Strain Fitness in Sphingobium sp. HT1-2 around GFF2674

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,689,371	+				+1.5
2,689,380	+				-1.8
2,689,385	+				-0.4
2,689,387	+				+0.4
2,689,387	+				+0.7
2,689,393	+				-2.2
2,689,395	-				-1.6
2,689,397	+				-0.9
2,689,397	+				-0.9
2,689,404	+				+0.5
2,689,404	+				+0.8
2,689,404	+				-1.7
2,689,405	-				-2.1
2,689,412	-				-1.1
2,689,428	-				-2.2
2,689,457	+				-0.2
2,689,472	-				-0.5
2,689,472	-				-0.2
2,689,472	-				-0.8
2,689,474	+				-0.4
2,689,482	-				+0.6
2,689,482	-				-0.6
2,689,483	-				-0.5
2,689,483	-				-0.0
2,689,514	-				-0.0
2,689,526	-				+0.4
2,689,528	+				-0.2
2,689,536	-				+0.4
2,689,536	-				-0.8
2,689,536	-				-0.2
2,689,536	-				-0.2
2,689,546	+				-0.3
2,689,546	+				-0.1
2,689,546	+				+0.3
2,689,546	+				+0.1
2,689,554	-				-0.8
2,689,554	-				-0.7
2,689,554	-				-0.5
2,689,598	-				-0.2
2,689,599	-				+0.1
2,689,612	+		GFF2673	0.10	+0.9
2,689,614	+		GFF2673	0.11	-0.0
2,689,614	+		GFF2673	0.11	-0.4
2,689,619	+		GFF2673	0.11	+0.5
2,689,622	-		GFF2673	0.12	-0.3
2,689,653	-		GFF2673	0.16	+0.0
2,689,677	+		GFF2673	0.20	-0.2
2,689,677	+		GFF2673	0.20	+0.3
2,689,679	+		GFF2673	0.20	+0.6
2,689,685	-		GFF2673	0.21	+0.9
2,689,692	+		GFF2673	0.22	-0.6
2,689,697	+		GFF2673	0.22	+1.1
2,689,697	+		GFF2673	0.22	+0.6
2,689,697	+		GFF2673	0.22	-1.1
2,689,705	-		GFF2673	0.24	+1.1
2,689,705	-		GFF2673	0.24	-1.7
2,689,705	-		GFF2673	0.24	+0.9
2,689,705	-		GFF2673	0.24	-0.1
2,689,720	+		GFF2673	0.26	+0.1
2,689,725	+		GFF2673	0.26	-0.4
2,689,730	+		GFF2673	0.27	-0.9
2,689,746	+		GFF2673	0.29	+0.6
2,689,767	+		GFF2673	0.32	-0.4
2,689,786	+		GFF2673	0.35	+0.1
2,689,822	+		GFF2673	0.40	+1.2
2,689,834	+		GFF2673	0.42	+0.4
2,689,852	-		GFF2673	0.44	-2.8
2,689,867	+		GFF2673	0.47	-1.9
2,689,877	+		GFF2673	0.48	+0.2
2,689,883	+		GFF2673	0.49	-1.1
2,689,883	+		GFF2673	0.49	+0.7
2,689,883	+		GFF2673	0.49	-0.3
2,689,883	+		GFF2673	0.49	-1.4
2,689,888	+		GFF2673	0.50	-2.1
2,689,888	+		GFF2673	0.50	-1.2
2,689,888	+		GFF2673	0.50	+0.9
2,689,891	-		GFF2673	0.50	-0.0
2,689,891	-		GFF2673	0.50	+1.2
2,689,891	-		GFF2673	0.50	-1.8
2,689,891	-		GFF2673	0.50	+1.1
2,689,891	-		GFF2673	0.50	+0.9
2,689,891	-		GFF2673	0.50	-1.5
2,689,891	-		GFF2673	0.50	-1.6
2,689,891	-		GFF2673	0.50	+0.0
2,689,891	-		GFF2673	0.50	-0.4
2,689,896	-		GFF2673	0.51	+1.1
2,689,896	-		GFF2673	0.51	-2.3
2,689,904	+		GFF2673	0.52	-1.6
2,689,904	+		GFF2673	0.52	-1.9
2,689,904	+		GFF2673	0.52	-0.4
2,689,904	+		GFF2673	0.52	+0.5
2,689,904	+		GFF2673	0.52	+0.1
2,689,904	+		GFF2673	0.52	-0.7
2,689,904	+		GFF2673	0.52	-1.9
2,689,904	+		GFF2673	0.52	-1.0
