Strain Fitness in Sphingobium sp. HT1-2 around GFF2325

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,348,997	+		GFF2323	0.61	+0.0
2,349,005	-		GFF2323	0.62	+0.2
2,349,005	-		GFF2323	0.62	-0.7
2,349,023	-		GFF2323	0.64	-0.1
2,349,043	-		GFF2323	0.65	-0.9
2,349,044	+		GFF2323	0.65	-0.6
2,349,054	+		GFF2323	0.66	+1.4
2,349,145	-		GFF2323	0.74	-1.3
2,349,167	+		GFF2323	0.76	-0.8
2,349,169	-		GFF2323	0.76	+1.7
2,349,169	-		GFF2323	0.76	+0.5
2,349,171	+		GFF2323	0.77	+0.0
2,349,179	+		GFF2323	0.77	-1.2
2,349,183	-		GFF2323	0.78	-1.2
2,349,187	-		GFF2323	0.78	+0.7
2,349,194	-		GFF2323	0.79	-0.3
2,349,196	-		GFF2323	0.79	+0.5
2,349,204	-		GFF2323	0.80	-0.3
2,349,204	-		GFF2323	0.80	+0.0
2,349,229	+		GFF2323	0.82	+0.5
2,349,247	+		GFF2323	0.83	-2.9
2,349,247	+		GFF2323	0.83	-0.2
2,349,255	-		GFF2323	0.84	+0.1
2,349,255	-		GFF2323	0.84	+2.0
2,349,277	-		GFF2323	0.86	+0.3
2,349,290	-		GFF2323	0.87	-0.8
2,349,329	+				-0.6
2,349,337	-				+0.6
2,349,363	+				+1.6
2,349,363	+				-1.6
2,349,371	-				-1.8
2,349,387	-				-0.3
2,349,393	-				-1.3
2,349,418	+				-0.8
2,349,424	+				-1.7
2,349,442	+				-0.8
2,349,465	+				-1.3
2,349,465	+				-2.1
2,349,465	+				-0.3
2,349,473	-				-0.0
2,349,473	-				-0.8
2,349,473	-				+0.1
2,349,473	-				-0.6
2,349,473	-				-1.0
2,349,475	-				-0.1
2,349,486	+				-1.5
2,349,513	+		GFF2324	0.10	-1.5
2,349,521	-		GFF2324	0.15	-0.2
2,349,521	-		GFF2324	0.15	-1.3
2,349,521	-		GFF2324	0.15	-1.3
2,349,523	+		GFF2324	0.16	+0.2
2,349,553	-		GFF2324	0.32	+0.3
2,349,553	-		GFF2324	0.32	+0.1
2,349,582	-		GFF2324	0.48	-0.2
2,349,595	+		GFF2324	0.55	-1.0
2,349,596	-		GFF2324	0.56	-0.3
2,349,603	+		GFF2324	0.60	+0.4
2,349,603	+		GFF2324	0.60	+0.2
2,349,603	+		GFF2324	0.60	-1.4
2,349,603	+		GFF2324	0.60	-0.5
2,349,603	+		GFF2324	0.60	-0.4
2,349,603	+		GFF2324	0.60	+0.1
2,349,603	+		GFF2324	0.60	+0.9
2,349,603	+		GFF2324	0.60	-1.3
2,349,603	+		GFF2324	0.60	-0.3
2,349,603	+		GFF2324	0.60	+1.4
2,349,603	+		GFF2324	0.60	+1.2
2,349,603	+		GFF2324	0.60	+0.6
2,349,603	+		GFF2324	0.60	+0.4
2,349,603	+		GFF2324	0.60	-0.9
2,349,603	+		GFF2324	0.60	-1.3
2,349,603	+		GFF2324	0.60	+0.9
2,349,603	+		GFF2324	0.60	+0.9
2,349,603	+		GFF2324	0.60	+0.8
2,349,603	+		GFF2324	0.60	+0.2
2,349,603	+		GFF2324	0.60	-0.6
