2921	0.36	+0.0
2,990,804	+		GFF2921	0.36	+0.7
2,990,804	+		GFF2921	0.36	+0.0
2,990,812	-		GFF2921	0.36	-1.9
2,990,812	-		GFF2921	0.36	-2.0
2,990,831	+		GFF2921	0.37	-1.0
2,990,836	+		GFF2921	0.37	+0.4
2,990,836	+		GFF2921	0.37	-1.0
2,990,844	+		GFF2921	0.37	+0.5
2,990,844	-		GFF2921	0.37	-0.6
2,990,862	-		GFF2921	0.38	+0.7
2,990,871	+		GFF2921	0.38	+0.9
2,990,879	-		GFF2921	0.39	+0.1
2,990,900	+		GFF2921	0.40	+0.0
2,990,902	+		GFF2921	0.40	+0.1
2,990,902	+		GFF2921	0.40	-0.3
2,990,902	+		GFF2921	0.40	+0.9
2,990,902	+		GFF2921	0.40	-0.1
2,990,902	+		GFF2921	0.40	-0.1
2,990,902	+		GFF2921	0.40	+0.5
2,990,902	+		GFF2921	0.40	-0.2
2,990,902	+		GFF2921	0.40	-1.0
2,990,908	-		GFF2921	0.40	-0.7
2,990,910	-		GFF2921	0.40	-1.7
2,990,910	-		GFF2921	0.40	-0.3
2,990,910	-		GFF2921	0.40	+0.1
2,990,910	-		GFF2921	0.40	-0.0
2,990,910	-		GFF2921	0.40	+1.3
2,990,910	-		GFF2921	0.40	-1.0
2,990,910	-		GFF2921	0.40	+0.1
2,990,910	-		GFF2921	0.40	-0.2
2,990,910	-		GFF2921	0.40	+0.3
2,990,923	+		GFF2921	0.41	+0.7
2,990,931	-		GFF2921	0.41	-0.3
2,990,936	-		GFF2921	0.41	-1.1
2,990,962	-		GFF2921	0.42	+0.2
2,990,977	+		GFF2921	0.43	+1.1
2,990,977	+		GFF2921	0.43	-0.3
2,990,985	-		GFF2921	0.43	-0.5
2,990,985	-		GFF2921	0.43	+1.2
2,990,988	+		GFF2921	0.43	-0.9
2,990,996	+		GFF2921	0.44	-0.2
2,991,023	+		GFF2921	0.45	+0.4
2,991,031	-		GFF2921	0.45	-0.5
2,991,031	-		GFF2921	0.45	+1.6
2,991,031	-		GFF2921	0.45	-1.8
2,991,044	-		GFF2921	0.45	+0.2
2,991,055	+		GFF2921	0.46	-1.1
2,991,055	+		GFF2921	0.46	-2.0
2,991,055	+		GFF2921	0.46	-0.9
2,991,059	+		GFF2921	0.46	-0.7
2,991,059	+		GFF2921	0.46	-1.1
2,991,063	-		GFF2921	0.46	-0.8
2,991,063	-		GFF2921	0.46	-1.8
2,991,063	-		GFF2921	0.46	+0.9
2,991,067	-		GFF2921	0.46	-0.5
2,991,088	+		GFF2921	0.47	-3.0
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2,991,106	+		GFF2921	0.48	+1.1
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2,991,106	+		GFF2921	0.48	-1.8
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2,991,114	-		GFF2921	0.48	+1.3
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2,991,179	-		GFF2921	0.51	-1.7
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2,991,186	-		GFF2921	0.51	-1.5
2,991,186	-		GFF2921	0.51	-0.3
2,991,188	+		GFF2921	0.51	+0.3
2,991,188	+		GFF2921	0.51	+0.3
2,991,188	+		GFF2921	0.51	-1.7
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2,991,191	-		GFF2921	0.51	-0.6
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2,991,201	-		GFF2921	0.52	-2.0
2,991,201	-		GFF2921	0.52	-0.3
2,991,201	-		GFF2921	0.52	-0.3
2,991,203	+		GFF2921	0.52	-1.7
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2,991,203	+		GFF2921	0.52	-1.3
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2,991,203	+		GFF2921	0.52	-1.0
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2,991,211	-		GFF2921	0.52	-1.0
2,991,211	-		GFF2921	0.52	-0.3
2,991,211	-		GFF2921	0.52	-0.9
2,991,211	-		GFF2921	0.52	+0.9
2,991,211	-		GFF2921	0.52	-0.6
2,991,211	-		GFF2921	0.52	-1.3
2,991,211	-		GFF2921	0.52	-0.4
2,991,211	-		GFF2921	0.52	+0.6
2,991,211	-		GFF2921	0.52	-0.5
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2,991,211	-		GFF2921	0.52	-1.6
2,991,211	-		GFF2921	0.52	+0.7
2,991,211	-		GFF2921	0.52	-0.8
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2,991,211	-		GFF2921	0.52	+0.7
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2,991,211	-		GFF2921	0.52	-0.2
2,991,213	+		GFF2921	0.52	-0.6
