Strain Fitness in Sphingobium sp. HT1-2 around GFF2595

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,610,527	+		GFF2594	0.41	-0.1
2,610,535	-		GFF2594	0.42	-0.8
2,610,540	+		GFF2594	0.42	+0.7
2,610,545	-		GFF2594	0.42	+0.8
2,610,557	+		GFF2594	0.43	-0.5
2,610,557	+		GFF2594	0.43	-0.9
2,610,557	+		GFF2594	0.43	-0.0
2,610,557	+		GFF2594	0.43	-0.3
2,610,557	+		GFF2594	0.43	-0.8
2,610,557	+		GFF2594	0.43	-0.5
2,610,557	+		GFF2594	0.43	-0.0
2,610,565	-		GFF2594	0.43	-1.4
2,610,565	-		GFF2594	0.43	-0.9
2,610,574	+		GFF2594	0.44	+0.2
2,610,583	+		GFF2594	0.44	-0.9
2,610,597	-		GFF2594	0.45	-0.2
2,610,606	+		GFF2594	0.46	+0.2
2,610,613	+		GFF2594	0.46	+0.8
2,610,614	-		GFF2594	0.46	-0.2
2,610,617	+		GFF2594	0.46	-1.0
2,610,625	-		GFF2594	0.47	-0.6
2,610,649	+		GFF2594	0.48	-0.4
2,610,651	+		GFF2594	0.48	-0.9
2,610,654	+		GFF2594	0.49	+0.3
2,610,670	-		GFF2594	0.50	-0.4
2,610,688	+		GFF2594	0.51	-1.2
2,610,697	-		GFF2594	0.51	+1.5
2,610,699	+		GFF2594	0.51	+0.4
2,610,705	-		GFF2594	0.52	-1.2
2,610,732	+		GFF2594	0.53	+0.1
2,610,732	-		GFF2594	0.53	+0.6
2,610,748	+		GFF2594	0.54	-0.2
2,610,757	-		GFF2594	0.55	+0.4
2,610,758	+		GFF2594	0.55	+0.7
2,610,758	+		GFF2594	0.55	-0.4
2,610,782	-		GFF2594	0.56	+0.1
2,610,784	-		GFF2594	0.56	-0.7
2,610,784	-		GFF2594	0.56	+1.6
2,610,785	+		GFF2594	0.56	+1.1
2,610,788	-		GFF2594	0.56	+0.4
2,610,795	+		GFF2594	0.57	+1.1
2,610,805	-		GFF2594	0.57	+0.6
2,610,841	-		GFF2594	0.60	+0.8
2,610,848	+		GFF2594	0.60	+0.3
2,610,848	+		GFF2594	0.60	+2.8
2,610,868	-		GFF2594	0.61	-1.9
2,610,870	+		GFF2594	0.61	+0.2
2,610,870	+		GFF2594	0.61	-2.0
2,610,883	-		GFF2594	0.62	+0.3
2,610,883	-		GFF2594	0.62	-1.7
2,610,883	-		GFF2594	0.62	+1.4
2,610,894	+		GFF2594	0.63	-0.1
2,610,907	-		GFF2594	0.63	-0.2
2,610,916	+		GFF2594	0.64	+1.6
2,610,916	+		GFF2594	0.64	+0.1
2,610,916	+		GFF2594	0.64	-1.0
2,610,916	+		GFF2594	0.64	-0.4
2,610,916	+		GFF2594	0.64	-1.1
2,610,916	+		GFF2594	0.64	-0.4
2,610,916	+		GFF2594	0.64	-1.4
2,610,916	+		GFF2594	0.64	-0.6
2,610,916	+		GFF2594	0.64	+0.2
2,610,919	-		GFF2594	0.64	-0.5
2,610,921	+		GFF2594	0.64	-0.4
2,610,921	+		GFF2594	0.64	-1.5
2,610,924	-		GFF2594	0.64	-2.3
2,610,924	-		GFF2594	0.64	-0.5
2,610,924	-		GFF2594	0.64	-0.9
2,610,924	-		GFF2594	0.64	-0.0
2,610,924	-		GFF2594	0.64	-1.4
2,610,924	-		GFF2594	0.64	-0.5
2,610,924	-		GFF2594	0.64	-0.2
2,610,924	-		GFF2594	0.64	-2.3
2,610,924	-		GFF2594	0.64	-0.6
2,610,924	-		GFF2594	0.64	-3.2
2,610,924	-		GFF2594	0.64	-0.4
2,610,924	-		GFF2594	0.64	-1.7
2,610,924	-		GFF2594	0.64	-0.5
2,610,924	-		GFF2594	0.64	-1.9
2,610,924	-		GFF2594	0.64	-0.9
2,610,924	-		GFF2594	0.64	-0.0
