Strain Fitness in Sphingobium sp. HT1-2 around GFF2719

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,741,497	-		GFF2718	0.20	-0.9
2,741,497	-		GFF2718	0.20	+0.8
2,741,506	+		GFF2718	0.21	+1.1
2,741,514	-		GFF2718	0.22	-0.4
2,741,514	-		GFF2718	0.22	-1.4
2,741,524	+		GFF2718	0.22	-1.1
2,741,524	+		GFF2718	0.22	+0.0
2,741,524	+		GFF2718	0.22	-0.7
2,741,524	+		GFF2718	0.22	-1.2
2,741,524	+		GFF2718	0.22	-0.7
2,741,524	+		GFF2718	0.22	-0.4
2,741,532	-		GFF2718	0.23	+0.3
2,741,532	-		GFF2718	0.23	-0.4
2,741,532	-		GFF2718	0.23	-2.1
2,741,532	-		GFF2718	0.23	+0.8
2,741,537	-		GFF2718	0.23	-0.9
2,741,539	-		GFF2718	0.24	+0.1
2,741,546	+		GFF2718	0.24	+0.4
2,741,554	-		GFF2718	0.25	-0.5
2,741,560	+		GFF2718	0.25	+0.5
2,741,565	+		GFF2718	0.26	-2.3
2,741,568	-		GFF2718	0.26	-2.2
2,741,573	-		GFF2718	0.26	+0.1
2,741,573	-		GFF2718	0.26	+0.3
2,741,573	-		GFF2718	0.26	-1.4
2,741,582	+		GFF2718	0.27	+0.5
2,741,588	+		GFF2718	0.28	-0.4
2,741,590	-		GFF2718	0.28	+0.5
2,741,596	-		GFF2718	0.28	-0.8
2,741,596	-		GFF2718	0.28	-0.2
2,741,603	+		GFF2718	0.29	+0.7
2,741,603	+		GFF2718	0.29	-2.1
2,741,611	-		GFF2718	0.29	+0.2
2,741,620	+		GFF2718	0.30	-0.9
2,741,620	+		GFF2718	0.30	-1.8
2,741,623	+		GFF2718	0.30	-1.4
2,741,623	+		GFF2718	0.30	-0.6
2,741,623	-		GFF2718	0.30	-0.8
2,741,628	+		GFF2718	0.31	-0.3
2,741,628	+		GFF2718	0.31	-0.2
2,741,628	+		GFF2718	0.31	+0.9
2,741,628	-		GFF2718	0.31	-0.1
2,741,631	-		GFF2718	0.31	-3.4
2,741,631	-		GFF2718	0.31	+1.0
2,741,631	-		GFF2718	0.31	+0.6
2,741,633	+		GFF2718	0.31	-1.1
2,741,636	-		GFF2718	0.31	-1.7
2,741,636	-		GFF2718	0.31	+1.9
2,741,636	-		GFF2718	0.31	-0.8
2,741,641	-		GFF2718	0.32	-0.5
2,741,655	+		GFF2718	0.33	+0.6
2,741,663	-		GFF2718	0.34	+0.0
2,741,695	-		GFF2718	0.36	-1.4
2,741,730	+		GFF2718	0.39	-0.0
2,741,730	+		GFF2718	0.39	-1.2
2,741,730	+		GFF2718	0.39	-1.6
2,741,730	+		GFF2718	0.39	-0.4
2,741,730	+		GFF2718	0.39	-1.8
2,741,738	-		GFF2718	0.40	+0.7
2,741,738	-		GFF2718	0.40	+0.6
2,741,738	-		GFF2718	0.40	+0.5
2,741,763	-		GFF2718	0.42	-1.4
2,741,770	+		GFF2718	0.42	-0.3
2,741,778	-		GFF2718	0.43	-0.7
2,741,807	+		GFF2718	0.45	-0.2
2,741,815	-		GFF2718	0.46	+0.1
2,741,828	+		GFF2718	0.47	+0.8
2,741,831	-		GFF2718	0.47	-0.2
2,741,853	+		GFF2718	0.49	-2.0
2,741,853	+		GFF2718	0.49	-0.6
2,741,853	+		GFF2718	0.49	-0.3
2,741,853	+		GFF2718	0.49	+1.1
2,741,861	-		GFF2718	0.50	-0.7
2,741,861	-		GFF2718	0.50	+0.1
2,741,861	-		GFF2718	0.50	-0.1
2,741,861	-		GFF2718	0.50	-0.3
2,741,863	+		GFF2718	0.50	-0.0
