Strain Fitness in Sphingobium sp. HT1-2 around GFF2760

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,789,004	+		GFF2759	0.47	+0.5
2,789,021	-		GFF2759	0.48	-0.7
2,789,027	-		GFF2759	0.48	-0.3
2,789,034	+		GFF2759	0.48	-0.3
2,789,078	+		GFF2759	0.51	-0.7
2,789,079	+		GFF2759	0.51	-0.9
2,789,088	+		GFF2759	0.52	-1.7
2,789,088	+		GFF2759	0.52	-1.6
2,789,094	-		GFF2759	0.52	+0.8
2,789,141	-		GFF2759	0.55	+0.3
2,789,151	+		GFF2759	0.56	-0.0
2,789,153	+		GFF2759	0.56	-0.5
2,789,153	+		GFF2759	0.56	-0.9
2,789,153	+		GFF2759	0.56	+1.1
2,789,153	+		GFF2759	0.56	+0.4
2,789,153	+		GFF2759	0.56	-1.2
2,789,153	+		GFF2759	0.56	-0.2
2,789,153	+		GFF2759	0.56	-1.3
2,789,153	+		GFF2759	0.56	+0.6
2,789,154	-		GFF2759	0.56	-0.4
2,789,158	+		GFF2759	0.56	+0.0
2,789,159	-		GFF2759	0.56	+0.2
2,789,161	-		GFF2759	0.56	-0.5
2,789,161	-		GFF2759	0.56	-0.1
2,789,161	-		GFF2759	0.56	-0.7
2,789,161	-		GFF2759	0.56	+0.6
2,789,161	-		GFF2759	0.56	-0.8
2,789,161	-		GFF2759	0.56	-1.1
2,789,161	-		GFF2759	0.56	+0.9
2,789,161	-		GFF2759	0.56	-1.8
2,789,161	-		GFF2759	0.56	-1.3
2,789,161	-		GFF2759	0.56	+0.4
2,789,169	+		GFF2759	0.57	-0.4
2,789,174	+		GFF2759	0.57	-0.7
2,789,177	-		GFF2759	0.57	+0.4
2,789,177	-		GFF2759	0.57	+0.2
2,789,177	-		GFF2759	0.57	-0.4
2,789,177	-		GFF2759	0.57	+0.1
2,789,177	-		GFF2759	0.57	-0.1
2,789,182	-		GFF2759	0.57	+0.2
2,789,191	-		GFF2759	0.58	-0.2
2,789,212	+		GFF2759	0.59	-0.3
2,789,256	+		GFF2759	0.62	+1.1
2,789,257	-		GFF2759	0.62	-1.5
2,789,257	-		GFF2759	0.62	-0.3
2,789,262	-		GFF2759	0.62	-0.9
2,789,277	+		GFF2759	0.63	-0.2
2,789,285	-		GFF2759	0.64	-1.3
2,789,288	-		GFF2759	0.64	+0.9
2,789,311	-		GFF2759	0.65	-0.6
2,789,316	-		GFF2759	0.66	+0.0
2,789,316	-		GFF2759	0.66	-0.3
2,789,316	-		GFF2759	0.66	-1.8
2,789,316	-		GFF2759	0.66	-0.5
2,789,334	+		GFF2759	0.67	-1.6
2,789,342	-		GFF2759	0.67	-1.9
2,789,352	+		GFF2759	0.68	-0.3
2,789,353	+		GFF2759	0.68	-0.9
2,789,358	+		GFF2759	0.68	-1.4
2,789,358	+		GFF2759	0.68	+0.3
2,789,358	+		GFF2759	0.68	+0.1
2,789,358	+		GFF2759	0.68	-0.2
2,789,358	+		GFF2759	0.68	+0.4
2,789,360	-		GFF2759	0.68	-0.2
2,789,360	-		GFF2759	0.68	-0.5
2,789,361	-		GFF2759	0.68	+0.2
2,789,366	-		GFF2759	0.69	-0.3
2,789,366	-		GFF2759	0.69	-0.6
2,789,366	-		GFF2759	0.69	+1.2
2,789,366	-		GFF2759	0.69	+0.7
2,789,366	-		GFF2759	0.69	-0.5
2,789,374	+		GFF2759	0.69	-0.1
2,789,384	+		GFF2759	0.70	-0.3
2,789,390	-		GFF2759	0.70	+1.1
2,789,390	-		GFF2759	0.70	-1.3
2,789,391	+		GFF2759	0.70	-1.1
2,789,392	-		GFF2759	0.70	+0.7
2,789,392	-		GFF2759	0.70	+0.5
2,789,412	-		GFF2759	0.71	+0.2
2,789,422	-		GFF2759	0.72	-1.0
2,789,470	+		GFF2759	0.75	+0.6