2,349,603	+		GFF2324	0.60	-1.1
2,349,603	+		GFF2324	0.60	+1.4
2,349,603	+		GFF2324	0.60	-0.9
2,349,603	+		GFF2324	0.60	-1.8
2,349,603	+		GFF2324	0.60	+0.4
2,349,603	+		GFF2324	0.60	+0.1
2,349,603	+		GFF2324	0.60	-1.5
2,349,603	+		GFF2324	0.60	-0.5
2,349,603	+		GFF2324	0.60	-2.6
2,349,603	+		GFF2324	0.60	-0.9
2,349,603	-		GFF2324	0.60	-0.2
2,349,603	-		GFF2324	0.60	-0.5
2,349,609	+		GFF2324	0.63	+1.0
2,349,610	-		GFF2324	0.63	-0.7
2,349,611	-		GFF2324	0.64	-0.4
2,349,611	-		GFF2324	0.64	-1.7
2,349,611	-		GFF2324	0.64	+1.3
2,349,611	-		GFF2324	0.64	-0.6
2,349,611	-		GFF2324	0.64	-1.3
2,349,611	-		GFF2324	0.64	-1.0
2,349,611	-		GFF2324	0.64	-0.4
2,349,611	-		GFF2324	0.64	+0.8
2,349,611	-		GFF2324	0.64	-0.6
2,349,611	-		GFF2324	0.64	+0.5
2,349,611	-		GFF2324	0.64	-0.6
2,349,611	-		GFF2324	0.64	+0.2
2,349,611	-		GFF2324	0.64	+0.7
2,349,611	-		GFF2324	0.64	+0.1
2,349,611	-		GFF2324	0.64	-1.0
2,349,611	-		GFF2324	0.64	+0.2
2,349,611	-		GFF2324	0.64	+0.1
2,349,611	-		GFF2324	0.64	-1.5
2,349,611	-		GFF2324	0.64	+0.1
2,349,611	-		GFF2324	0.64	+0.4
2,349,611	-		GFF2324	0.64	+1.6
2,349,611	-		GFF2324	0.64	-1.7
2,349,611	-		GFF2324	0.64	-2.5
2,349,611	-		GFF2324	0.64	+0.2
2,349,611	-		GFF2324	0.64	-0.5
2,349,611	-		GFF2324	0.64	+1.6
2,349,611	-		GFF2324	0.64	-1.4
2,349,611	-		GFF2324	0.64	-1.5
2,349,611	-		GFF2324	0.64	-0.7
2,349,611	-		GFF2324	0.64	-1.2
2,349,611	-		GFF2324	0.64	+1.1
2,349,611	-		GFF2324	0.64	-0.9
2,349,611	-		GFF2324	0.64	+0.1
2,349,611	-		GFF2324	0.64	-0.2
2,349,611	-		GFF2324	0.64	+0.2
2,349,617	-		GFF2324	0.67	-1.7
2,349,617	-		GFF2324	0.67	+1.1
2,349,619	+		GFF2324	0.68	-2.1
2,349,622	-		GFF2324	0.70	+1.6
2,349,631	+		GFF2324	0.75	-0.0
2,349,633	-		GFF2324	0.76	+0.7
2,349,665	+				-1.3
2,349,706	-				+0.2
2,349,708	+				+1.2
2,349,716	-				-2.0
2,349,716	-				+0.0
2,349,869	-				+0.0
2,349,929	+				+0.5
2,349,929	+				-1.6
2,349,929	+				-0.6
2,349,937	-				+0.5
2,349,937	-				-0.0
2,349,937	-				-0.8
2,349,939	+				+0.1
2,349,945	-				-1.8
2,349,947	-				+0.5
2,349,962	-				-1.8
2,350,013	-		GFF2325	0.11	-0.7
2,350,020	-		GFF2325	0.12	-0.8
2,350,021	+		GFF2325	0.12	+0.7
2,350,021	+		GFF2325	0.12	-0.5
2,350,021	+		GFF2325	0.12	-1.2
2,350,021	+		GFF2325	0.12	-0.8
2,350,021	+		GFF2325	0.12	+0.1
2,350,027	-		GFF2325	0.12	+0.5