2,689,906	-		GFF2673	0.52	-0.8
2,689,911	+		GFF2673	0.53	-0.4
2,689,912	-		GFF2673	0.53	-0.2
2,689,912	-		GFF2673	0.53	+0.3
2,689,912	-		GFF2673	0.53	-0.2
2,689,912	-		GFF2673	0.53	-0.1
2,689,912	-		GFF2673	0.53	+0.5
2,689,912	-		GFF2673	0.53	+0.4
2,689,912	-		GFF2673	0.53	-0.6
2,689,912	-		GFF2673	0.53	+0.8
2,689,912	-		GFF2673	0.53	+0.1
2,689,912	-		GFF2673	0.53	-0.5
2,689,914	-		GFF2673	0.53	-2.2
2,689,919	-		GFF2673	0.54	-1.9
2,689,919	-		GFF2673	0.54	-1.2
2,689,943	-		GFF2673	0.57	-0.0
2,689,943	-		GFF2673	0.57	+0.2
2,689,962	-		GFF2673	0.60	+0.5
2,689,964	+		GFF2673	0.60	-1.1
2,689,964	+		GFF2673	0.60	+0.7
2,689,964	+		GFF2673	0.60	-0.1
2,689,964	+		GFF2673	0.60	-0.6
2,689,964	+		GFF2673	0.60	-0.3
2,689,972	-		GFF2673	0.61	+0.4
2,689,972	-		GFF2673	0.61	-0.6
2,689,972	-		GFF2673	0.61	-0.1
2,689,972	-		GFF2673	0.61	+1.9
2,689,976	+		GFF2673	0.62	-0.5
2,689,979	-		GFF2673	0.62	-0.8
2,689,979	-		GFF2673	0.62	-0.0
2,690,010	-		GFF2673	0.67	+0.3
2,690,018	+		GFF2673	0.68	-2.0
2,690,026	-		GFF2673	0.69	+0.2
2,690,026	-		GFF2673	0.69	+1.5
2,690,027	-		GFF2673	0.69	-0.5
2,690,082	-		GFF2673	0.77	+0.2
2,690,089	+		GFF2673	0.78	-1.4
2,690,098	+		GFF2673	0.79	-1.6
2,690,106	-		GFF2673	0.80	-0.0
2,690,111	+		GFF2673	0.81	+0.3
2,690,111	+		GFF2673	0.81	-0.4
2,690,111	+		GFF2673	0.81	-1.5
2,690,111	+		GFF2673	0.81	-1.1
2,690,111	+		GFF2673	0.81	-0.0
2,690,111	+		GFF2673	0.81	-0.9
2,690,111	+		GFF2673	0.81	-0.3
2,690,111	+		GFF2673	0.81	+0.2
2,690,111	+		GFF2673	0.81	-0.8
2,690,111	+		GFF2673	0.81	-0.5
2,690,111	+		GFF2673	0.81	+0.6
2,690,111	+		GFF2673	0.81	-1.7
2,690,111	+		GFF2673	0.81	+1.2
2,690,111	+		GFF2673	0.81	-1.0
2,690,111	+		GFF2673	0.81	-0.8
2,690,111	+		GFF2673	0.81	-1.7
2,690,111	+		GFF2673	0.81	+0.7
2,690,116	+		GFF2673	0.82	+0.3
2,690,119	-		GFF2673	0.82	-1.0
2,690,119	-		GFF2673	0.82	+0.1
2,690,119	-		GFF2673	0.82	+1.0
2,690,119	-		GFF2673	0.82	+1.1
2,690,119	-		GFF2673	0.82	+0.5
2,690,119	-		GFF2673	0.82	+0.2
2,690,119	-		GFF2673	0.82	-0.6
2,690,119	-		GFF2673	0.82	+0.2
2,690,119	-		GFF2673	0.82	-0.0
2,690,119	-		GFF2673	0.82	+1.0
2,690,119	-		GFF2673	0.82	+0.5
2,690,119	-		GFF2673	0.82	-0.1
2,690,121	+		GFF2673	0.83	-1.2
2,690,121	+		GFF2673	0.83	+0.7
2,690,121	+		GFF2673	0.83	+1.4
2,690,121	+		GFF2673	0.83	-0.0
2,690,121	+		GFF2673	0.83	+0.6
2,690,121	+		GFF2673	0.83	-1.5
2,690,121	+		GFF2673	0.83	+0.6
2,690,121	+		GFF2673	0.83	-1.0
2,690,121	-		GFF2673	0.83	-0.3
2,690,124	-		GFF2673	0.83	-0.4
2,690,124	-		GFF2673	0.83	+0.0
2,690,129	-		GFF2673	0.84	-0.3
2,690,129	-		GFF2673	0.84	-0.2
2,690,129	-		GFF2673	0.84	-1.8
2,690,129	-		GFF2673	0.84	+0.6
2,690,129	-		GFF2673	0.84	-2.0