2,610,924	-		GFF2594	0.64	+0.0
2,610,924	-		GFF2594	0.64	-0.2
2,610,929	-		GFF2594	0.65	+0.2
2,610,929	-		GFF2594	0.65	-1.9
2,610,949	+		GFF2594	0.66	-1.4
2,610,949	+		GFF2594	0.66	+0.5
2,610,950	-		GFF2594	0.66	-1.4
2,610,952	-		GFF2594	0.66	+0.6
2,610,997	+		GFF2594	0.69	+0.9
2,611,037	-		GFF2594	0.71	-0.6
2,611,040	+		GFF2594	0.71	+0.3
2,611,040	+		GFF2594	0.71	-1.5
2,611,040	+		GFF2594	0.71	-1.4
2,611,040	+		GFF2594	0.71	-1.6
2,611,045	+		GFF2594	0.72	-0.2
2,611,075	+		GFF2594	0.73	-0.2
2,611,080	+		GFF2594	0.74	-0.9
2,611,089	+		GFF2594	0.74	+1.1
2,611,089	+		GFF2594	0.74	+1.2
2,611,091	+		GFF2594	0.74	-1.0
2,611,091	+		GFF2594	0.74	-1.5
2,611,099	-		GFF2594	0.75	-0.0
2,611,099	-		GFF2594	0.75	-1.7
2,611,117	-		GFF2594	0.76	-0.9
2,611,141	+		GFF2594	0.77	-0.9
2,611,160	-		GFF2594	0.78	+0.1
2,611,175	-		GFF2594	0.79	-3.5
2,611,179	-		GFF2594	0.79	+0.1
2,611,198	+		GFF2594	0.81	-0.5
2,611,198	+		GFF2594	0.81	+1.4
2,611,199	+		GFF2594	0.81	-2.0
2,611,200	+		GFF2594	0.81	-2.5
2,611,206	-		GFF2594	0.81	-2.2
2,611,206	-		GFF2594	0.81	+0.1
2,611,208	+		GFF2594	0.81	-0.4
2,611,221	-		GFF2594	0.82	-0.5
2,611,223	+		GFF2594	0.82	+0.5
2,611,232	+		GFF2594	0.83	-0.5
2,611,240	-		GFF2594	0.83	-0.8
2,611,240	-		GFF2594	0.83	+0.6
2,611,240	-		GFF2594	0.83	-0.2
2,611,240	-		GFF2594	0.83	-1.4
2,611,252	+		GFF2594	0.84	+0.1
2,611,252	+		GFF2594	0.84	-1.7
2,611,260	-		GFF2594	0.84	-0.5
2,611,321	-		GFF2594	0.88	-0.7
2,611,336	-		GFF2594	0.89	-0.9
2,611,343	+		GFF2594	0.89	-0.4
2,611,343	+		GFF2594	0.89	+0.1
2,611,351	-		GFF2594	0.90	-0.4
2,611,362	+				-0.7
2,611,379	+				+0.5
2,611,387	-				-0.5
2,611,392	-				+0.9
2,611,393	+				+0.2
2,611,393	+				-0.1
2,611,393	+				-1.2
2,611,393	+				+0.0
2,611,393	+				-0.9
2,611,393	+				+0.3
2,611,393	-				-0.2
2,611,398	+				+0.6
2,611,398	+				+0.4
2,611,398	+				-0.2
2,611,398	+				-2.4
2,611,398	+				-0.8
2,611,398	+				-1.1
2,611,398	+				+0.1
2,611,401	-				-0.4
2,611,401	-				+0.8
2,611,401	-				+0.1
2,611,401	-				+0.6
2,611,401	-				-1.5
2,611,401	-				-0.5
2,611,401	-				+0.7
2,611,401	-				+0.5
2,611,402	-				+0.6
2,611,406	-				-0.2
2,611,406	-				-0.9
2,611,406	-				+0.2
2,611,406	-				-0.1
2,611,413	-				-0.3
2,611,418	-				+0.1
2,611,423	-				-0.5
2,611,435	-				-0.3
2,611,462	+				+0.1
2,611,467	+				+0.4
2,611,468	+				-0.6
2,611,470	-				-1.2
2,611,472	+				-0.1
2,611,474	+				-0.6
2,611,477	-				-1.0
2,611,503	-				+1.0
2,611,525	+				+0.1
2,611,533	-				+0.6
2,611,550	+				+1.0
2,611,558	-				-0.7
2,611,584	-				-1.5
2,611,588	+				-3.0
2,611,588	+				+0.3
2,611,593	-				-0.6
2,611,596	-				-0.6
2,611,596	-				+0.0