2,789,478	-		GFF2759	0.76	+0.1
2,789,485	+		GFF2759	0.76	-0.7
2,789,493	-		GFF2759	0.76	-0.3
2,789,503	-		GFF2759	0.77	+0.0
2,789,514	+		GFF2759	0.78	+0.2
2,789,534	-		GFF2759	0.79	-1.9
2,789,535	-		GFF2759	0.79	+1.0
2,789,537	+		GFF2759	0.79	-1.2
2,789,551	-		GFF2759	0.80	-0.5
2,789,568	-		GFF2759	0.81	-0.5
2,789,568	-		GFF2759	0.81	+0.2
2,789,613	+		GFF2759	0.84	-0.0
2,789,613	+		GFF2759	0.84	-2.2
2,789,613	+		GFF2759	0.84	-1.6
2,789,613	+		GFF2759	0.84	-1.7
2,789,613	+		GFF2759	0.84	-0.5
2,789,613	+		GFF2759	0.84	-1.3
2,789,613	+		GFF2759	0.84	-0.7
2,789,613	+		GFF2759	0.84	-1.0
2,789,613	+		GFF2759	0.84	-2.5
2,789,621	-		GFF2759	0.84	+0.7
2,789,621	-		GFF2759	0.84	+0.3
2,789,621	-		GFF2759	0.84	-0.5
2,789,621	-		GFF2759	0.84	-0.6
2,789,621	-		GFF2759	0.84	+1.2
2,789,621	-		GFF2759	0.84	-0.5
2,789,621	-		GFF2759	0.84	-2.2
2,789,638	+		GFF2759	0.85	-0.0
2,789,638	+		GFF2759	0.85	+0.1
2,789,638	+		GFF2759	0.85	-0.6
2,789,646	-		GFF2759	0.86	-0.0
2,789,646	-		GFF2759	0.86	-1.0
2,789,660	+		GFF2759	0.87	+0.5
2,789,660	+		GFF2759	0.87	+1.0
2,789,668	+		GFF2759	0.87	-0.3
2,789,668	+		GFF2759	0.87	-0.4
2,789,668	-		GFF2759	0.87	-0.4
2,789,668	-		GFF2759	0.87	-0.5
2,789,676	-		GFF2759	0.88	-1.3
2,789,678	-		GFF2759	0.88	-0.1
2,789,680	+		GFF2759	0.88	-0.2
2,789,685	+		GFF2759	0.88	-0.8
2,789,685	+		GFF2759	0.88	-1.2
2,789,685	+		GFF2759	0.88	-2.0
2,789,685	+		GFF2759	0.88	-0.6
2,789,685	+		GFF2759	0.88	+1.4
2,789,685	+		GFF2759	0.88	+0.5
2,789,687	+		GFF2759	0.88	-0.5
2,789,693	-		GFF2759	0.89	+0.4
2,789,693	-		GFF2759	0.89	-1.6
2,789,693	-		GFF2759	0.89	-0.3
2,789,693	-		GFF2759	0.89	+0.1
2,789,693	-		GFF2759	0.89	+0.6
2,789,705	+		GFF2759	0.89	+0.1
2,789,705	+		GFF2759	0.89	-0.4
2,789,706	+		GFF2759	0.89	-0.9
2,789,706	+		GFF2759	0.89	-0.6
2,789,716	+				-0.9
2,789,718	+				-1.2
2,789,723	+				-0.6
2,789,723	+				-0.4
2,789,724	-				-0.9
2,789,726	-				-1.3
2,789,731	-				-0.3
2,789,734	+				-0.9
2,789,742	-				-0.7
2,789,748	-				-0.5
2,789,770	+				-0.1
2,789,772	-				-0.3
2,789,818	+				+0.7
2,789,826	-				+1.4
2,789,830	+				-0.7
2,789,830	+				+0.7
2,789,838	-				-1.1
2,789,844	-				+0.2
2,789,862	-				-0.0
2,789,862	-				-1.9
2,789,885	-				-0.6
2,789,888	+				-1.1
2,789,888	+				-0.2
2,789,891	+				+0.5
2,789,891	+				+0.1
2,789,891	+				-0.3
2,789,899	-				-0.2
2,789,899	-				+0.5
2,789,901	+				-1.6
2,789,919	+				-0.1
2,789,950	-				-2.1
2,789,964	+				-1.4
2,789,973	-				-0.8
2,790,008	+				-0.6
2,790,008	+				+0.0
2,790,009	+				-0.6
2,790,017	-				+1.0
2,790,017	-				+0.2
2,790,017	-				+0.2
2,790,042	+				+0.5
2,790,045	-				-0.6
2,790,047	+				-2.6
2,790,047	+				-1.1
