Strain Fitness in Sphingobium sp. HT1-2 around GFF2583

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,597,087	-		GFF2581	0.18	+1.2
2,597,106	-		GFF2581	0.20	+0.9
2,597,136	+		GFF2581	0.24	+0.6
2,597,139	-		GFF2581	0.25	+0.2
2,597,157	+		GFF2581	0.27	+1.9
2,597,157	+		GFF2581	0.27	-0.4
2,597,157	+		GFF2581	0.27	+1.4
2,597,157	+		GFF2581	0.27	+0.1
2,597,157	+		GFF2581	0.27	+0.5
2,597,165	-		GFF2581	0.28	+0.6
2,597,165	-		GFF2581	0.28	-0.2
2,597,165	-		GFF2581	0.28	-0.9
2,597,165	-		GFF2581	0.28	-0.9
2,597,165	-		GFF2581	0.28	-0.5
2,597,167	+		GFF2581	0.28	-0.6
2,597,195	+		GFF2581	0.32	-1.5
2,597,195	+		GFF2581	0.32	+0.4
2,597,195	+		GFF2581	0.32	-0.2
2,597,241	+		GFF2581	0.38	+1.3
2,597,243	-		GFF2581	0.38	-1.2
2,597,248	+		GFF2581	0.38	-1.2
2,597,256	-		GFF2581	0.39	+0.7
2,597,294	+		GFF2581	0.44	-0.2
2,597,295	+		GFF2581	0.44	-1.1
2,597,295	+		GFF2581	0.44	+1.5
2,597,295	+		GFF2581	0.44	-0.5
2,597,295	+		GFF2581	0.44	-0.0
2,597,303	-		GFF2581	0.45	-0.9
2,597,303	-		GFF2581	0.45	-0.2
2,597,311	+		GFF2581	0.46	-1.3
2,597,321	+		GFF2581	0.48	-1.5
2,597,321	+		GFF2581	0.48	+0.1
2,597,321	+		GFF2581	0.48	-0.7
2,597,321	+		GFF2581	0.48	+0.7
2,597,321	+		GFF2581	0.48	+0.4
2,597,321	+		GFF2581	0.48	+0.3
2,597,324	-		GFF2581	0.48	-0.1
2,597,329	-		GFF2581	0.49	-0.5
2,597,329	-		GFF2581	0.49	+1.2
2,597,329	-		GFF2581	0.49	+0.3
2,597,329	-		GFF2581	0.49	-0.4
2,597,329	-		GFF2581	0.49	-2.0
2,597,329	-		GFF2581	0.49	+1.2
2,597,329	-		GFF2581	0.49	-1.4
2,597,329	-		GFF2581	0.49	+0.1
2,597,329	-		GFF2581	0.49	-0.3
2,597,329	-		GFF2581	0.49	+0.4
2,597,329	-		GFF2581	0.49	-0.1
2,597,334	-		GFF2581	0.49	+1.0
2,597,339	-		GFF2581	0.50	-0.5
2,597,339	-		GFF2581	0.50	+0.1
2,597,339	-		GFF2581	0.50	+0.9
2,597,351	+		GFF2581	0.51	-1.5
2,597,359	-		GFF2581	0.52	-0.9
2,597,377	+		GFF2581	0.55	-1.1
2,597,403	-		GFF2581	0.58	-1.4
2,597,444	+		GFF2581	0.63	+0.3
2,597,447	-		GFF2581	0.64	-0.4
2,597,449	+		GFF2581	0.64	-1.2
2,597,449	+		GFF2581	0.64	-1.4
2,597,449	+		GFF2581	0.64	+0.3
2,597,452	-		GFF2581	0.64	-0.8
2,597,452	-		GFF2581	0.64	-2.0
2,597,452	-		GFF2581	0.64	+0.9
2,597,452	-		GFF2581	0.64	+0.4
2,597,452	-		GFF2581	0.64	+0.2
2,597,452	-		GFF2581	0.64	+1.2
2,597,457	-		GFF2581	0.65	-2.2
2,597,457	-		GFF2581	0.65	+0.7
2,597,457	-		GFF2581	0.65	+0.4
2,597,457	-		GFF2581	0.65	+0.8
2,597,506	+		GFF2581	0.71	-0.9
2,597,509	-		GFF2581	0.71	+0.5
2,597,514	-		GFF2581	0.72	+1.2
2,597,514	-		GFF2581	0.72	-2.3
2,597,519	-		GFF2581	0.73	-0.6
2,597,519	-		GFF2581	0.73	-0.4
2,597,523	-		GFF2581	0.73	+1.0
2,597,533	-		GFF2581	0.74	-0.2
2,597,537	+		GFF2581	0.75	-1.7
2,597,537	+		GFF2581	0.75	-0.8