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2,991,291	+		GFF2921	0.56	+0.2
2,991,291	+		GFF2921	0.56	-1.3
2,991,291	+		GFF2921	0.56	-1.2
2,991,291	+		GFF2921	0.56	-3.1
2,991,291	+		GFF2921	0.56	-1.9
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2,991,291	+		GFF2921	0.56	-1.4
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2,991,299	-		GFF2921	0.56	-0.7
2,991,299	-		GFF2921	0.56	-0.3
2,991,299	-		GFF2921	0.56	+0.2
2,991,299	-		GFF2921	0.56	+0.5
2,991,299	-		GFF2921	0.56	-1.5
2,991,299	-		GFF2921	0.56	-0.8
2,991,299	-		GFF2921	0.56	-1.2
2,991,299	-		GFF2921	0.56	+0.9
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2,991,299	-		GFF2921	0.56	-0.7
2,991,299	-		GFF2921	0.56	-1.7
2,991,304	-		GFF2921	0.56	+1.4
2,991,312	+		GFF2921	0.56	+0.1
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2,991,320	-		GFF2921	0.57	-1.1
2,991,320	-		GFF2921	0.57	-0.0
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2,991,344	+		GFF2921	0.58	+1.5
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2,991,350	-		GFF2921	0.58	+0.0
2,991,350	-		GFF2921	0.58	-1.4
2,991,350	-		GFF2921	0.58	+0.8
2,991,365	-		GFF2921	0.59	-1.2
2,991,383	+		GFF2921	0.59	+0.6
2,991,410	+		GFF2921	0.60	-0.2
2,991,414	-		GFF2921	0.61	-0.3
2,991,422	-		GFF2921	0.61	-0.2
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2,991,455	+		GFF2921	0.62	-1.5
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2,991,455	+		GFF2921	0.62	-1.4
2,991,455	+		GFF2921	0.62	+1.0
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2,991,455	+		GFF2921	0.62	-0.9
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2,991,463	-		GFF2921	0.63	+0.1
2,991,463	-		GFF2921	0.63	+0.7
2,991,463	-		GFF2921	0.63	+0.2
2,991,463	-		GFF2921	0.63	-0.1
2,991,463	-		GFF2921	0.63	+1.7
2,991,465	+		GFF2921	0.63	+0.7
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2,991,496	-		GFF2921	0.64	-2.2
2,991,496	-		GFF2921	0.64	-0.5
2,991,503	-		GFF2921	0.64	+1.0
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2,991,599	+		GFF2921	0.68	+0.6
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2,991,635	+		GFF2921	0.70	+0.3
2,991,645	+		GFF2921	0.70	-0.3
2,991,645	+		GFF2921	0.70	+1.7
2,991,653	-		GFF2921	0.70	-1.5
2,991,653	-		GFF2921	0.70	-0.8
2,991,694	+		GFF2921	0.72	-0.3
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2,991,704	+		GFF2921	0.72	-1.3
2,991,704	+		GFF2921	0.72	-0.8
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2,991,712	-		GFF2921	0.73	-0.1
2,991,712	-		GFF2921	0.73	-0.5
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2,991,712	-		GFF2921	0.73	-0.1
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2,991,785	+		GFF2921	0.76	-1.6
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2,992,162	+				+0.0
2,992,173	+				+0.4
2,992,188	+				+0.7
2,992,188	+				-0.5
2,992,197	-				-1.9
2,992,206	+				+0.4
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2,992,286	-				-2.3
2,992,286	-				-0.6
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2,992,320	+				+1.3
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2,992,328	-				+0.1
2,992,343	-				-0.6
2,992,343	-				-1.8
2,992,348	-				-0.9
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2,992,362	-				-0.5
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2,992,377	-				-1.5
2,992,377	-				+0.9
2,992,377	-				+0.7
2,992,377	-				-0.1
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