Strain Fitness in Sphingobium sp. HT1-2 around GFF2883

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,943,023	+		GFF2882	0.54	-0.3
2,943,041	+		GFF2882	0.54	+0.5
2,943,041	+		GFF2882	0.54	-1.3
2,943,046	+		GFF2882	0.55	+1.1
2,943,046	+		GFF2882	0.55	+0.0
2,943,049	-		GFF2882	0.55	+0.3
2,943,054	-		GFF2882	0.55	-0.9
2,943,059	-		GFF2882	0.55	-1.6
2,943,111	+		GFF2882	0.58	-0.1
2,943,111	+		GFF2882	0.58	+0.0
2,943,119	-		GFF2882	0.58	+0.2
2,943,119	-		GFF2882	0.58	+0.5
2,943,121	+		GFF2882	0.58	-0.4
2,943,121	+		GFF2882	0.58	+0.1
2,943,121	+		GFF2882	0.58	-0.2
2,943,142	+		GFF2882	0.59	-0.7
2,943,144	-		GFF2882	0.59	+0.3
2,943,145	-		GFF2882	0.59	-1.3
2,943,146	+		GFF2882	0.59	+0.8
2,943,206	-		GFF2882	0.62	-0.6
2,943,259	-		GFF2882	0.65	+1.0
2,943,262	+		GFF2882	0.65	-1.8
2,943,302	+		GFF2882	0.67	-0.9
2,943,307	+		GFF2882	0.67	+0.9
2,943,307	+		GFF2882	0.67	-0.7
2,943,315	-		GFF2882	0.67	-0.6
2,943,315	-		GFF2882	0.67	-0.7
2,943,318	+		GFF2882	0.68	-2.1
2,943,326	-		GFF2882	0.68	+0.2
2,943,345	-		GFF2882	0.69	-0.9
2,943,353	-		GFF2882	0.69	-2.0
2,943,363	+		GFF2882	0.70	-1.2
2,943,380	-		GFF2882	0.71	-0.6
2,943,397	-		GFF2882	0.71	+1.0
2,943,441	+		GFF2882	0.73	+1.2
2,943,449	-		GFF2882	0.74	-1.7
2,943,449	-		GFF2882	0.74	+0.6
2,943,497	-		GFF2882	0.76	-1.9
2,943,497	-		GFF2882	0.76	+0.8
2,943,497	-		GFF2882	0.76	-0.3
2,943,497	-		GFF2882	0.76	+0.1
2,943,497	-		GFF2882	0.76	-1.1
2,943,509	+		GFF2882	0.77	+1.6
2,943,512	-		GFF2882	0.77	-0.3
2,943,524	+		GFF2882	0.77	-1.2
2,943,527	-		GFF2882	0.78	-1.0
2,943,532	-		GFF2882	0.78	-0.7
2,943,537	+		GFF2882	0.78	-0.6
2,943,538	+		GFF2882	0.78	-1.2
2,943,555	+		GFF2882	0.79	+0.8
2,943,555	+		GFF2882	0.79	-0.2
2,943,555	+		GFF2882	0.79	+0.3
2,943,560	+		GFF2882	0.79	-0.4
2,943,560	+		GFF2882	0.79	-0.6
2,943,560	+		GFF2882	0.79	-1.3
2,943,563	-		GFF2882	0.79	-0.9
2,943,563	-		GFF2882	0.79	+1.2
2,943,568	-		GFF2882	0.80	+0.4
2,943,576	+		GFF2882	0.80	-1.1
2,943,576	+		GFF2882	0.80	-0.6
2,943,584	-		GFF2882	0.80	-0.1
2,943,584	-		GFF2882	0.80	-1.8
2,943,586	+		GFF2882	0.80	+0.1
2,943,594	+		GFF2882	0.81	+0.5
2,943,594	-		GFF2882	0.81	-1.4
2,943,602	+		GFF2882	0.81	-0.2
2,943,606	+		GFF2882	0.81	+0.2
2,943,607	+		GFF2882	0.81	-0.1
2,943,610	-		GFF2882	0.82	+0.3
2,943,621	+		GFF2882	0.82	+0.2
2,943,645	+		GFF2882	0.83	+0.2
2,943,645	+		GFF2882	0.83	-1.5
2,943,645	+		GFF2882	0.83	+0.7
2,943,653	-		GFF2882	0.84	+0.7
2,943,653	-		GFF2882	0.84	-1.3
2,943,653	-		GFF2882	0.84	+0.3
2,943,653	-		GFF2882	0.84	-0.4