2,597,537	+		GFF2581	0.75	-1.6
2,597,537	+		GFF2581	0.75	-0.3
2,597,537	+		GFF2581	0.75	+0.9
2,597,539	+		GFF2581	0.75	+0.7
2,597,545	-		GFF2581	0.76	-1.2
2,597,545	-		GFF2581	0.76	-1.2
2,597,545	-		GFF2581	0.76	+1.1
2,597,547	-		GFF2581	0.76	+0.1
2,597,547	-		GFF2581	0.76	-1.7
2,597,570	+		GFF2581	0.79	-0.4
2,597,573	-		GFF2581	0.79	-0.1
2,597,581	+		GFF2581	0.80	+0.1
2,597,581	+		GFF2581	0.80	-1.8
2,597,581	+		GFF2581	0.80	-0.0
2,597,581	+		GFF2581	0.80	+1.3
2,597,581	+		GFF2581	0.80	-0.5
2,597,581	+		GFF2581	0.80	-0.8
2,597,581	+		GFF2581	0.80	-0.1
2,597,581	+		GFF2581	0.80	+1.0
2,597,581	+		GFF2581	0.80	-0.3
2,597,581	+		GFF2581	0.80	-1.0
2,597,581	+		GFF2581	0.80	-0.4
2,597,581	+		GFF2581	0.80	+0.2
2,597,581	+		GFF2581	0.80	-1.7
2,597,581	+		GFF2581	0.80	+0.1
2,597,581	+		GFF2581	0.80	-1.6
2,597,581	+		GFF2581	0.80	+0.9
2,597,581	+		GFF2581	0.80	-0.9
2,597,581	+		GFF2581	0.80	+0.9
2,597,586	+		GFF2581	0.81	-0.2
2,597,589	-		GFF2581	0.81	-0.8
2,597,589	-		GFF2581	0.81	+0.6
2,597,589	-		GFF2581	0.81	+0.1
2,597,589	-		GFF2581	0.81	-1.0
2,597,589	-		GFF2581	0.81	+1.0
2,597,589	-		GFF2581	0.81	-0.4
2,597,589	-		GFF2581	0.81	-1.5
2,597,589	-		GFF2581	0.81	+0.2
2,597,589	-		GFF2581	0.81	+0.6
2,597,589	-		GFF2581	0.81	-0.1
2,597,594	-		GFF2581	0.82	-1.9
2,597,601	+		GFF2581	0.83	-1.2
2,597,611	+		GFF2581	0.84	+0.2
2,597,619	-		GFF2581	0.85	-0.0
2,597,619	-		GFF2581	0.85	-0.2
2,597,626	+		GFF2581	0.86	-0.1
2,597,629	+		GFF2581	0.86	-0.9
2,597,634	+		GFF2581	0.87	-0.9
2,597,642	-		GFF2581	0.88	+1.0
2,597,642	-		GFF2581	0.88	-0.6
2,597,643	-		GFF2581	0.88	-1.0
2,597,647	-		GFF2581	0.89	-0.5
2,597,650	-		GFF2581	0.89	-0.9
2,597,665	-				-0.6
2,597,682	+				-3.1
2,597,682	+				-0.2
2,597,703	+				+1.2
2,597,719	+				+1.0
2,597,738	-				-0.3
2,597,738	-				+0.1
2,597,738	-				-0.6
2,597,738	-				-2.5
2,597,765	+		GFF2582	0.10	+1.6
2,597,773	-		GFF2582	0.12	+0.4
2,597,781	-		GFF2582	0.15	-1.0
2,597,787	+		GFF2582	0.17	-0.7
2,597,809	+		GFF2582	0.23	-0.2
2,597,817	-		GFF2582	0.26	+0.1
2,597,817	-		GFF2582	0.26	+0.2
2,597,817	-		GFF2582	0.26	+0.2
2,597,817	-		GFF2582	0.26	+1.4
2,597,857	+		GFF2582	0.38	+0.2
2,597,857	+		GFF2582	0.38	+0.5
2,597,857	+		GFF2582	0.38	+0.9
2,597,865	-		GFF2582	0.40	+1.2
2,597,868	+		GFF2582	0.41	-1.7
2,597,868	+		GFF2582	0.41	-2.4
2,597,873	+		GFF2582	0.43	+0.3
2,597,876	-		GFF2582	0.44	-0.6
2,597,876	-		GFF2582	0.44	-0.0
2,597,879	+		GFF2582	0.45	-1.9
2,597,887	-		GFF2582	0.47	-1.1
2,597,899	+		GFF2582	0.51	+1.0
2,597,903	-		GFF2582	0.52	-0.7
2,597,904	+		GFF2582	0.52	-1.6
2,597,906	-		GFF2582	0.53	+0.5
2,597,907	-		GFF2582	0.53	-0.1
2,597,912	-		GFF2582	0.55	+0.2