2,790,047	+				-2.2
2,790,047	+				-0.7
2,790,047	+				+0.3
2,790,047	+				-0.8
2,790,047	+				+0.3
2,790,047	+				+0.3
2,790,047	+				+0.9
2,790,047	+				+0.1
2,790,047	+				-2.5
2,790,047	+				+1.6
2,790,047	+				-2.7
2,790,047	+				-1.2
2,790,047	+				+0.1
2,790,047	+				+0.8
2,790,047	+				-1.1
2,790,050	-				-2.5
2,790,052	+				+0.6
2,790,052	+				-3.4
2,790,055	-				+0.8
2,790,055	-				+0.9
2,790,055	-				-0.9
2,790,055	-				-0.1
2,790,055	-				+0.2
2,790,055	-				-2.4
2,790,055	-				-0.5
2,790,055	-				-1.0
2,790,055	-				+0.0
2,790,055	-				+1.4
2,790,055	-				-0.2
2,790,055	-				-1.7
2,790,055	-				-0.5
2,790,055	-				-0.3
2,790,060	-				+0.5
2,790,060	-				-1.1
2,790,060	-				-0.5
2,790,073	+				-0.4
2,790,101	+				-1.4
2,790,101	+				+0.4
2,790,104	-				-1.3
2,790,109	-				+0.0
2,790,122	+				-1.3
2,790,122	+				+0.1
2,790,130	-				-1.0
2,790,137	+				-1.3
2,790,137	+				-0.7
2,790,145	-				-0.5
2,790,159	+				+0.4
2,790,169	+				-0.0
2,790,169	+				+0.4
2,790,169	+				-1.1
2,790,169	+				+0.0
2,790,182	+				-0.5
2,790,192	-				-1.1
2,790,215	+				-2.9
2,790,215	+				+1.0
2,790,228	-		GFF2760	0.10	+0.7
2,790,241	+		GFF2760	0.11	+1.1
2,790,241	+		GFF2760	0.11	-0.6
2,790,241	+		GFF2760	0.11	+1.1
2,790,241	+		GFF2760	0.11	-0.4
2,790,241	+		GFF2760	0.11	+0.7
2,790,249	-		GFF2760	0.11	-0.5
2,790,249	-		GFF2760	0.11	-1.2
2,790,262	+		GFF2760	0.12	-0.3
2,790,265	+		GFF2760	0.12	-0.2
2,790,267	-		GFF2760	0.12	-0.2
2,790,271	-		GFF2760	0.12	+0.3
2,790,273	+		GFF2760	0.12	-1.6
2,790,287	-		GFF2760	0.12	+0.2
2,790,299	+		GFF2760	0.13	-0.1
2,790,308	-		GFF2760	0.13	+0.1
2,790,310	+		GFF2760	0.13	-2.5
2,790,312	+		GFF2760	0.13	-2.0
2,790,312	+		GFF2760	0.13	+0.0
2,790,312	+		GFF2760	0.13	+0.4
2,790,312	+		GFF2760	0.13	+0.6
2,790,312	+		GFF2760	0.13	-0.1
2,790,312	+		GFF2760	0.13	-1.3
2,790,312	+		GFF2760	0.13	-1.8
2,790,312	+		GFF2760	0.13	+0.1
2,790,312	+		GFF2760	0.13	+0.1
2,790,312	+		GFF2760	0.13	+0.3
2,790,312	+		GFF2760	0.13	-0.6
2,790,312	+		GFF2760	0.13	-2.8
2,790,312	+		GFF2760	0.13	+0.1
2,790,312	+		GFF2760	0.13	+0.2
2,790,312	+		GFF2760	0.13	+0.4
2,790,317	+		GFF2760	0.14	+0.1
2,790,319	-		GFF2760	0.14	-1.5
2,790,320	-		GFF2760	0.14	-1.1
2,790,320	-		GFF2760	0.14	+0.7
2,790,320	-		GFF2760	0.14	-0.7
2,790,320	-		GFF2760	0.14	-1.7
2,790,320	-		GFF2760	0.14	-1.7
2,790,320	-		GFF2760	0.14	-0.1
2,790,320	-		GFF2760	0.14	-0.4
2,790,320	-		GFF2760	0.14	-0.0
2,790,320	-		GFF2760	0.14	-1.3
2,790,320	-		GFF2760	0.14	-0.3
2,790,320	-		GFF2760	0.14	-0.4
2,790,320	-		GFF2760	0.14	-1.3
2,790,320	-		GFF2760	0.14	+0.1
2,790,320	-		GFF2760	0.14	-0.3
2,790,320	-		GFF2760	0.14	-1.0