2,943,653	-		GFF2882	0.84	+0.4
2,943,653	-		GFF2882	0.84	-0.5
2,943,662	+		GFF2882	0.84	+0.0
2,943,674	-		GFF2882	0.85	-0.6
2,943,675	-		GFF2882	0.85	-1.8
2,943,675	-		GFF2882	0.85	+0.3
2,943,681	+		GFF2882	0.85	-0.3
2,943,702	+		GFF2882	0.86	-0.5
2,943,720	+		GFF2882	0.87	-1.3
2,943,720	+		GFF2882	0.87	-0.2
2,943,720	+		GFF2882	0.87	-0.4
2,943,780	+		GFF2882	0.90	-0.6
2,943,780	+		GFF2882	0.90	-0.3
2,943,780	+		GFF2882	0.90	-0.4
2,943,780	+		GFF2882	0.90	-0.8
2,943,780	+		GFF2882	0.90	-0.6
2,943,785	+		GFF2882	0.90	-0.3
2,943,788	-				+0.7
2,943,788	-				+1.2
2,943,788	-				+0.4
2,943,788	-				-1.2
2,943,788	-				-0.7
2,943,788	-				-0.1
2,943,788	-				-0.9
2,943,790	+				-0.5
2,943,793	-				-1.9
2,943,812	+				+0.4
2,943,820	-				-1.2
2,943,827	+				+0.3
2,943,830	-				+0.2
2,943,832	+				+0.2
2,943,832	+				-0.2
2,943,832	+				+1.0
2,943,835	-				+0.2
2,943,840	-				-0.8
2,943,840	-				-1.1
2,943,840	-				+0.1
2,943,845	-				+0.4
2,943,853	+				+0.4
2,943,853	-				-0.8
2,943,861	+				-1.5
2,943,861	-				-0.4
2,943,869	-				-1.9
2,943,873	-				+0.7
2,943,882	+				+0.2
2,943,882	+				-0.9
2,943,882	+				-0.9
2,943,882	+				+0.1
2,943,882	+				-0.3
2,943,882	+				+0.8
2,943,889	-				-0.0
2,943,890	-				+0.9
2,943,890	-				-1.3
2,943,890	-				+0.2
2,943,890	-				+1.4
2,943,890	-				-0.4
2,943,913	-				-0.5
2,943,928	+				+0.1
2,943,933	+				-1.1
2,943,933	+				-0.6
2,943,985	-				-0.1
2,943,985	-				-0.0
2,943,997	+				-0.2
2,944,001	+				-0.3
2,944,025	-				+1.0
2,944,033	+				+0.8
2,944,033	+				-0.1
2,944,034	+				-1.4
2,944,040	+				+0.7
2,944,042	-				-1.5
2,944,055	+				+0.8
2,944,063	-				-2.7
2,944,063	-				-0.6
2,944,063	-				-0.8
2,944,065	+				+0.4
2,944,073	-				-0.6
2,944,073	-				-0.2
2,944,096	-				-1.7
2,944,100	+				+0.7
2,944,110	+				-0.3
2,944,117	+		GFF2883	0.11	-0.8
2,944,117	+		GFF2883	0.11	+0.3
2,944,120	-		GFF2883	0.11	+0.1
2,944,125	+		GFF2883	0.11	-1.5
2,944,142	+		GFF2883	0.13	+0.5
2,944,160	+		GFF2883	0.14	-1.7
2,944,168	-		GFF2883	0.15	-2.1
2,944,169	+		GFF2883	0.15	-0.7
2,944,169	+		GFF2883	0.15	+0.2
2,944,181	-		GFF2883	0.16	+0.7
2,944,205	+		GFF2883	0.18	-0.2
2,944,241	-		GFF2883	0.21	-1.6
2,944,278	+		GFF2883	0.24	-1.0
2,944,278	+		GFF2883	0.24	-1.7
2,944,283	+		GFF2883	0.25	+0.4
2,944,283	+		GFF2883	0.25	+0.3
2,944,285	-		GFF2883	0.25	-0.3
2,944,291	-		GFF2883	0.26	-0.3
2,944,300	+		GFF2883	0.26	-1.7
2,944,300	+		GFF2883	0.26	-0.2
2,944,312	-		GFF2883	0.27	+0.6
2,944,312	-		GFF2883	0.27	-0.4
2,944,321	-		GFF2883	0.28	-0.1
2,944,330	+		GFF2883	0.29	-0.6