2,597,922	-		GFF2582	0.58	+0.2
2,597,936	-		GFF2582	0.62	-1.1
2,597,969	+		GFF2582	0.72	+0.6
2,597,978	-		GFF2582	0.75	+1.1
2,597,978	-		GFF2582	0.75	+0.2
2,597,999	+		GFF2582	0.81	+0.1
2,598,020	-		GFF2582	0.87	-1.9
2,598,020	-		GFF2582	0.87	-0.7
2,598,020	-		GFF2582	0.87	-1.1
2,598,020	-		GFF2582	0.87	+0.2
2,598,024	+		GFF2582	0.88	-0.4
2,598,024	+		GFF2582	0.88	+0.5
2,598,024	+		GFF2582	0.88	-0.1
2,598,024	+		GFF2582	0.88	+0.2
2,598,024	+		GFF2582	0.88	+0.2
2,598,024	+		GFF2582	0.88	-0.6
2,598,024	+		GFF2582	0.88	-1.6
2,598,024	+		GFF2582	0.88	-0.4
2,598,029	+				+0.0
2,598,030	-				-0.8
2,598,032	-				+0.9
2,598,032	-				-0.4
2,598,032	-				-0.6
2,598,032	-				-0.7
2,598,032	-				+0.7
2,598,032	-				-0.1
2,598,032	-				-1.8
2,598,032	-				-0.8
2,598,032	-				-0.1
2,598,032	-				-0.2
2,598,032	-				-0.6
2,598,032	-				+1.8
2,598,047	-				+0.0
2,598,049	+				+0.0
2,598,049	+				-0.9
2,598,049	+				-0.1
2,598,049	+				+0.5
2,598,054	+				-1.5
2,598,057	-				-1.7
2,598,057	-				-0.2
2,598,057	-				-1.4
2,598,057	-				-0.3
2,598,057	-				+0.5
2,598,057	-				-0.7
2,598,059	+				-0.2
2,598,104	+				+0.2
2,598,133	-				+0.6
2,598,133	-				+1.0
2,598,160	+				-1.8
2,598,189	+		GFF2583	0.13	-1.7
2,598,201	+		GFF2583	0.14	-0.1
2,598,242	+		GFF2583	0.18	-1.9
2,598,250	-		GFF2583	0.18	+0.2
2,598,250	-		GFF2583	0.18	-1.4
2,598,284	+		GFF2583	0.22	-0.9
2,598,291	-		GFF2583	0.22	-1.2
2,598,312	+		GFF2583	0.24	-0.6
2,598,336	-		GFF2583	0.27	+0.4
2,598,349	-		GFF2583	0.28	-0.9
2,598,378	+		GFF2583	0.31	+1.0
2,598,386	-		GFF2583	0.31	+0.5
2,598,386	-		GFF2583	0.31	-0.5
2,598,399	+		GFF2583	0.33	+0.3
2,598,404	+		GFF2583	0.33	+1.5
2,598,404	+		GFF2583	0.33	-0.5
2,598,404	+		GFF2583	0.33	-1.8
2,598,406	+		GFF2583	0.33	+0.0
2,598,406	-		GFF2583	0.33	-0.4
2,598,412	-		GFF2583	0.34	+0.8
2,598,414	-		GFF2583	0.34	-0.2
2,598,414	-		GFF2583	0.34	-1.6
2,598,455	+		GFF2583	0.38	+0.6
2,598,486	+		GFF2583	0.41	-0.2
2,598,494	-		GFF2583	0.42	+0.4
2,598,501	-		GFF2583	0.42	-0.9
2,598,501	-		GFF2583	0.42	+1.0
2,598,522	-		GFF2583	0.44	-1.2
2,598,522	-		GFF2583	0.44	+0.8
2,598,543	+		GFF2583	0.46	+0.0
2,598,543	+		GFF2583	0.46	-0.1
2,598,554	+		GFF2583	0.48	-0.6
2,598,554	+		GFF2583	0.48	-0.8
2,598,554	+		GFF2583	0.48	-1.0
2,598,554	+		GFF2583	0.48	-0.4
2,598,554	+		GFF2583	0.48	+0.1
2,598,554	+		GFF2583	0.48	+1.0
2,598,554	+		GFF2583	0.48	-0.7
2,598,554	+		GFF2583	0.48	-0.3
2,598,554	+		GFF2583	0.48	+0.7
2,598,554	+		GFF2583	0.48	-2.0
2,598,554	+		GFF2583	0.48	-1.4
2,598,554	+		GFF2583	0.48	-0.4
2,598,554	+		GFF2583	0.48	+0.4
2,598,554	+		GFF2583	0.48	-0.3
2,598,554	+		GFF2583	0.48	+0.4
