Strain Fitness in Sphingobium sp. HT1-2 around GFF2765

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,796,467	+		GFF2764	0.25	-0.4
2,796,468	+		GFF2764	0.25	-0.4
2,796,475	-		GFF2764	0.26	-0.0
2,796,480	-		GFF2764	0.26	-0.5
2,796,509	+		GFF2764	0.29	+1.2
2,796,509	+		GFF2764	0.29	-0.2
2,796,520	+		GFF2764	0.29	-1.2
2,796,526	-		GFF2764	0.30	-0.0
2,796,528	-		GFF2764	0.30	-0.1
2,796,538	-		GFF2764	0.31	+0.1
2,796,538	-		GFF2764	0.31	-1.0
2,796,558	+		GFF2764	0.32	-0.9
2,796,558	+		GFF2764	0.32	+0.8
2,796,558	+		GFF2764	0.32	-0.4
2,796,561	+		GFF2764	0.32	+0.6
2,796,566	-		GFF2764	0.33	+1.0
2,796,571	+		GFF2764	0.33	+0.4
2,796,571	+		GFF2764	0.33	-2.4
2,796,577	-		GFF2764	0.34	-0.9
2,796,577	-		GFF2764	0.34	-0.8
2,796,579	-		GFF2764	0.34	+0.9
2,796,579	-		GFF2764	0.34	+0.4
2,796,602	+		GFF2764	0.36	-0.3
2,796,607	+		GFF2764	0.36	+1.2
2,796,607	+		GFF2764	0.36	-2.1
2,796,607	+		GFF2764	0.36	-1.2
2,796,610	-		GFF2764	0.36	-1.4
2,796,611	-		GFF2764	0.36	+0.3
2,796,611	-		GFF2764	0.36	+0.2
2,796,611	-		GFF2764	0.36	-1.8
2,796,615	-		GFF2764	0.37	+0.4
2,796,645	-		GFF2764	0.39	-0.0
2,796,683	+		GFF2764	0.42	-1.5
2,796,685	-		GFF2764	0.42	-0.8
2,796,691	+		GFF2764	0.42	-0.3
2,796,691	+		GFF2764	0.42	-0.6
2,796,707	-		GFF2764	0.44	+0.8
2,796,717	+		GFF2764	0.44	-0.1
2,796,752	+		GFF2764	0.47	-1.2
2,796,752	+		GFF2764	0.47	-0.9
2,796,759	+		GFF2764	0.48	-1.4
2,796,759	+		GFF2764	0.48	-0.9
2,796,759	+		GFF2764	0.48	-0.4
2,796,759	+		GFF2764	0.48	-0.9
2,796,759	-		GFF2764	0.48	+0.0
2,796,760	-		GFF2764	0.48	-0.4
2,796,767	-		GFF2764	0.48	+0.6
2,796,772	-		GFF2764	0.49	-0.4
2,796,779	-		GFF2764	0.49	+0.0
2,796,786	+		GFF2764	0.50	-0.7
2,796,786	+		GFF2764	0.50	+0.3
2,796,794	-		GFF2764	0.50	-0.9
2,796,802	-		GFF2764	0.51	-2.4
2,796,852	+		GFF2764	0.55	-0.5
2,796,852	+		GFF2764	0.55	-0.1
2,796,852	-		GFF2764	0.55	-0.5
2,796,860	-		GFF2764	0.55	-0.5
2,796,882	-		GFF2764	0.57	-0.7
2,796,884	-		GFF2764	0.57	-0.8
2,796,899	+		GFF2764	0.58	-0.9
2,796,902	-		GFF2764	0.58	-0.7
2,796,902	-		GFF2764	0.58	+0.5
2,796,907	-		GFF2764	0.59	+1.0
2,796,910	-		GFF2764	0.59	-0.6
2,796,911	+		GFF2764	0.59	-0.2
2,796,912	+		GFF2764	0.59	+0.6
2,796,916	+		GFF2764	0.60	-1.9
2,796,920	-		GFF2764	0.60	-1.0
2,796,920	-		GFF2764	0.60	+0.3
2,796,929	+		GFF2764	0.61	+1.7
2,796,942	+		GFF2764	0.61	+0.6
2,796,945	-		GFF2764	0.62	+0.2
2,796,959	+		GFF2764	0.63	+0.6
2,796,959	-		GFF2764	0.63	+0.9
2,796,960	-		GFF2764	0.63	-1.4
2,796,984	+		GFF2764	0.65	-0.1
2,796,994	+		GFF2764	0.65	-2.5
2,796,994	+		GFF2764	0.65	-0.4
2,796,997	-		GFF2764	0.66	+0.6
2,797,002	-		GFF2764	0.66	-0.7
2,797,002	-		GFF2764	0.66	+0.5