2,350,029	+		GFF2325	0.12	-1.5
2,350,029	-		GFF2325	0.12	-0.8
2,350,029	-		GFF2325	0.12	-0.6
2,350,029	-		GFF2325	0.12	-0.5
2,350,029	-		GFF2325	0.12	-0.9
2,350,036	+		GFF2325	0.13	+0.7
2,350,037	-		GFF2325	0.13	-0.8
2,350,040	+		GFF2325	0.14	+0.0
2,350,108	-		GFF2325	0.21	-1.1
2,350,123	+		GFF2325	0.23	+1.0
2,350,125	+		GFF2325	0.23	-2.0
2,350,140	+		GFF2325	0.24	-0.2
2,350,150	+		GFF2325	0.25	-0.3
2,350,150	+		GFF2325	0.25	+0.2
2,350,155	+		GFF2325	0.26	+0.2
2,350,158	-		GFF2325	0.26	-1.1
2,350,172	+		GFF2325	0.28	+0.2
2,350,198	+		GFF2325	0.31	-0.1
2,350,206	-		GFF2325	0.31	-0.8
2,350,206	-		GFF2325	0.31	+0.2
2,350,221	-		GFF2325	0.33	-0.5
2,350,222	+		GFF2325	0.33	+1.0
2,350,238	-		GFF2325	0.35	+0.9
2,350,238	-		GFF2325	0.35	+0.7
2,350,249	+		GFF2325	0.36	-0.5
2,350,249	+		GFF2325	0.36	+0.7
2,350,257	-		GFF2325	0.37	+0.4
2,350,257	-		GFF2325	0.37	+2.0
2,350,284	+		GFF2325	0.40	+0.4
2,350,288	+		GFF2325	0.40	+1.4
2,350,294	+		GFF2325	0.41	+0.9
2,350,296	-		GFF2325	0.41	-0.5
2,350,303	+		GFF2325	0.42	+0.8
2,350,306	-		GFF2325	0.42	-0.8
2,350,306	-		GFF2325	0.42	-0.3
2,350,306	-		GFF2325	0.42	-0.1
2,350,316	-		GFF2325	0.43	+0.6
2,350,363	-		GFF2325	0.48	+0.2
2,350,365	-		GFF2325	0.48	-0.0
2,350,379	+		GFF2325	0.50	-1.7
2,350,383	-		GFF2325	0.50	+0.4
2,350,385	+		GFF2325	0.51	-0.1
2,350,388	-		GFF2325	0.51	-0.5
2,350,393	-		GFF2325	0.51	-2.6
2,350,393	-		GFF2325	0.51	-1.3
2,350,393	-		GFF2325	0.51	+0.4
2,350,418	+		GFF2325	0.54	-0.6
2,350,418	+		GFF2325	0.54	-0.2
2,350,423	+		GFF2325	0.55	+1.2
2,350,423	+		GFF2325	0.55	+0.7
2,350,431	-		GFF2325	0.55	-0.2
2,350,431	-		GFF2325	0.55	-1.2
2,350,441	-		GFF2325	0.57	+0.4
2,350,453	-		GFF2325	0.58	-0.9
2,350,456	+		GFF2325	0.58	+1.8
2,350,485	+		GFF2325	0.61	-1.6
2,350,486	-		GFF2325	0.61	-0.2
2,350,495	-		GFF2325	0.62	-0.7
2,350,495	-		GFF2325	0.62	+0.9
2,350,498	-		GFF2325	0.63	-2.3
2,350,533	-		GFF2325	0.66	-2.0
2,350,533	-		GFF2325	0.66	-1.5
2,350,561	+		GFF2325	0.69	-1.1
2,350,568	+		GFF2325	0.70	+0.8
2,350,568	+		GFF2325	0.70	-0.7
2,350,568	+		GFF2325	0.70	+0.7
2,350,568	+		GFF2325	0.70	+0.4
2,350,568	+		GFF2325	0.70	-1.1
2,350,576	-		GFF2325	0.71	+1.1
2,350,576	-		GFF2325	0.71	+1.2
2,350,576	-		GFF2325	0.71	+0.8
2,350,576	-		GFF2325	0.71	-1.7
2,350,576	-		GFF2325	0.71	+0.2