2,690,129	-		GFF2673	0.84	+0.0
2,690,129	-		GFF2673	0.84	+0.1
2,690,129	-		GFF2673	0.84	-2.8
2,690,129	-		GFF2673	0.84	+0.6
2,690,129	-		GFF2673	0.84	+0.6
2,690,129	-		GFF2673	0.84	+0.6
2,690,129	-		GFF2673	0.84	+0.7
2,690,131	+		GFF2673	0.84	-2.0
2,690,139	-		GFF2673	0.85	+0.4
2,690,153	-		GFF2673	0.87	-0.1
2,690,182	-				-0.5
2,690,190	-				+0.4
2,690,214	+				-0.4
2,690,216	-				-1.2
2,690,233	+				+0.8
2,690,238	+				+0.2
2,690,238	+				-1.9
2,690,238	+				-0.5
2,690,238	+				+0.6
2,690,238	+				-0.0
2,690,238	+				-0.4
2,690,238	+				-0.7
2,690,238	+				+0.0
2,690,238	+				+0.1
2,690,238	+				-1.0
2,690,238	+				-0.9
2,690,246	-				-1.7
2,690,246	-				+1.4
2,690,246	-				+0.4
2,690,246	-				+0.2
2,690,246	-				+0.9
2,690,246	-				-1.5
2,690,246	-				+0.2
2,690,246	-				+0.5
2,690,246	-				-2.2
2,690,246	-				+0.5
2,690,246	-				-0.8
2,690,246	-				+0.1
2,690,266	+				-0.4
2,690,266	+				+0.0
2,690,266	+				-0.6
2,690,266	+				+0.5
2,690,269	-				-1.5
2,690,271	+				-0.0
2,690,274	-				+0.1
2,690,274	-				+0.0
2,690,276	+				-0.8
2,690,277	+				+0.6
2,690,279	-				-0.6
2,690,292	+				-0.9
2,690,297	+				-0.2
2,690,300	-				+1.2
2,690,300	-				-1.9
2,690,305	-				+1.1
2,690,338	-				+0.6
2,690,340	+				-0.3
2,690,340	+				+0.3
2,690,340	+				+0.2
2,690,340	+				-0.9
2,690,348	-				-0.3
2,690,364	-				-1.2
2,690,393	-				+0.2
2,690,414	+				+0.6
2,690,414	-				-0.8
2,690,422	-				+0.3
2,690,424	+				-1.3
2,690,427	-				+0.4
2,690,429	+				-0.1
2,690,437	-				+0.8
2,690,444	+				-1.1
2,690,453	-				+0.2
2,690,453	-				-0.5
2,690,464	+				+0.2
2,690,484	-				+0.3
2,690,513	+				-0.8
2,690,516	+				+0.1
2,690,521	+				+0.4
2,690,521	-				-1.4
2,690,524	-				+0.2
2,690,528	-				-0.3
2,690,528	-				+0.0
2,690,528	-				+0.9
2,690,530	+				-0.2
2,690,530	+				+1.8
2,690,530	+				+1.9
2,690,535	+				-0.0
2,690,535	+				-1.7
2,690,538	-				+0.7
2,690,538	-				-0.2
2,690,538	-				-0.8
2,690,540	+				+0.2
2,690,543	-				+1.3
2,690,550	-				-0.1
2,690,557	+		GFF2674	0.10	-0.0
2,690,565	-		GFF2674	0.10	-1.5
2,690,565	-		GFF2674	0.10	+0.7
2,690,565	-		GFF2674	0.10	-0.6
2,690,593	+		GFF2674	0.12	-0.2
2,690,593	+		GFF2674	0.12	-0.6
2,690,601	-		GFF2674	0.12	+0.5
2,690,601	-		GFF2674	0.12	-0.2
2,690,616	-		GFF2674	0.13	-1.6
2,690,617	-		GFF2674	0.13	+0.8
2,690,617	-		GFF2674	0.13	-1.1
2,690,622	-		GFF2674	0.14	+0.6
2,690,624	+		GFF2674	0.14	+0.1
2,690,626	-		GFF2674	0.14	+0.1
2,690,648	-		GFF2674	0.15	-0.1
2,690,668	+		GFF2674	0.16	+1.1
2,690,680	+		GFF2674	0.17	+0.6
2,690,680	-		GFF2674	0.17	+0.3
2,690,681	+		GFF2674	0.17	+0.3
2,690,686	+		GFF2674	0.17	-0.6
2,690,694	-		GFF2674	0.17	-0.5
