Strain Fitness in Sphingobium sp. HT1-2 around GFF2281

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,306,676	+				-1.4
2,306,676	+				+0.7
2,306,682	-				-0.2
2,306,683	-				+0.2
2,306,684	-				+0.2
2,306,684	-				-1.0
2,306,686	-				-1.3
2,306,707	-				-0.3
2,306,724	-				-1.1
2,306,732	+				-1.7
2,306,740	-				+0.1
2,306,759	-				-1.2
2,306,842	+				+0.7
2,306,850	-				-0.5
2,306,850	-				-1.0
2,306,862	+				+0.1
2,306,863	+				+0.7
2,306,881	+				+0.2
2,306,884	-				-0.7
2,306,901	+				-0.8
2,306,902	+				-1.4
2,306,945	-		GFF2280	0.10	-0.0
2,307,002	+		GFF2280	0.18	-0.6
2,307,003	-		GFF2280	0.19	+0.6
2,307,005	-		GFF2280	0.19	-0.0
2,307,072	+		GFF2280	0.28	+0.5
2,307,072	+		GFF2280	0.28	+0.4
2,307,072	+		GFF2280	0.28	-0.5
2,307,075	-		GFF2280	0.29	+0.3
2,307,632	+				+0.8
2,307,677	-				-0.9
2,307,684	+				+0.3
2,307,684	+				-0.6
2,307,684	+				+0.9
2,307,684	+				-0.4
2,307,684	+				-0.2
2,307,684	+				+0.3
2,307,684	+				+0.8
2,307,684	+				-2.3
2,307,692	-				-1.2
2,307,692	-				-0.6
2,307,692	-				+0.2
2,307,692	-				-0.9
2,307,692	-				+0.0
2,307,700	-				-0.8
2,307,707	+				-0.9
2,307,740	+				-0.2
2,307,747	+				-0.2
2,307,761	-				+0.6
2,307,772	+				-0.1
2,307,792	-		GFF2281	0.12	-1.3
2,307,797	-		GFF2281	0.12	+0.0
2,307,828	-		GFF2281	0.15	+0.4
2,307,880	+		GFF2281	0.20	-0.3
2,307,880	+		GFF2281	0.20	-0.2
2,307,913	+		GFF2281	0.23	-1.8
2,307,913	+		GFF2281	0.23	-1.7
2,307,917	+		GFF2281	0.24	+0.4
2,307,921	-		GFF2281	0.24	-0.8
2,307,921	-		GFF2281	0.24	-0.6
2,307,931	-		GFF2281	0.25	-2.2
2,307,949	-		GFF2281	0.27	+0.5
2,307,953	-		GFF2281	0.27	-2.9
2,307,960	-		GFF2281	0.28	-2.1
2,307,978	-		GFF2281	0.30	+0.4
2,307,991	+		GFF2281	0.31	+0.1
2,307,991	+		GFF2281	0.31	-0.3
2,307,992	-		GFF2281	0.31	-0.2
2,307,994	-		GFF2281	0.31	-1.2
2,308,006	+		GFF2281	0.32	-0.3
2,308,018	-		GFF2281	0.34	-2.1
2,308,024	+		GFF2281	0.34	-2.5
2,308,024	+		GFF2281	0.34	-0.6
2,308,030	+		GFF2281	0.35	-1.3
2,308,032	-		GFF2281	0.35	-0.7
2,308,032	-		GFF2281	0.35	+1.1
2,308,032	-		GFF2281	0.35	+0.1
2,308,032	-		GFF2281	0.35	+0.2
2,308,062	-		GFF2281	0.38	-1.0
2,308,075	-		GFF2281	0.39	-1.8
2,308,103	-		GFF2281	0.42	+0.0
2,308,123	+		GFF2281	0.44	-2.2
2,308,123	+		GFF2281	0.44	-1.7
2,308,138	+		GFF2281	0.45	-0.2
2,308,138	+		GFF2281	0.45	+0.7
2,308,143	+		GFF2281	0.46	-0.2
2,308,143	+		GFF2281	0.46	+1.5
2,308,145	+		GFF2281	0.46	+0.6
2,308,146	-		GFF2281	0.46	+0.2
2,308,146	-		GFF2281	0.46	+0.4
2,308,146	-		GFF2281	0.46	-0.8
2,308,146	-		GFF2281	0.46	+0.3
2,308,151	-		GFF2281	0.47	-0.2
2,308,151	-		GFF2281	0.47	-2.4
2,308,163	+		GFF2281	0.48	-0.9
2,308,175	+		GFF2281	0.49	-0.0
2,308,183	-		GFF2281	0.50	-2.3
2,308,204	+		GFF2281	0.52	-0.8