2,350,576	-		GFF2325	0.71	-2.0
2,350,605	+		GFF2325	0.74	-1.5
2,350,606	-		GFF2325	0.74	-2.3
2,350,614	+		GFF2325	0.75	-0.1
2,350,614	-		GFF2325	0.75	-0.2
2,350,614	-		GFF2325	0.75	+1.1
2,350,616	+		GFF2325	0.75	-1.0
2,350,616	+		GFF2325	0.75	-0.8
2,350,616	+		GFF2325	0.75	-0.4
2,350,676	-		GFF2325	0.82	+0.1
2,350,677	-		GFF2325	0.82	-0.9
2,350,697	+		GFF2325	0.84	-0.6
2,350,704	+		GFF2325	0.85	-1.3
2,350,705	-		GFF2325	0.85	-0.9
2,350,712	-		GFF2325	0.85	-1.6
2,350,712	-		GFF2325	0.85	-0.8
2,350,723	+		GFF2325	0.87	+0.7
2,350,728	-		GFF2325	0.87	-0.4
2,350,760	-				-1.2
2,350,775	+				+0.9
2,350,776	+				+0.8
2,350,783	-				-2.1
2,350,787	+				-0.1
2,350,787	+				+0.4
2,350,804	-				-1.8
2,350,821	-				+0.2
2,350,824	+				+1.2
2,350,824	+				-0.6
2,350,832	-				+1.3
2,350,857	-				-0.1
2,350,862	-				-1.8
2,350,887	+				-0.2
2,350,895	-				+0.1
2,350,895	-				-0.1
2,350,895	-				-0.3
2,350,903	-				-2.2
2,350,909	+				+0.2
2,350,911	+				+0.4
2,350,919	-				-1.4
2,350,935	+				-0.8
2,350,943	-				-1.0
2,350,948	-				-0.5
2,350,950	+				+0.2
2,350,950	+				-0.5
2,350,958	-				-2.1
2,350,962	+				-0.5
2,350,962	+				-0.3
2,350,962	+				+0.2
2,350,962	+				-0.6
2,350,970	-				-1.2
2,350,970	-				+0.1
2,350,998	+				-0.9
2,350,998	+				-1.1
2,351,004	-				-1.9
2,351,006	+				-1.3
2,351,014	+				-1.0
2,351,014	+				+0.1
2,351,022	-				-1.4
2,351,031	-				+1.9
2,351,035	+				-2.8
2,351,042	+				-1.6
2,351,042	-				-0.3
2,351,043	-				-0.7
2,351,050	-				+0.2
2,351,075	+		GFF2326	0.11	+0.7
2,351,096	-		GFF2326	0.12	-2.0
2,351,121	+		GFF2326	0.14	+0.9
2,351,121	+		GFF2326	0.14	-1.8
2,351,131	+		GFF2326	0.14	-1.7
2,351,131	+		GFF2326	0.14	+0.7
2,351,139	-		GFF2326	0.14	-0.4
2,351,139	-		GFF2326	0.14	-1.0
2,351,139	-		GFF2326	0.14	-1.7
2,351,139	-		GFF2326	0.14	+0.9
2,351,153	-		GFF2326	0.15	-1.1
2,351,155	-		GFF2326	0.15	+0.4
2,351,184	-		GFF2326	0.17	-0.7
2,351,213	+		GFF2326	0.18	+0.7
2,351,213	+		GFF2326	0.18	-1.6
2,351,213	+		GFF2326	0.18	+0.2
2,351,221	-		GFF2326	0.19	-1.3
2,351,221	-		GFF2326	0.19	-0.7
2,351,221	-		GFF2326	0.19	-1.3
2,351,221	-		GFF2326	0.19	-1.2
2,351,221	-		GFF2326	0.19	-1.1
2,351,237	+		GFF2326	0.19	-1.4
2,351,238	+		GFF2326	0.19	+0.2
2,351,245	-		GFF2326	0.20	-2.8
2,351,246	-		GFF2326	0.20	+0.7