2,690,698	+		GFF2674	0.18	-2.1
2,690,702	+		GFF2674	0.18	+0.3
2,690,710	-		GFF2674	0.18	+1.1
2,690,713	-		GFF2674	0.19	-0.5
2,690,788	+		GFF2674	0.23	-0.0
2,690,788	+		GFF2674	0.23	+0.2
2,690,788	+		GFF2674	0.23	+0.5
2,690,788	+		GFF2674	0.23	-0.2
2,690,788	+		GFF2674	0.23	-0.1
2,690,788	+		GFF2674	0.23	-0.7
2,690,788	+		GFF2674	0.23	+0.6
2,690,788	+		GFF2674	0.23	-0.4
2,690,788	+		GFF2674	0.23	+1.1
2,690,793	+		GFF2674	0.23	-0.1
2,690,793	+		GFF2674	0.23	+0.4
2,690,793	+		GFF2674	0.23	-0.9
2,690,793	+		GFF2674	0.23	+0.5
2,690,793	+		GFF2674	0.23	+0.3
2,690,796	-		GFF2674	0.23	+0.5
2,690,796	-		GFF2674	0.23	-0.9
2,690,796	-		GFF2674	0.23	+0.6
2,690,796	-		GFF2674	0.23	-1.4
2,690,796	-		GFF2674	0.23	-0.4
2,690,796	-		GFF2674	0.23	+0.1
2,690,796	-		GFF2674	0.23	-2.2
2,690,801	-		GFF2674	0.23	+0.1
2,690,801	-		GFF2674	0.23	+0.3
2,690,806	-		GFF2674	0.24	+0.3
2,690,811	+		GFF2674	0.24	-0.3
2,690,833	-		GFF2674	0.25	+0.2
2,690,833	-		GFF2674	0.25	-0.4
2,690,833	-		GFF2674	0.25	-0.4
2,690,835	+		GFF2674	0.25	+0.5
2,690,840	+		GFF2674	0.25	-0.4
2,690,843	-		GFF2674	0.26	-1.0
2,690,843	-		GFF2674	0.26	-0.4
2,690,857	+		GFF2674	0.26	-1.5
2,690,865	+		GFF2674	0.27	-0.6
2,690,867	+		GFF2674	0.27	-1.6
2,690,873	-		GFF2674	0.27	+1.3
2,690,890	+		GFF2674	0.28	-0.0
2,690,895	-		GFF2674	0.28	-1.0
2,690,898	-		GFF2674	0.29	-1.0
2,690,903	+		GFF2674	0.29	-0.1
2,690,910	+		GFF2674	0.29	-3.0
2,690,910	+		GFF2674	0.29	-1.6
2,690,917	-		GFF2674	0.30	-0.6
2,690,917	-		GFF2674	0.30	-0.5
2,690,917	-		GFF2674	0.30	+0.2
2,690,926	+		GFF2674	0.30	-1.9
2,690,926	+		GFF2674	0.30	+1.1
2,690,934	-		GFF2674	0.30	+0.1
2,690,934	-		GFF2674	0.30	-1.6
2,690,934	-		GFF2674	0.30	+1.6
2,690,937	+		GFF2674	0.31	+1.0
2,690,964	+		GFF2674	0.32	-0.2
2,690,964	+		GFF2674	0.32	-1.4
2,690,968	-		GFF2674	0.32	+0.4
2,690,972	-		GFF2674	0.33	+0.4
2,690,972	-		GFF2674	0.33	-0.5
2,690,980	+		GFF2674	0.33	-1.6
2,690,988	-		GFF2674	0.33	-0.8
2,691,004	-		GFF2674	0.34	-2.4
2,691,006	+		GFF2674	0.34	+0.6
2,691,006	+		GFF2674	0.34	+0.6
2,691,014	-		GFF2674	0.35	-1.2
2,691,017	+		GFF2674	0.35	-0.2
2,691,018	+		GFF2674	0.35	+0.1
2,691,018	+		GFF2674	0.35	-0.6
2,691,018	+		GFF2674	0.35	+0.2
2,691,026	-		GFF2674	0.35	+0.1
2,691,027	+		GFF2674	0.35	-0.0
2,691,027	+		GFF2674	0.35	+1.1
2,691,027	+		GFF2674	0.35	-1.2
2,691,029	+		GFF2674	0.36	-0.4
2,691,029	+		GFF2674	0.36	-1.4
2,691,029	+		GFF2674	0.36	+0.3
2,691,029	+		GFF2674	0.36	-1.8
2,691,037	+		GFF2674	0.36	-0.8
2,691,037	-		GFF2674	0.36	+0.0
2,691,037	-		GFF2674	0.36	+0.0
2,691,115	-		GFF2674	0.40	-0.5
2,691,124	+		GFF2674	0.41	-0.2
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