2,308,204	+		GFF2281	0.52	-1.3
2,308,204	+		GFF2281	0.52	+0.0
2,308,204	+		GFF2281	0.52	+0.3
2,308,204	+		GFF2281	0.52	+0.4
2,308,211	+		GFF2281	0.52	-0.0
2,308,212	+		GFF2281	0.52	-0.1
2,308,212	+		GFF2281	0.52	-1.2
2,308,212	-		GFF2281	0.52	+0.1
2,308,212	-		GFF2281	0.52	-0.1
2,308,212	-		GFF2281	0.52	+0.9
2,308,212	-		GFF2281	0.52	-0.5
2,308,214	-		GFF2281	0.53	-2.2
2,308,219	+		GFF2281	0.53	-1.2
2,308,219	+		GFF2281	0.53	-2.5
2,308,219	+		GFF2281	0.53	-1.7
2,308,219	-		GFF2281	0.53	+0.9
2,308,219	-		GFF2281	0.53	+1.2
2,308,219	-		GFF2281	0.53	+0.3
2,308,227	-		GFF2281	0.54	-0.2
2,308,227	-		GFF2281	0.54	-0.2
2,308,255	-		GFF2281	0.57	-0.1
2,308,255	-		GFF2281	0.57	-1.8
2,308,255	-		GFF2281	0.57	+0.7
2,308,287	+		GFF2281	0.60	-1.7
2,308,287	+		GFF2281	0.60	-1.0
2,308,290	-		GFF2281	0.60	+0.9
2,308,290	-		GFF2281	0.60	-1.2
2,308,291	+		GFF2281	0.60	+0.4
2,308,295	-		GFF2281	0.61	+0.5
2,308,295	-		GFF2281	0.61	+1.3
2,308,295	-		GFF2281	0.61	-1.1
2,308,299	-		GFF2281	0.61	-1.2
2,308,299	-		GFF2281	0.61	+0.5
2,308,299	-		GFF2281	0.61	+0.9
2,308,301	+		GFF2281	0.61	+0.9
2,308,301	+		GFF2281	0.61	-0.7
2,308,319	+		GFF2281	0.63	-1.3
2,308,327	-		GFF2281	0.64	-1.2
2,308,375	-		GFF2281	0.68	-0.7
2,308,385	+		GFF2281	0.69	-0.8
2,308,399	+		GFF2281	0.71	-2.0
2,308,399	+		GFF2281	0.71	+0.2
2,308,401	+		GFF2281	0.71	-0.5
2,308,401	+		GFF2281	0.71	-0.9
2,308,404	+		GFF2281	0.71	+0.5
2,308,409	-		GFF2281	0.72	+0.1
2,308,412	-		GFF2281	0.72	+0.7
2,308,426	+		GFF2281	0.73	-1.6
2,308,432	-		GFF2281	0.74	-1.1
2,308,434	-		GFF2281	0.74	+0.4
2,308,434	-		GFF2281	0.74	-1.0
2,308,439	+		GFF2281	0.75	-1.6
2,308,447	-		GFF2281	0.75	+0.2
2,308,488	+		GFF2281	0.79	-1.2
2,308,491	-		GFF2281	0.80	+0.2
2,308,495	+		GFF2281	0.80	-1.2
2,308,513	-		GFF2281	0.82	+0.4
2,308,514	+		GFF2281	0.82	+0.3
2,308,532	-		GFF2281	0.84	+0.4
2,308,532	-		GFF2281	0.84	-0.3
2,308,551	+		GFF2281	0.85	+0.9
2,308,559	-		GFF2281	0.86	-1.2
2,308,562	+		GFF2281	0.86	-1.6
2,308,569	-		GFF2281	0.87	-1.7
2,308,570	-		GFF2281	0.87	-0.7
2,308,575	-		GFF2281	0.88	+0.8
2,308,585	-		GFF2281	0.89	-1.2
2,308,590	+		GFF2281	0.89	-1.0
2,308,598	+				+0.7
2,308,599	-				-0.9
2,308,613	+				-0.6
2,308,632	+				+0.8
2,308,632	+				+0.9
2,308,632	+				-0.3
2,308,632	-				+0.4
2,308,638	-				+0.0
2,308,654	+				+0.3
2,308,654	+				+0.7
2,308,654	+				+0.3
2,308,654	+				+0.5
2,308,654	+				+0.4
2,308,654	+				+1.3
2,308,654	+				-0.1
2,308,654	+				-3.2
2,308,654	+				+0.1
2,308,655	-				-0.7
2,308,659	+				-0.1
2,308,662	-				-0.5
2,308,662	-				+0.1
2,308,662	-				-0.5
2,308,662	-				-0.1
2,308,662	-				+0.1
2,308,662	-				+0.2
2,308,662	-				-2.3
2,308,662	-				+1.1
2,308,667	-				+1.3
2,308,669	+				-1.0