2,944,330	+		GFF2883	0.29	-0.1
2,944,337	+		GFF2883	0.29	-0.2
2,944,337	+		GFF2883	0.29	-0.3
2,944,337	+		GFF2883	0.29	-2.3
2,944,342	+		GFF2883	0.30	-0.6
2,944,342	+		GFF2883	0.30	-1.4
2,944,342	+		GFF2883	0.30	-0.2
2,944,345	-		GFF2883	0.30	+1.3
2,944,350	-		GFF2883	0.31	+0.7
2,944,350	-		GFF2883	0.31	-1.2
2,944,365	-		GFF2883	0.32	-0.2
2,944,373	+		GFF2883	0.33	-0.3
2,944,381	-		GFF2883	0.33	+0.7
2,944,381	-		GFF2883	0.33	+0.9
2,944,383	+		GFF2883	0.33	-0.4
2,944,383	+		GFF2883	0.33	-0.5
2,944,388	+		GFF2883	0.34	+0.1
2,944,391	-		GFF2883	0.34	-1.1
2,944,391	-		GFF2883	0.34	+0.0
2,944,391	-		GFF2883	0.34	+0.0
2,944,393	+		GFF2883	0.34	-1.2
2,944,396	-		GFF2883	0.35	-2.3
2,944,396	-		GFF2883	0.35	-2.3
2,944,411	-		GFF2883	0.36	-1.7
2,944,417	+		GFF2883	0.36	-0.3
2,944,425	-		GFF2883	0.37	-2.0
2,944,434	+		GFF2883	0.38	-1.3
2,944,435	-		GFF2883	0.38	-2.3
2,944,440	-		GFF2883	0.38	-0.2
2,944,451	-		GFF2883	0.39	-1.4
2,944,466	-		GFF2883	0.41	-1.8
2,944,466	-		GFF2883	0.41	+0.4
2,944,471	-		GFF2883	0.41	-0.6
2,944,471	-		GFF2883	0.41	-0.6
2,944,477	+		GFF2883	0.41	-1.3
2,944,509	+		GFF2883	0.44	-0.1
2,944,518	+		GFF2883	0.45	-0.5
2,944,521	-		GFF2883	0.45	+1.6
2,944,526	+		GFF2883	0.46	+1.1
2,944,526	-		GFF2883	0.46	+0.9
2,944,526	-		GFF2883	0.46	-0.3
2,944,534	-		GFF2883	0.46	-1.2
2,944,534	-		GFF2883	0.46	-1.7
2,944,535	-		GFF2883	0.46	+1.1
2,944,540	-		GFF2883	0.47	+1.0
2,944,540	-		GFF2883	0.47	-0.7
2,944,540	-		GFF2883	0.47	-1.2
2,944,579	+		GFF2883	0.50	-0.8
2,944,594	-		GFF2883	0.52	-0.7
2,944,603	-		GFF2883	0.52	+0.2
2,944,686	-		GFF2883	0.59	+0.5
2,944,698	+		GFF2883	0.60	+0.5
2,944,702	+		GFF2883	0.61	+0.7
2,944,726	-		GFF2883	0.63	+0.2
2,944,728	-		GFF2883	0.63	-0.5
2,944,747	+		GFF2883	0.65	+0.1
2,944,755	-		GFF2883	0.65	-0.5
2,944,759	-		GFF2883	0.66	-1.5
2,944,783	-		GFF2883	0.68	-1.0
2,944,793	+		GFF2883	0.69	-1.0
2,944,815	+		GFF2883	0.71	+1.5
2,944,818	-		GFF2883	0.71	-1.2
2,944,818	-		GFF2883	0.71	-1.5
2,944,820	+		GFF2883	0.71	-1.7
2,944,823	-		GFF2883	0.71	+0.2
2,944,834	+		GFF2883	0.72	+0.8
2,944,845	+		GFF2883	0.73	+0.2
2,944,845	+		GFF2883	0.73	-0.2
2,944,853	+		GFF2883	0.74	-0.2
2,944,853	-		GFF2883	0.74	+0.4
2,944,853	-		GFF2883	0.74	-2.0
2,944,855	+		GFF2883	0.74	+0.0
2,944,887	+		GFF2883	0.77	+1.2
2,944,892	+		GFF2883	0.77	-0.4
2,944,892	+		GFF2883	0.77	-2.5
2,944,892	+		GFF2883	0.77	-0.5
2,944,892	+		GFF2883	0.77	-0.6
2,944,892	+		GFF2883	0.77	-1.9
2,944,892	+		GFF2883	0.77	+0.3
2,944,892	+		GFF2883	0.77	-1.7
2,944,892	+		GFF2883	0.77	-1.0