2,797,003	+		GFF2764	0.66	+0.7
2,797,011	-		GFF2764	0.67	-0.2
2,797,021	-		GFF2764	0.68	+0.4
2,797,032	+		GFF2764	0.68	+0.2
2,797,035	+		GFF2764	0.69	-0.9
2,797,035	+		GFF2764	0.69	-0.5
2,797,035	-		GFF2764	0.69	-0.7
2,797,076	+		GFF2764	0.72	+0.2
2,797,088	-		GFF2764	0.73	-0.9
2,797,096	+		GFF2764	0.73	+0.4
2,797,096	+		GFF2764	0.73	+0.1
2,797,096	+		GFF2764	0.73	-1.2
2,797,096	+		GFF2764	0.73	-1.4
2,797,096	+		GFF2764	0.73	+0.5
2,797,104	+		GFF2764	0.74	+0.4
2,797,104	+		GFF2764	0.74	-0.4
2,797,104	+		GFF2764	0.74	-0.7
2,797,104	+		GFF2764	0.74	-1.6
2,797,104	-		GFF2764	0.74	+0.8
2,797,104	-		GFF2764	0.74	+0.4
2,797,104	-		GFF2764	0.74	-0.5
2,797,109	+		GFF2764	0.74	-0.9
2,797,113	+		GFF2764	0.75	-2.2
2,797,122	+		GFF2764	0.75	+0.0
2,797,144	+		GFF2764	0.77	-1.5
2,797,175	+		GFF2764	0.79	+0.3
2,797,183	-		GFF2764	0.80	-0.4
2,797,217	+		GFF2764	0.82	-0.9
2,797,217	+		GFF2764	0.82	-0.7
2,797,217	+		GFF2764	0.82	-0.1
2,797,217	+		GFF2764	0.82	+0.2
2,797,217	+		GFF2764	0.82	+1.7
2,797,224	-		GFF2764	0.83	-0.5
2,797,225	-		GFF2764	0.83	+0.4
2,797,227	+		GFF2764	0.83	+0.3
2,797,274	+		GFF2764	0.87	-1.5
2,797,339	-				+0.7
2,797,346	+				+0.2
2,797,346	+				+0.2
2,797,346	+				+0.1
2,797,346	+				-0.8
2,797,351	+				-0.2
2,797,354	-				-1.4
2,797,354	-				-0.5
2,797,396	+				+0.1
2,797,412	+				-0.7
2,797,436	-				+0.3
2,797,442	+				-0.3
2,797,442	-				-0.5
2,797,446	-				+0.1
2,797,492	-				+1.3
2,797,496	+				-1.4
2,797,520	+				+0.7
2,797,528	-				-0.5
2,797,533	-				+0.2
2,797,533	-				-1.5
2,797,557	-				+0.4
2,797,562	+				-1.2
2,797,571	-				+0.9
2,797,586	+				+0.4
2,797,587	+				-2.3
2,797,594	-				-0.9
2,797,594	-				+0.2
2,797,597	+				-0.4
2,797,597	-				-1.9
2,797,605	-				-1.5
2,797,611	+				+0.1
2,797,632	+				-1.2
2,797,632	+				+0.0
2,797,640	-				-1.2
2,797,652	-		GFF2765	0.11	-1.1
2,797,661	-		GFF2765	0.11	-0.6
2,797,677	-		GFF2765	0.12	-0.9
2,797,677	-		GFF2765	0.12	+0.0
2,797,684	+		GFF2765	0.12	-0.4
2,797,718	+		GFF2765	0.14	+0.9
2,797,718	+		GFF2765	0.14	+0.2
2,797,718	+		GFF2765	0.14	-0.6
2,797,726	-		GFF2765	0.15	-1.4
2,797,726	-		GFF2765	0.15	-1.8
2,797,726	-		GFF2765	0.15	+1.4
2,797,726	-		GFF2765	0.15	-2.1
2,797,726	-		GFF2765	0.15	-3.2
2,797,749	+		GFF2765	0.16	-0.5
2,797,766	-		GFF2765	0.17	-0.5
2,797,824	-		GFF2765	0.20	+0.1
2,797,824	-		GFF2765	0.20	-0.7
2,797,824	-		GFF2765	0.20	-0.9
2,797,857	-		GFF2765	0.22	-1.7
2,797,857	-		GFF2765	0.22	-0.6
2,797,872	-		GFF2765	0.22	-0.2
2,797,893	+		GFF2765	0.23	-1.2
2,797,900	-		GFF2765	0.24	-0.5
2,797,904	+		GFF2765	0.24	-0.7
2,797,907	+		GFF2765	0.24	-0.2
2,797,915	-		GFF2765	0.25	+0.2