2,308,669	+				-1.6
2,308,669	+				-1.5
2,308,669	-				+0.4
2,308,677	-				+0.2
2,308,695	-				-0.1
2,308,697	+				-1.2
2,308,700	+				-2.2
2,308,702	+				+0.4
2,308,702	+				-1.2
2,308,702	+				+0.0
2,308,705	-				-0.5
2,308,706	+				-2.2
2,308,710	-				-0.2
2,308,762	+				+0.3
2,308,762	+				+0.5
2,308,762	+				-0.0
2,308,762	+				+0.4
2,308,767	+				+0.1
2,308,767	+				-0.2
2,308,767	+				+0.4
2,308,767	+				-1.3
2,308,772	+				+0.3
2,308,772	+				-1.6
2,308,772	+				-0.5
2,308,772	+				-1.9
2,308,775	-				+0.3
2,308,775	-				+0.7
2,308,780	-				-0.2
2,308,780	-				+0.4
2,308,780	-				-0.1
2,308,780	-				-0.2
2,308,780	-				+0.7
2,308,780	-				-0.0
2,308,780	-				+0.7
2,308,783	+				+0.5
2,308,783	+				-0.2
2,308,796	+				-1.1
2,308,800	+				+0.7
2,308,801	-				+0.1
2,308,808	-		GFF2282	0.11	+0.1
2,308,808	-		GFF2282	0.11	-0.9
2,308,815	+		GFF2282	0.12	-0.7
2,308,815	+		GFF2282	0.12	-1.8
2,308,815	+		GFF2282	0.12	-1.5
2,308,815	+		GFF2282	0.12	-1.0
2,308,815	+		GFF2282	0.12	-0.9
2,308,815	+		GFF2282	0.12	-1.9
2,308,818	-		GFF2282	0.12	-0.2
2,308,820	+		GFF2282	0.12	+1.2
2,308,822	+		GFF2282	0.12	-0.2
2,308,822	+		GFF2282	0.12	-1.7
2,308,822	+		GFF2282	0.12	+0.5
2,308,823	-		GFF2282	0.12	-0.6
2,308,823	-		GFF2282	0.12	-0.5
2,308,823	-		GFF2282	0.12	-0.5
2,308,823	-		GFF2282	0.12	-1.3
2,308,823	-		GFF2282	0.12	-0.0
2,308,828	-		GFF2282	0.13	+1.2
2,308,830	-		GFF2282	0.13	+1.7
2,308,830	-		GFF2282	0.13	+0.7
2,308,830	-		GFF2282	0.13	-0.4
2,308,830	-		GFF2282	0.13	-0.8
2,308,830	-		GFF2282	0.13	-0.8
2,308,830	-		GFF2282	0.13	-0.1
2,308,830	-		GFF2282	0.13	+0.2
2,308,830	-		GFF2282	0.13	-0.7
2,308,830	-		GFF2282	0.13	-2.2
2,308,871	+		GFF2282	0.18	-0.1
2,308,873	+		GFF2282	0.18	+0.7
2,308,886	-		GFF2282	0.20	+0.1
2,308,893	-		GFF2282	0.21	-1.0
2,308,900	-		GFF2282	0.21	+1.2
2,308,926	+		GFF2282	0.24	+0.9
2,308,964	+		GFF2282	0.29	-0.4
2,308,973	+		GFF2282	0.30	-0.3
2,308,974	+		GFF2282	0.30	-0.2
2,308,980	+		GFF2282	0.31	-1.0
2,308,981	-		GFF2282	0.31	+0.6
2,308,982	-		GFF2282	0.31	+0.1
2,308,982	-		GFF2282	0.31	-1.3
2,308,985	+		GFF2282	0.31	-1.5
2,308,986	+		GFF2282	0.31	+0.3
2,308,988	-		GFF2282	0.32	-0.3
2,308,993	-		GFF2282	0.32	-0.7
2,308,995	+		GFF2282	0.32	-2.6
2,309,003	-		GFF2282	0.33	+0.5
2,309,005	+		GFF2282	0.34	-0.2
2,309,005	+		GFF2282	0.34	-1.9
2,309,007	+		GFF2282	0.34	-0.4
2,309,007	+		GFF2282	0.34	+1.7
2,309,007	+		GFF2282	0.34	-0.4
2,309,013	-		GFF2282	0.34	-1.3
2,309,015	+		GFF2282	0.35	-1.0
2,309,015	+		GFF2282	0.35	-0.3
2,309,015	+		GFF2282	0.35	-0.9
2,309,015	+		GFF2282	0.35	+1.2
2,309,015	+		GFF2282	0.35	-3.0
2,309,015	+		GFF2282	0.35	-0.9
2,309,015	+		GFF2282	0.35	+0.3
2,309,015	+		GFF2282	0.35	+0.5
2,309,015	+		GFF2282	0.35	-0.2