2,790,320	-		GFF2760	0.14	-0.9
2,790,320	-		GFF2760	0.14	+0.4
2,790,320	-		GFF2760	0.14	+0.5
2,790,320	-		GFF2760	0.14	-0.1
2,790,320	-		GFF2760	0.14	-0.8
2,790,320	-		GFF2760	0.14	+0.5
2,790,320	-		GFF2760	0.14	+0.4
2,790,322	+		GFF2760	0.14	-0.4
2,790,330	-		GFF2760	0.14	-0.7
2,790,353	+		GFF2760	0.15	-0.8
2,790,353	+		GFF2760	0.15	+0.1
2,790,353	+		GFF2760	0.15	+0.1
2,790,353	+		GFF2760	0.15	-2.3
2,790,353	+		GFF2760	0.15	-0.1
2,790,355	+		GFF2760	0.15	+0.5
2,790,355	+		GFF2760	0.15	-0.6
2,790,355	+		GFF2760	0.15	-1.3
2,790,355	+		GFF2760	0.15	+1.0
2,790,355	+		GFF2760	0.15	-0.8
2,790,355	+		GFF2760	0.15	-0.7
2,790,355	+		GFF2760	0.15	-2.3
2,790,355	+		GFF2760	0.15	-0.1
2,790,355	+		GFF2760	0.15	+0.6
2,790,355	+		GFF2760	0.15	-0.1
2,790,355	+		GFF2760	0.15	-2.4
2,790,355	+		GFF2760	0.15	-1.9
2,790,355	+		GFF2760	0.15	+0.5
2,790,355	+		GFF2760	0.15	-0.4
2,790,355	+		GFF2760	0.15	-0.3
2,790,355	+		GFF2760	0.15	+0.3
2,790,355	+		GFF2760	0.15	+0.5
2,790,355	+		GFF2760	0.15	+0.8
2,790,355	+		GFF2760	0.15	-0.1
2,790,356	-		GFF2760	0.15	-0.7
2,790,361	-		GFF2760	0.15	-0.4
2,790,361	-		GFF2760	0.15	-0.9
2,790,361	-		GFF2760	0.15	-0.1
2,790,363	-		GFF2760	0.15	-1.6
2,790,363	-		GFF2760	0.15	-0.6
2,790,363	-		GFF2760	0.15	+0.7
2,790,363	-		GFF2760	0.15	-1.7
2,790,363	-		GFF2760	0.15	+0.7
2,790,363	-		GFF2760	0.15	-0.3
2,790,363	-		GFF2760	0.15	-0.3
2,790,363	-		GFF2760	0.15	-0.9
2,790,363	-		GFF2760	0.15	+0.5
2,790,363	-		GFF2760	0.15	-0.8
2,790,363	-		GFF2760	0.15	-0.6
2,790,363	-		GFF2760	0.15	-1.2
2,790,363	-		GFF2760	0.15	-1.2
2,790,363	-		GFF2760	0.15	-0.6
2,790,363	-		GFF2760	0.15	-0.6
2,790,363	-		GFF2760	0.15	-0.9
2,790,363	-		GFF2760	0.15	-0.6
2,790,363	-		GFF2760	0.15	+0.8
2,790,363	-		GFF2760	0.15	+0.2
2,790,363	-		GFF2760	0.15	+0.2
2,790,363	-		GFF2760	0.15	-2.1
2,790,363	-		GFF2760	0.15	+0.4
2,790,381	-		GFF2760	0.16	+0.4
2,790,388	+		GFF2760	0.16	-0.6
2,790,394	+		GFF2760	0.16	-0.5
2,790,396	-		GFF2760	0.17	+0.4
2,790,419	+		GFF2760	0.17	-0.9
2,790,419	+		GFF2760	0.17	-0.9
2,790,427	-		GFF2760	0.18	-0.3
2,790,434	-		GFF2760	0.18	-1.5
2,790,454	+		GFF2760	0.19	-0.9
2,790,454	-		GFF2760	0.19	-1.3
2,790,478	-		GFF2760	0.20	-1.2
2,790,481	-		GFF2760	0.20	-1.3
2,790,487	-		GFF2760	0.20	-1.3
2,790,502	-		GFF2760	0.20	-0.7
2,790,504	+		GFF2760	0.21	-0.5
2,790,504	+		GFF2760	0.21	+0.9
2,790,525	+		GFF2760	0.21	+0.1
2,790,537	+		GFF2760	0.22	-1.7
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2,791,013	-		GFF2760	0.39	-0.9
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2,791,013	-		GFF2760	0.39	-0.9
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