2,797,917	-		GFF2765	0.25	-0.4
2,797,928	+		GFF2765	0.25	-0.8
2,797,929	+		GFF2765	0.25	+0.7
2,797,929	+		GFF2765	0.25	+0.7
2,797,937	-		GFF2765	0.26	-0.2
2,797,937	-		GFF2765	0.26	+0.0
2,797,937	-		GFF2765	0.26	-0.3
2,797,937	-		GFF2765	0.26	-0.6
2,797,944	+		GFF2765	0.26	-2.4
2,797,944	+		GFF2765	0.26	+0.6
2,797,944	+		GFF2765	0.26	-0.1
2,797,944	+		GFF2765	0.26	-0.9
2,797,952	-		GFF2765	0.27	-0.4
2,797,956	+		GFF2765	0.27	-0.8
2,797,956	+		GFF2765	0.27	+1.1
2,797,956	+		GFF2765	0.27	-1.4
2,797,958	+		GFF2765	0.27	+0.2
2,797,964	-		GFF2765	0.27	-0.4
2,797,964	-		GFF2765	0.27	-1.2
2,797,964	-		GFF2765	0.27	+0.5
2,797,964	-		GFF2765	0.27	-1.5
2,797,964	-		GFF2765	0.27	-1.7
2,797,964	-		GFF2765	0.27	-0.6
2,797,974	-		GFF2765	0.28	+1.4
2,797,989	+		GFF2765	0.29	+0.2
2,797,989	-		GFF2765	0.29	-0.4
2,797,996	-		GFF2765	0.29	+1.0
2,798,016	-		GFF2765	0.30	-0.2
2,798,026	+		GFF2765	0.31	-0.6
2,798,026	+		GFF2765	0.31	-0.8
2,798,034	-		GFF2765	0.31	-0.8
2,798,040	+		GFF2765	0.31	+0.2
2,798,047	-		GFF2765	0.32	-1.6
2,798,047	-		GFF2765	0.32	+0.5
2,798,064	+		GFF2765	0.33	-0.7
2,798,073	+		GFF2765	0.33	+0.5
2,798,074	+		GFF2765	0.33	+0.4
2,798,082	-		GFF2765	0.34	-0.4
2,798,089	+		GFF2765	0.34	-0.2
2,798,089	+		GFF2765	0.34	+0.4
2,798,097	+		GFF2765	0.34	+0.2
2,798,105	-		GFF2765	0.35	+0.9
2,798,105	-		GFF2765	0.35	-0.8
2,798,105	-		GFF2765	0.35	-0.2
2,798,126	+		GFF2765	0.36	+0.0
2,798,131	+		GFF2765	0.36	+0.9
2,798,152	+		GFF2765	0.37	-0.0
2,798,160	+		GFF2765	0.38	-1.3
2,798,182	+		GFF2765	0.39	-1.2
2,798,182	+		GFF2765	0.39	-0.8
2,798,190	+		GFF2765	0.39	-0.0
2,798,190	+		GFF2765	0.39	+0.8
2,798,196	+		GFF2765	0.40	+1.1
2,798,197	+		GFF2765	0.40	+0.8
2,798,198	-		GFF2765	0.40	+0.4
2,798,204	-		GFF2765	0.40	+0.0
2,798,212	-		GFF2765	0.40	-0.7
2,798,222	+		GFF2765	0.41	-0.3
2,798,222	+		GFF2765	0.41	-1.8
2,798,222	+		GFF2765	0.41	-1.1
2,798,230	-		GFF2765	0.41	+0.9
2,798,230	-		GFF2765	0.41	-0.6
2,798,243	-		GFF2765	0.42	-0.4
2,798,243	-		GFF2765	0.42	-0.1
2,798,249	-		GFF2765	0.42	-0.9
2,798,249	-		GFF2765	0.42	-0.4
2,798,249	-		GFF2765	0.42	+0.0
2,798,254	-		GFF2765	0.43	+0.0
2,798,256	-		GFF2765	0.43	-0.4
2,798,278	-		GFF2765	0.44	+0.0
2,798,306	+		GFF2765	0.46	+0.2
2,798,309	+		GFF2765	0.46	-1.8
2,798,315	-		GFF2765	0.46	-0.1
2,798,327	-		GFF2765	0.47	+0.9
2,798,332	+		GFF2765	0.47	-0.5
2,798,332	+		GFF2765	0.47	+2.0
2,798,332	+		GFF2765	0.47	-0.0
2,798,334	-		GFF2765	0.47	+0.6
2,798,340	-		GFF2765	0.47	-0.7
2,798,340	-		GFF2765	0.47	-0.3
2,798,340	-		GFF2765	0.47	-0.5
2,798,340	-		GFF2765	0.47	+0.6
2,798,340	-		GFF2765	0.47	+0.2
2,798,340	-		GFF2765	0.47	-0.0