2,944,892	+		GFF2883	0.77	-1.4
2,944,892	+		GFF2883	0.77	-0.2
2,944,892	+		GFF2883	0.77	-0.5
2,944,892	+		GFF2883	0.77	-1.5
2,944,892	+		GFF2883	0.77	-1.4
2,944,895	-		GFF2883	0.77	-0.5
2,944,895	-		GFF2883	0.77	+1.5
2,944,900	-		GFF2883	0.78	+0.3
2,944,900	-		GFF2883	0.78	+0.0
2,944,900	-		GFF2883	0.78	+0.4
2,944,900	-		GFF2883	0.78	+0.2
2,944,900	-		GFF2883	0.78	+0.5
2,944,900	-		GFF2883	0.78	-1.0
2,944,900	-		GFF2883	0.78	-0.2
2,944,900	-		GFF2883	0.78	+0.0
2,944,900	-		GFF2883	0.78	+0.8
2,944,900	-		GFF2883	0.78	+0.7
2,944,900	-		GFF2883	0.78	-1.7
2,944,900	-		GFF2883	0.78	-0.7
2,944,918	+		GFF2883	0.79	-0.6
2,944,921	-		GFF2883	0.80	-1.6
2,944,921	-		GFF2883	0.80	-0.9
2,944,921	-		GFF2883	0.80	+1.0
2,944,921	-		GFF2883	0.80	-1.3
2,944,923	+		GFF2883	0.80	-1.2
2,944,964	+		GFF2883	0.83	+0.2
2,944,972	-		GFF2883	0.84	+1.5
2,944,972	-		GFF2883	0.84	+1.0
2,944,986	+		GFF2883	0.85	-0.5
2,945,007	-		GFF2883	0.87	+0.4
2,945,014	+		GFF2883	0.88	-1.5
2,945,015	+		GFF2883	0.88	+1.2
2,945,016	+		GFF2883	0.88	+0.4
2,945,022	-		GFF2883	0.88	-1.6
2,945,022	-		GFF2883	0.88	+0.7
2,945,028	+		GFF2883	0.89	+0.5
2,945,038	+		GFF2883	0.90	-1.6
2,945,073	-				+0.9
2,945,104	-				+1.1
2,945,127	+				+0.1
2,945,160	+				-0.4
2,945,180	-				-1.8
2,945,242	+				-0.1
2,945,249	-		GFF2884	0.11	-0.3
2,945,259	-		GFF2884	0.12	-0.8
2,945,259	-		GFF2884	0.12	-0.6
2,945,265	+		GFF2884	0.12	-0.1
2,945,273	-		GFF2884	0.13	-1.0
2,945,283	-		GFF2884	0.14	-0.4
2,945,372	-		GFF2884	0.24	-1.5
2,945,409	-		GFF2884	0.29	+0.1
2,945,412	-		GFF2884	0.29	-0.0
2,945,418	+		GFF2884	0.30	+0.6
2,945,418	+		GFF2884	0.30	-0.5
2,945,420	+		GFF2884	0.30	-2.0
2,945,426	-		GFF2884	0.30	+0.6
2,945,426	-		GFF2884	0.30	+1.1
2,945,499	+		GFF2884	0.39	-2.0
2,945,504	+		GFF2884	0.39	+0.2
2,945,579	+		GFF2884	0.48	-1.3
2,945,613	-		GFF2884	0.51	+0.4
2,945,615	+		GFF2884	0.52	+0.7
2,945,615	+		GFF2884	0.52	+0.8
2,945,615	+		GFF2884	0.52	-0.6
2,945,615	+		GFF2884	0.52	-1.0
2,945,615	+		GFF2884	0.52	-0.3
2,945,615	+		GFF2884	0.52	-0.3
2,945,615	+		GFF2884	0.52	-0.4
2,945,617	-		GFF2884	0.52	-1.1
2,945,636	+		GFF2884	0.54	-0.6
2,945,647	+		GFF2884	0.55	-0.2
2,945,647	+		GFF2884	0.55	+0.4
2,945,647	+		GFF2884	0.55	+1.3
2,945,647	+		GFF2884	0.55	+1.4
2,945,647	+		GFF2884	0.55	-0.7
2,945,650	-		GFF2884	0.55	+0.3
2,945,650	-		GFF2884	0.55	+0.2
2,945,655	-		GFF2884	0.56	+0.7
2,945,655	-		GFF2884	0.56	+0.2
2,945,655	-		GFF2884	0.56	+0.9
2,945,655	-		GFF2884	0.56	+1.9
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