2,351,246	-		GFF2326	0.20	-0.7
2,351,255	-		GFF2326	0.20	-1.6
2,351,284	+		GFF2326	0.22	-0.6
2,351,285	+		GFF2326	0.22	+0.5
2,351,285	+		GFF2326	0.22	-0.3
2,351,293	-		GFF2326	0.22	-0.5
2,351,337	-		GFF2326	0.24	-0.0
2,351,359	+		GFF2326	0.26	-2.2
2,351,359	+		GFF2326	0.26	+0.7
2,351,359	+		GFF2326	0.26	-1.5
2,351,367	-		GFF2326	0.26	+0.1
2,351,367	-		GFF2326	0.26	+0.2
2,351,367	-		GFF2326	0.26	-1.2
2,351,367	-		GFF2326	0.26	-1.7
2,351,367	-		GFF2326	0.26	-1.3
2,351,367	-		GFF2326	0.26	-0.0
2,351,367	-		GFF2326	0.26	-0.5
2,351,369	-		GFF2326	0.26	-2.8
2,351,374	+		GFF2326	0.26	-0.5
2,351,385	+		GFF2326	0.27	-1.2
2,351,396	+		GFF2326	0.27	-0.9
2,351,396	+		GFF2326	0.27	-0.3
2,351,407	+		GFF2326	0.28	-1.4
2,351,430	+		GFF2326	0.29	-0.7
2,351,430	+		GFF2326	0.29	-0.4
2,351,431	+		GFF2326	0.29	-0.0
2,351,431	+		GFF2326	0.29	-1.8
2,351,431	+		GFF2326	0.29	-2.0
2,351,431	+		GFF2326	0.29	-0.5
2,351,436	+		GFF2326	0.29	+0.5
2,351,438	-		GFF2326	0.29	-0.8
2,351,456	-		GFF2326	0.30	-0.3
2,351,468	+		GFF2326	0.31	-1.8
2,351,471	-		GFF2326	0.31	+0.7
2,351,471	-		GFF2326	0.31	-0.5
2,351,503	+		GFF2326	0.33	-2.9
2,351,509	+		GFF2326	0.33	-0.5
2,351,509	+		GFF2326	0.33	-0.1
2,351,519	+		GFF2326	0.34	-0.1
2,351,519	+		GFF2326	0.34	-0.4
2,351,536	-		GFF2326	0.34	-1.6
2,351,538	+		GFF2326	0.34	-1.5
2,351,538	+		GFF2326	0.34	-0.1
2,351,546	-		GFF2326	0.35	-1.5
2,351,546	-		GFF2326	0.35	-0.3
2,351,559	+		GFF2326	0.36	+0.9
2,351,567	-		GFF2326	0.36	-1.8
2,351,572	-		GFF2326	0.36	-0.6
2,351,583	+		GFF2326	0.37	-0.8
2,351,583	-		GFF2326	0.37	-0.3
2,351,611	+		GFF2326	0.38	-0.1
2,351,619	-		GFF2326	0.39	-1.7
2,351,623	+		GFF2326	0.39	-0.5
2,351,623	+		GFF2326	0.39	+0.4
2,351,628	+		GFF2326	0.39	-0.9
2,351,631	-		GFF2326	0.39	-1.1
2,351,638	+		GFF2326	0.40	-1.5
2,351,641	-		GFF2326	0.40	-0.2
2,351,661	-		GFF2326	0.41	-0.3
2,351,684	-		GFF2326	0.42	-0.7
2,351,690	+		GFF2326	0.42	-1.0
2,351,719	+		GFF2326	0.44	-1.9
2,351,719	+		GFF2326	0.44	-1.1
2,351,719	+		GFF2326	0.44	+0.1
2,351,719	+		GFF2326	0.44	-0.4
2,351,719	+		GFF2326	0.44	-2.0
2,351,719	+		GFF2326	0.44	-0.1
2,351,719	+		GFF2326	0.44	-1.1
2,351,727	-		GFF2326	0.44	-1.3
2,351,745	+		GFF2326	0.45	-1.8
2,351,753	-		GFF2326	0.45	-1.4
2,351,757	+		GFF2326	0.45	-0.7
2,351,766	+		GFF2326	0.46	+1.1