2,598,562	-		GFF2583	0.48	+0.6
2,598,562	-		GFF2583	0.48	-1.4
2,598,562	-		GFF2583	0.48	-0.4
2,598,562	-		GFF2583	0.48	-0.4
2,598,562	-		GFF2583	0.48	-1.1
2,598,562	-		GFF2583	0.48	+0.6
2,598,562	-		GFF2583	0.48	-0.6
2,598,562	-		GFF2583	0.48	-2.4
2,598,562	-		GFF2583	0.48	-1.7
2,598,562	-		GFF2583	0.48	-1.6
2,598,562	-		GFF2583	0.48	-2.1
2,598,579	+		GFF2583	0.50	+0.9
2,598,580	-		GFF2583	0.50	+0.5
2,598,580	-		GFF2583	0.50	-1.4
2,598,580	-		GFF2583	0.50	+0.1
2,598,602	-		GFF2583	0.52	-0.5
2,598,629	-		GFF2583	0.55	-0.1
2,598,644	+		GFF2583	0.56	+1.3
2,598,646	-		GFF2583	0.56	-0.7
2,598,651	+		GFF2583	0.57	+0.7
2,598,673	+		GFF2583	0.59	+1.0
2,598,677	+		GFF2583	0.59	-0.6
2,598,677	+		GFF2583	0.59	+0.1
2,598,685	-		GFF2583	0.60	-1.8
2,598,741	+		GFF2583	0.65	+0.2
2,598,746	+		GFF2583	0.66	-1.3
2,598,760	-		GFF2583	0.67	-1.7
2,598,762	+		GFF2583	0.67	-0.5
2,598,799	+		GFF2583	0.71	+0.2
2,598,804	+		GFF2583	0.71	+0.9
2,598,841	+		GFF2583	0.75	+0.5
2,598,842	+		GFF2583	0.75	+0.3
2,598,849	-		GFF2583	0.76	+0.0
2,598,849	-		GFF2583	0.76	-0.6
2,598,849	-		GFF2583	0.76	-1.9
2,598,873	-		GFF2583	0.78	-0.9
2,598,887	-		GFF2583	0.79	+1.8
2,598,917	-		GFF2583	0.82	-2.4
2,598,918	-		GFF2583	0.82	-0.4
2,598,924	-		GFF2583	0.83	-1.2
2,598,930	-		GFF2583	0.84	+0.4
2,598,944	+		GFF2583	0.85	-2.6
2,598,944	+		GFF2583	0.85	-1.2
2,598,952	-		GFF2583	0.86	-0.8
2,598,956	+		GFF2583	0.86	-0.9
2,598,962	-		GFF2583	0.87	-1.4
2,598,964	-		GFF2583	0.87	+0.4
2,598,964	-		GFF2583	0.87	+0.2
2,598,964	-		GFF2583	0.87	+0.6
2,598,978	-		GFF2583	0.88	-1.8
2,599,015	+				-0.2
2,599,018	-				-0.4
2,599,025	+				-0.3
2,599,060	+				-1.4
2,599,068	-				+1.4
2,599,094	-				-0.5
2,599,129	+		GFF2584	0.14	+0.1
2,599,131	+		GFF2584	0.16	-1.0
2,599,131	+		GFF2584	0.16	-0.9
2,599,139	-		GFF2584	0.22	-1.0
2,599,139	-		GFF2584	0.22	+0.9
2,599,139	-		GFF2584	0.22	-1.1
2,599,140	+		GFF2584	0.22	+0.5
2,599,147	-		GFF2584	0.28	-1.4
2,599,150	+		GFF2584	0.30	+1.2
2,599,158	+		GFF2584	0.36	-0.1
2,599,158	-		GFF2584	0.36	-0.6
2,599,158	-		GFF2584	0.36	+0.5
2,599,187	-		GFF2584	0.59	-0.9
2,599,205	+		GFF2584	0.73	-1.2
2,599,205	+		GFF2584	0.73	+1.1
2,599,205	+		GFF2584	0.73	-1.2
2,599,205	+		GFF2584	0.73	-0.2
2,599,213	-		GFF2584	0.79	-1.2
2,599,213	-		GFF2584	0.79	-0.4
2,599,218	-		GFF2584	0.83	+0.3
2,599,231	+				+1.0
2,599,231	+				+0.6
2,599,231	+				+1.1
2,599,231	+				-1.9
2,599,231	+				-1.9
2,599,231	+				-0.2
2,599,231	+				-2.5
2,599,231	+				-1.1
2,599,231	+				+0.1
2,599,231	+				-0.9
2,599,233	+				+1.3
2,599,233	+				+1.1
2,599,239	-				-0.2
2,599,239	-				-1.3
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