2,611,596	-				-1.3
2,611,603	+				+0.5
2,611,605	+				-0.5
2,611,606	-				-2.3
2,611,611	+				-1.8
2,611,611	-				+0.1
2,611,611	-				+0.2
2,611,638	-		GFF2595	0.12	+1.4
2,611,651	+		GFF2595	0.13	+0.4
2,611,657	+		GFF2595	0.14	-1.2
2,611,689	+		GFF2595	0.17	-0.6
2,611,689	+		GFF2595	0.17	-0.8
2,611,689	+		GFF2595	0.17	+1.1
2,611,689	+		GFF2595	0.17	+0.5
2,611,697	-		GFF2595	0.18	+0.5
2,611,697	-		GFF2595	0.18	+1.0
2,611,697	-		GFF2595	0.18	+0.8
2,611,697	-		GFF2595	0.18	-0.5
2,611,721	+		GFF2595	0.20	-0.1
2,611,721	+		GFF2595	0.20	+0.5
2,611,724	-		GFF2595	0.20	+0.5
2,611,724	-		GFF2595	0.20	-0.0
2,611,730	+		GFF2595	0.21	+1.1
2,611,740	+		GFF2595	0.22	-1.4
2,611,748	-		GFF2595	0.23	-0.9
2,611,776	+		GFF2595	0.26	+0.4
2,611,776	+		GFF2595	0.26	-0.4
2,611,781	-		GFF2595	0.26	-0.2
2,611,784	-		GFF2595	0.26	+1.1
2,611,784	-		GFF2595	0.26	+0.9
2,611,784	-		GFF2595	0.26	+0.2
2,611,791	+		GFF2595	0.27	+1.1
2,611,791	+		GFF2595	0.27	-1.8
2,611,794	-		GFF2595	0.27	+0.6
2,611,799	-		GFF2595	0.28	+0.9
2,611,799	-		GFF2595	0.28	-2.0
2,611,813	+		GFF2595	0.29	-1.6
2,611,818	+		GFF2595	0.30	+0.4
2,611,825	-		GFF2595	0.31	+0.9
2,611,841	+		GFF2595	0.32	-0.5
2,611,849	-		GFF2595	0.33	+1.5
2,611,856	+		GFF2595	0.34	-0.2
2,611,864	+		GFF2595	0.35	-2.1
2,611,866	-		GFF2595	0.35	-1.1
2,611,882	+		GFF2595	0.36	+1.3
2,611,915	+		GFF2595	0.40	-1.4
2,611,915	+		GFF2595	0.40	-0.9
2,611,923	-		GFF2595	0.41	-0.8
2,611,966	+		GFF2595	0.45	-0.7
2,611,974	-		GFF2595	0.46	-0.2
2,612,014	+		GFF2595	0.50	+0.1
2,612,019	+		GFF2595	0.50	-0.1
2,612,019	+		GFF2595	0.50	-0.2
2,612,022	-		GFF2595	0.51	-1.4
2,612,027	-		GFF2595	0.51	+0.2
2,612,027	-		GFF2595	0.51	-0.2
2,612,027	-		GFF2595	0.51	-0.8
2,612,033	-		GFF2595	0.52	-1.6
2,612,043	-		GFF2595	0.53	-0.2
2,612,057	-		GFF2595	0.54	-0.3
2,612,058	+		GFF2595	0.54	-0.7
2,612,058	-		GFF2595	0.54	+0.3
2,612,059	+		GFF2595	0.54	-1.5
2,612,063	+		GFF2595	0.55	-1.3
2,612,071	-		GFF2595	0.56	+1.4
2,612,077	-		GFF2595	0.56	+0.1
2,612,084	+		GFF2595	0.57	-0.8
2,612,089	+		GFF2595	0.57	-1.6
2,612,097	-		GFF2595	0.58	-0.3
2,612,101	-		GFF2595	0.59	-0.5
2,612,126	-		GFF2595	0.61	-0.6
2,612,127	+		GFF2595	0.61	-1.8
2,612,135	-		GFF2595	0.62	+0.7
2,612,145	+		GFF2595	0.63	-0.2
2,612,166	-		GFF2595	0.65	+0.4
2,612,227	-		GFF2595	0.71	-1.4
2,612,230	+		GFF2595	0.72	-0.1
2,612,231	+		GFF2595	0.72	-1.0
2,612,233	-		GFF2595	0.72	+0.2
2,612,236	+		GFF2595	0.72	+0.9
2,612,236	+		GFF2595	0.72	-0.6
2,612,244	-		GFF2595	0.73	-0.2
2,612,256	+		GFF2595	0.74	-0.9
2,612,278	+		GFF2595	0.77	-1.2
2,612,286	-		GFF2595	0.77	-1.1
2,612,316	+		GFF2595	0.80	-0.4
2,612,350	-		GFF2595	0.84	-0.4