2,741,863	+		GFF2718	0.50	-0.3
2,741,863	+		GFF2718	0.50	+0.2
2,741,863	+		GFF2718	0.50	+0.1
2,741,871	-		GFF2718	0.50	-1.2
2,741,871	-		GFF2718	0.50	-1.4
2,741,871	-		GFF2718	0.50	+1.1
2,741,871	-		GFF2718	0.50	-1.9
2,741,889	+		GFF2718	0.52	-1.0
2,741,890	+		GFF2718	0.52	-0.4
2,741,897	-		GFF2718	0.52	+0.2
2,741,897	-		GFF2718	0.52	-1.1
2,741,897	-		GFF2718	0.52	+0.8
2,741,914	-		GFF2718	0.54	-0.7
2,741,925	+		GFF2718	0.55	-0.1
2,741,933	-		GFF2718	0.55	+1.9
2,741,939	-		GFF2718	0.56	-0.3
2,741,943	+		GFF2718	0.56	+0.8
2,741,958	+		GFF2718	0.57	-0.1
2,741,958	+		GFF2718	0.57	-1.5
2,741,958	+		GFF2718	0.57	-1.7
2,741,958	+		GFF2718	0.57	+0.3
2,741,958	+		GFF2718	0.57	+0.1
2,741,958	+		GFF2718	0.57	+0.1
2,741,958	+		GFF2718	0.57	-0.5
2,741,966	-		GFF2718	0.58	+0.1
2,741,966	-		GFF2718	0.58	-0.4
2,741,966	-		GFF2718	0.58	-0.8
2,741,966	-		GFF2718	0.58	-1.5
2,741,966	-		GFF2718	0.58	-0.4
2,741,966	-		GFF2718	0.58	-2.9
2,741,966	-		GFF2718	0.58	+1.5
2,741,966	-		GFF2718	0.58	-1.0
2,741,972	-		GFF2718	0.58	-1.3
2,741,978	+		GFF2718	0.59	-0.9
2,741,981	-		GFF2718	0.59	+0.5
2,741,991	+		GFF2718	0.60	+0.3
2,741,999	-		GFF2718	0.61	-0.2
2,742,001	+		GFF2718	0.61	-1.0
2,742,009	-		GFF2718	0.61	+1.0
2,742,009	-		GFF2718	0.61	-1.2
2,742,009	-		GFF2718	0.61	-0.6
2,742,016	+		GFF2718	0.62	-0.4
2,742,021	+		GFF2718	0.62	+0.6
2,742,021	+		GFF2718	0.62	+0.4
2,742,021	+		GFF2718	0.62	-0.7
2,742,021	+		GFF2718	0.62	-0.1
2,742,021	+		GFF2718	0.62	+0.8
2,742,021	+		GFF2718	0.62	+1.5
2,742,026	+		GFF2718	0.63	-0.2
2,742,029	-		GFF2718	0.63	+1.7
2,742,029	-		GFF2718	0.63	-1.1
2,742,034	-		GFF2718	0.63	+0.6
2,742,039	-		GFF2718	0.64	+1.1
2,742,060	+		GFF2718	0.66	-0.5
2,742,068	-		GFF2718	0.66	+0.1
2,742,073	-		GFF2718	0.67	+0.5
2,742,073	-		GFF2718	0.67	-0.5
2,742,075	-		GFF2718	0.67	+0.4
2,742,078	-		GFF2718	0.67	+0.5
2,742,113	-		GFF2718	0.70	-0.4
2,742,113	-		GFF2718	0.70	+0.1
2,742,120	+		GFF2718	0.70	-0.2
2,742,120	+		GFF2718	0.70	+0.8
2,742,128	+		GFF2718	0.71	-0.1
2,742,128	-		GFF2718	0.71	-0.2
2,742,135	+		GFF2718	0.72	+0.4
2,742,152	+		GFF2718	0.73	+0.3
2,742,159	+		GFF2718	0.74	-0.2
2,742,177	+		GFF2718	0.75	+0.4
2,742,177	+		GFF2718	0.75	+0.4
2,742,201	-		GFF2718	0.77	-0.5
2,742,225	+		GFF2718	0.79	-1.5
2,742,226	+		GFF2718	0.79	-1.2
2,742,229	-		GFF2718	0.79	+0.2
2,742,229	-		GFF2718	0.79	-0.1
2,742,229	-		GFF2718	0.79	+0.2
2,742,234	-		GFF2718	0.80	+0.6
2,742,265	-		GFF2718	0.82	-1.7
2,742,265	-		GFF2718	0.82	+0.2
2,742,268	+		GFF2718	0.82	+0.3
2,742,274	+		GFF2718	0.83	-0.8