2,309,015	+		GFF2282	0.35	-1.3
2,309,015	+		GFF2282	0.35	-0.5
2,309,023	-		GFF2282	0.36	-1.6
2,309,023	-		GFF2282	0.36	-0.5
2,309,023	-		GFF2282	0.36	-0.2
2,309,023	-		GFF2282	0.36	-1.5
2,309,023	-		GFF2282	0.36	-0.3
2,309,023	-		GFF2282	0.36	-1.0
2,309,023	-		GFF2282	0.36	+0.6
2,309,023	-		GFF2282	0.36	+0.2
2,309,023	-		GFF2282	0.36	-0.1
2,309,023	-		GFF2282	0.36	-0.6
2,309,023	-		GFF2282	0.36	+1.4
2,309,023	-		GFF2282	0.36	+1.1
2,309,023	-		GFF2282	0.36	+0.1
2,309,023	-		GFF2282	0.36	-2.1
2,309,023	-		GFF2282	0.36	-0.9
2,309,027	-		GFF2282	0.36	-0.6
2,309,040	+		GFF2282	0.38	+0.2
2,309,040	+		GFF2282	0.38	+0.5
2,309,040	+		GFF2282	0.38	-0.3
2,309,040	+		GFF2282	0.38	-0.5
2,309,040	+		GFF2282	0.38	+0.1
2,309,040	+		GFF2282	0.38	+0.8
2,309,045	+		GFF2282	0.38	+1.5
2,309,048	-		GFF2282	0.39	-1.0
2,309,048	-		GFF2282	0.39	-0.6
2,309,048	-		GFF2282	0.39	-1.6
2,309,048	-		GFF2282	0.39	-0.2
2,309,048	-		GFF2282	0.39	+0.0
2,309,048	-		GFF2282	0.39	+0.2
2,309,052	+		GFF2282	0.39	+0.5
2,309,053	+		GFF2282	0.39	-0.8
2,309,063	+		GFF2282	0.40	-0.2
2,309,063	+		GFF2282	0.40	-0.3
2,309,065	+		GFF2282	0.41	-0.3
2,309,068	+		GFF2282	0.41	+1.7
2,309,071	-		GFF2282	0.41	+0.4
2,309,071	-		GFF2282	0.41	-0.3
2,309,073	+		GFF2282	0.41	+0.2
2,309,087	+		GFF2282	0.43	-1.2
2,309,147	+		GFF2282	0.50	+1.0
2,309,174	+		GFF2282	0.53	+0.2
2,309,174	+		GFF2282	0.53	-0.8
2,309,197	+		GFF2282	0.56	+1.4
2,309,203	-		GFF2282	0.56	-1.1
2,309,236	+		GFF2282	0.60	+1.0
2,309,258	+		GFF2282	0.63	+1.5
2,309,265	-		GFF2282	0.64	-1.2
2,309,269	+		GFF2282	0.64	-0.3
2,309,300	+		GFF2282	0.68	+0.2
2,309,318	-		GFF2282	0.70	-0.4
2,309,336	-		GFF2282	0.72	-0.9
2,309,379	+		GFF2282	0.77	-0.9
2,309,380	+		GFF2282	0.77	-2.3
2,309,380	+		GFF2282	0.77	+0.8
2,309,380	+		GFF2282	0.77	+1.5
2,309,380	+		GFF2282	0.77	-0.2
2,309,380	+		GFF2282	0.77	-0.4
2,309,388	-		GFF2282	0.78	-0.1
2,309,388	-		GFF2282	0.78	-0.8
2,309,388	-		GFF2282	0.78	-0.7
2,309,401	-		GFF2282	0.79	+0.0
2,309,446	+		GFF2282	0.85	+0.3
2,309,455	-		GFF2282	0.86	-0.5
2,309,455	-		GFF2282	0.86	-0.2
2,309,511	+				+0.8
2,309,511	-				+0.4
2,309,524	+				+1.2
2,309,536	+				-1.5
2,309,544	-				-0.0
2,309,544	-				-0.4
2,309,551	+				-0.4
2,309,551	+				-0.1
2,309,555	+				+0.8
2,309,555	+				-1.3
2,309,556	+				+0.2
2,309,557	-				-0.7
2,309,578	+				-0.9
2,309,593	+				-0.6
2,309,596	-				+1.6
2,309,604	-				+0.4
2,309,606	-				-1.3
2,309,610	+				-0.3
2,309,610	+				+0.3
2,309,610	+				+0.2
2,309,617	+				+0.0
2,309,617	-				+0.3
2,309,618	-				-0.7
2,309,625	-				-0.4
2,309,630	+				-0.3
2,309,630	+				-0.7
2,309,632	+				+0.0
2,309,638	-				-1.2
2,309,641	-				+0.3
2,309,689	+				+0.2
2,309,697	-				-0.8
2,309,699	-				-0.3