2,798,340	-		GFF2765	0.47	-0.2
2,798,340	-		GFF2765	0.47	-0.2
2,798,340	-		GFF2765	0.47	+0.4
2,798,340	-		GFF2765	0.47	-0.6
2,798,342	+		GFF2765	0.47	-2.0
2,798,342	+		GFF2765	0.47	+0.8
2,798,350	-		GFF2765	0.48	-1.7
2,798,350	-		GFF2765	0.48	-0.6
2,798,350	-		GFF2765	0.48	+0.2
2,798,370	-		GFF2765	0.49	-0.1
2,798,389	+		GFF2765	0.50	-0.1
2,798,389	+		GFF2765	0.50	-0.0
2,798,397	-		GFF2765	0.50	-0.8
2,798,397	-		GFF2765	0.50	+1.0
2,798,397	-		GFF2765	0.50	+0.4
2,798,417	+		GFF2765	0.51	-2.5
2,798,425	-		GFF2765	0.52	+1.0
2,798,479	+		GFF2765	0.55	-0.1
2,798,489	+		GFF2765	0.55	-0.8
2,798,496	+		GFF2765	0.56	-1.4
2,798,529	-		GFF2765	0.57	-0.6
2,798,529	-		GFF2765	0.57	-1.0
2,798,548	+		GFF2765	0.58	-1.0
2,798,548	+		GFF2765	0.58	-1.0
2,798,552	+		GFF2765	0.59	-0.1
2,798,556	-		GFF2765	0.59	-0.2
2,798,586	-		GFF2765	0.60	-0.8
2,798,599	-		GFF2765	0.61	-0.5
2,798,622	+		GFF2765	0.62	+0.0
2,798,627	+		GFF2765	0.63	+0.4
2,798,630	-		GFF2765	0.63	+0.7
2,798,641	+		GFF2765	0.63	+0.0
2,798,673	+		GFF2765	0.65	-1.5
2,798,677	-		GFF2765	0.65	-0.0
2,798,681	-		GFF2765	0.66	-1.4
2,798,681	-		GFF2765	0.66	-0.6
2,798,683	+		GFF2765	0.66	-1.7
2,798,683	+		GFF2765	0.66	+0.5
2,798,691	-		GFF2765	0.66	-0.7
2,798,709	+		GFF2765	0.67	-0.0
2,798,717	+		GFF2765	0.67	+0.4
2,798,720	-		GFF2765	0.68	-0.2
2,798,722	+		GFF2765	0.68	+1.1
2,798,722	+		GFF2765	0.68	-0.7
2,798,722	+		GFF2765	0.68	-2.0
2,798,722	+		GFF2765	0.68	+0.1
2,798,722	+		GFF2765	0.68	-0.9
2,798,722	+		GFF2765	0.68	-0.2
2,798,725	-		GFF2765	0.68	-0.6
2,798,727	+		GFF2765	0.68	-0.9
2,798,730	-		GFF2765	0.68	+1.7
2,798,730	-		GFF2765	0.68	+0.4
2,798,730	-		GFF2765	0.68	+0.3
2,798,730	-		GFF2765	0.68	-0.4
2,798,730	-		GFF2765	0.68	-1.9
2,798,730	-		GFF2765	0.68	+0.1
2,798,730	-		GFF2765	0.68	+1.6
2,798,730	-		GFF2765	0.68	+2.0
2,798,730	-		GFF2765	0.68	+0.5
2,798,730	-		GFF2765	0.68	-0.0
2,798,735	-		GFF2765	0.68	-0.6
2,798,750	-		GFF2765	0.69	-0.6
2,798,763	-		GFF2765	0.70	-0.1
2,798,839	-		GFF2765	0.74	-0.2
2,798,839	-		GFF2765	0.74	-1.9
2,798,856	+		GFF2765	0.75	-1.8
2,798,910	+		GFF2765	0.78	+0.4
2,798,918	-		GFF2765	0.78	-0.7
2,798,918	-		GFF2765	0.78	-0.3
2,798,918	-		GFF2765	0.78	-0.4
2,798,918	-		GFF2765	0.78	-0.2
2,798,922	+		GFF2765	0.78	+0.8
2,798,923	+		GFF2765	0.78	-1.7
2,798,923	-		GFF2765	0.78	-0.9
2,798,923	-		GFF2765	0.78	+0.4
2,798,928	-		GFF2765	0.79	-0.8
2,798,928	-		GFF2765	0.79	-0.1
2,798,935	+		GFF2765	0.79	+0.4
2,798,935	+		GFF2765	0.79	+0.5
2,798,943	-		GFF2765	0.80	-1.4
2,798,943	-		GFF2765	0.80	-1.5
2,799,000	-		GFF2765	0.83	-0.5
2,799,001	+		GFF2765	0.83	-0.5
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