2,742,312	+		GFF2718	0.86	+0.2
2,742,317	+		GFF2718	0.86	-0.0
2,742,317	+		GFF2718	0.86	+0.1
2,742,325	-		GFF2718	0.87	-0.3
2,742,332	+		GFF2718	0.87	+0.7
2,742,340	-		GFF2718	0.88	-0.8
2,742,353	+		GFF2718	0.89	-0.1
2,742,361	-		GFF2718	0.90	+0.6
2,742,366	+				-1.4
2,742,388	-				-0.5
2,742,391	-				+0.3
2,742,404	+				+0.7
2,742,412	-				+1.2
2,742,426	-				-1.5
2,742,426	-				-0.8
2,742,427	+				+0.8
2,742,430	+				-0.6
2,742,430	+				-0.8
2,742,432	+				+1.5
2,742,432	+				-0.6
2,742,435	-				-0.6
2,742,435	-				-0.2
2,742,438	-				-1.0
2,742,440	-				+1.1
2,742,449	+				+0.7
2,742,469	+				-0.3
2,742,482	+				+0.4
2,742,483	-				-0.3
2,742,490	-				+0.4
2,742,498	+				+0.0
2,742,529	+		GFF2719	0.15	-0.0
2,742,533	+		GFF2719	0.16	-0.8
2,742,546	-		GFF2719	0.21	-0.2
2,742,554	-		GFF2719	0.23	+0.1
2,742,573	+		GFF2719	0.30	-1.3
2,742,598	-		GFF2719	0.38	-0.4
2,742,626	+		GFF2719	0.47	+0.1
2,742,626	+		GFF2719	0.47	-1.4
2,742,633	+		GFF2719	0.50	-0.7
2,742,667	+		GFF2719	0.61	+0.5
2,742,667	+		GFF2719	0.61	-2.2
2,742,675	-		GFF2719	0.64	-1.2
2,742,675	-		GFF2719	0.64	+1.1
2,742,675	-		GFF2719	0.64	-1.8
2,742,697	-		GFF2719	0.71	-0.4
2,742,699	+		GFF2719	0.72	-1.2
2,742,699	+		GFF2719	0.72	-0.9
2,742,699	+		GFF2719	0.72	-1.1
2,742,699	+		GFF2719	0.72	-0.2
2,742,699	-		GFF2719	0.72	-0.5
2,742,707	-		GFF2719	0.74	+0.2
2,742,707	-		GFF2719	0.74	+0.2
2,742,727	+		GFF2719	0.81	-1.3
2,742,740	-		GFF2719	0.85	-0.9
2,742,755	+				-0.3
2,742,771	-				-0.3
2,742,792	-				+0.8
2,742,813	-				+0.4
2,742,833	+				+0.1
2,742,836	+				-0.5
2,742,836	+				-0.3
2,742,836	+				-0.3
2,742,836	+				+1.6
2,742,842	+				-1.7
2,742,843	+				-1.9
2,742,844	-				-0.1
2,742,844	-				-1.3
2,742,844	-				-0.8
2,742,844	-				+1.0
2,742,851	+				+0.9
2,742,851	+				-0.5
2,742,851	+				-0.9
2,742,851	+				-0.0
2,742,851	-				-0.9
2,742,853	+				-0.9
2,742,854	-				+0.1
2,742,854	-				+0.1
2,742,854	-				+0.7
2,742,859	-				-0.9
2,742,859	-				+0.7
2,742,861	+				+0.9
2,742,869	-				+0.7
2,742,874	-				+0.3
2,742,878	+				+0.4
2,742,893	-				+0.2
2,742,927	+				-0.3
2,742,927	+				+0.1
2,742,935	+				+0.8
2,742,935	+				-0.7
2,742,957	-				-1.9
2,742,966	+				-1.3
2,742,966	+				-0.3
2,742,966	+				-0.0
2,742,966	+				+0.4
2,742,966	+				-1.9
2,742,972	-				+0.7
2,742,974	-				-1.9
2,742,974	-				-0.4
2,742,974	-				-1.7
2,742,974	-				-0.6
2,742,974	-				-0.6
2,742,974	-				-0.3
2,742,974	-				+1.5
2,742,974	-				+0.2
2,742,974	-				-0.2
2,742,974	-				-0.5
2,742,974	-				-1.6
2,742,979	-				+0.0