2,612,352	+		GFF2595	0.84	-1.0
2,612,356	+		GFF2595	0.85	-0.8
2,612,360	+		GFF2595	0.85	-0.4
2,612,360	-		GFF2595	0.85	-0.1
2,612,368	-		GFF2595	0.86	+1.1
2,612,368	-		GFF2595	0.86	-0.4
2,612,368	-		GFF2595	0.86	-0.0
2,612,373	+		GFF2595	0.86	-0.8
2,612,386	-		GFF2595	0.88	+0.0
2,612,393	+		GFF2595	0.88	-2.0
2,612,393	+		GFF2595	0.88	+1.0
2,612,401	-		GFF2595	0.89	+0.3
2,612,401	-		GFF2595	0.89	-0.8
2,612,411	-				-1.4
2,612,420	+				-0.5
2,612,454	+				+0.0
2,612,460	-				+0.5
2,612,465	-				-1.1
2,612,466	+				-0.3
2,612,491	-				-0.6
2,612,501	-				-0.9
2,612,501	-				-1.5
2,612,504	+				-3.0
2,612,504	+				-0.6
2,612,504	+				-0.6
2,612,504	+				+0.9
2,612,509	+				-1.4
2,612,509	+				-1.4
2,612,511	-				-0.1
2,612,511	-				+0.7
2,612,512	-				+0.1
2,612,512	-				-0.7
2,612,512	-				-2.5
2,612,512	-				-3.2
2,612,517	-				-0.5
2,612,543	-				+1.0
2,612,549	+				+0.9
2,612,562	+				-1.9
2,612,595	+				-1.1
2,612,595	+				-0.9
2,612,644	+				-0.8
2,612,644	+				-0.1
2,612,649	+				+0.2
2,612,660	+				+0.5
2,612,663	+		GFF2596	0.10	-0.0
2,612,663	+		GFF2596	0.10	+0.1
2,612,663	+		GFF2596	0.10	-0.2
2,612,663	+		GFF2596	0.10	+1.2
2,612,663	+		GFF2596	0.10	-2.1
2,612,670	-		GFF2596	0.11	-0.1
2,612,671	-		GFF2596	0.11	+1.2
2,612,671	-		GFF2596	0.11	-0.6
2,612,671	-		GFF2596	0.11	-2.0
2,612,677	-		GFF2596	0.12	+0.2
2,612,731	+		GFF2596	0.16	-0.7
2,612,731	+		GFF2596	0.16	-0.8
2,612,731	+		GFF2596	0.16	-0.2
2,612,731	+		GFF2596	0.16	+0.2
2,612,731	+		GFF2596	0.16	+0.4
2,612,731	+		GFF2596	0.16	+0.2
2,612,739	-		GFF2596	0.17	-0.8
2,612,739	-		GFF2596	0.17	+0.5
2,612,739	-		GFF2596	0.17	-0.9
2,612,739	-		GFF2596	0.17	+0.4
2,612,754	+		GFF2596	0.19	-0.2
2,612,778	+		GFF2596	0.21	+0.2
2,612,800	+		GFF2596	0.23	+0.2
2,612,800	+		GFF2596	0.23	+0.2
2,612,808	+		GFF2596	0.24	-0.3
2,612,808	+		GFF2596	0.24	+0.7
2,612,809	+		GFF2596	0.24	+0.8
2,612,810	+		GFF2596	0.24	+0.0
2,612,810	+		GFF2596	0.24	-0.2
2,612,810	+		GFF2596	0.24	-1.0
2,612,810	+		GFF2596	0.24	+0.5
2,612,810	+		GFF2596	0.24	+0.4
2,612,810	+		GFF2596	0.24	-0.0
2,612,810	+		GFF2596	0.24	-0.4
2,612,810	+		GFF2596	0.24	+0.0
2,612,810	+		GFF2596	0.24	-0.9
2,612,810	+		GFF2596	0.24	+0.0
2,612,810	+		GFF2596	0.24	-0.4
2,612,810	+		GFF2596	0.24	-0.8
2,612,810	+		GFF2596	0.24	-1.3
2,612,810	+		GFF2596	0.24	-0.3
2,612,810	+		GFF2596	0.24	-0.2
2,612,810	+		GFF2596	0.24	+0.1
2,612,810	+		GFF2596	0.24	+1.1
2,612,810	+		GFF2596	0.24	-0.3
2,612,810	+		GFF2596	0.24	-0.7
2,612,810	+		GFF2596	0.24	+0.7
2,612,810	+		GFF2596	0.24	-1.2
2,612,813	-		GFF2596	0.24	-0.5
2,612,816	-		GFF2596	0.24	-0.1
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