2,742,989	+				-0.8
2,743,007	-				+0.9
2,743,007	-				-0.3
2,743,009	+				-0.1
2,743,009	-				-0.4
2,743,013	+				-1.9
2,743,013	+				+0.2
2,743,013	+				+0.6
2,743,015	+				-0.6
2,743,017	-				-0.6
2,743,017	-				-0.7
2,743,017	-				+0.0
2,743,020	+				+0.7
2,743,020	+				-0.3
2,743,020	+				-0.5
2,743,020	+				-2.1
2,743,021	-				-0.1
2,743,021	-				+0.6
2,743,023	-				-0.5
2,743,025	+				-0.5
2,743,028	-				+0.0
2,743,033	-				-0.6
2,743,043	+				-0.4
2,743,069	-				+0.7
2,743,069	-				+0.3
2,743,084	+				-0.2
2,743,084	-				-1.2
2,743,087	-				+0.4
2,743,092	-		GFF2720	0.10	-1.4
2,743,094	-		GFF2720	0.10	+0.4
2,743,097	+		GFF2720	0.10	-0.4
2,743,109	-		GFF2720	0.11	+1.3
2,743,123	+		GFF2720	0.11	-1.9
2,743,123	+		GFF2720	0.11	-0.9
2,743,136	-		GFF2720	0.12	+0.6
2,743,222	+		GFF2720	0.14	-1.2
2,743,222	+		GFF2720	0.14	+0.9
2,743,222	+		GFF2720	0.14	+1.0
2,743,222	+		GFF2720	0.14	-0.9
2,743,222	+		GFF2720	0.14	-0.6
2,743,222	+		GFF2720	0.14	-2.2
2,743,222	+		GFF2720	0.14	+0.6
2,743,222	+		GFF2720	0.14	-1.3
2,743,222	+		GFF2720	0.14	+0.7
2,743,222	+		GFF2720	0.14	+0.5
2,743,222	+		GFF2720	0.14	-1.2
2,743,222	+		GFF2720	0.14	+1.1
2,743,222	+		GFF2720	0.14	-0.3
2,743,222	+		GFF2720	0.14	+0.7
2,743,222	+		GFF2720	0.14	+1.7
2,743,222	+		GFF2720	0.14	-0.8
2,743,222	-		GFF2720	0.14	+0.2
2,743,223	-		GFF2720	0.14	+0.2
2,743,230	-		GFF2720	0.15	-1.4
2,743,230	-		GFF2720	0.15	+1.5
2,743,230	-		GFF2720	0.15	-0.0
2,743,230	-		GFF2720	0.15	-0.1
2,743,230	-		GFF2720	0.15	-0.1
2,743,230	-		GFF2720	0.15	-0.5
2,743,230	-		GFF2720	0.15	-0.7
2,743,230	-		GFF2720	0.15	-0.4
2,743,230	-		GFF2720	0.15	-1.7
2,743,230	-		GFF2720	0.15	-0.0
2,743,230	-		GFF2720	0.15	-0.0
2,743,235	-		GFF2720	0.15	-1.8
2,743,258	+		GFF2720	0.16	+1.1
2,743,266	+		GFF2720	0.16	+0.2
2,743,269	-		GFF2720	0.16	+0.2
2,743,274	-		GFF2720	0.16	+0.0
2,743,280	+		GFF2720	0.16	+0.2
2,743,315	+		GFF2720	0.17	-1.0
2,743,315	+		GFF2720	0.17	+0.1
2,743,315	+		GFF2720	0.17	-0.4
2,743,315	+		GFF2720	0.17	-0.3
2,743,322	-		GFF2720	0.18	+0.7
2,743,323	-		GFF2720	0.18	+0.3
2,743,323	-		GFF2720	0.18	+1.0
2,743,373	+		GFF2720	0.19	+0.4
2,743,392	-		GFF2720	0.20	-0.5
2,743,394	+		GFF2720	0.20	+0.2
2,743,413	+		GFF2720	0.21	-1.9
2,743,414	+		GFF2720	0.21	-2.0
2,743,414	+		GFF2720	0.21	-0.1
2,743,414	+		GFF2720	0.21	-2.2
2,743,414	+		GFF2720	0.21	-0.3
2,743,414	+		GFF2720	0.21	+0.9
2,743,414	+		GFF2720	0.21	+0.2
2,743,421	-		GFF2720	0.21	-0.0
2,743,422	-		GFF2720	0.21	+0.2
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