Strain Fitness in Sphingobium sp. HT1-2 around GFF2241

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,268,373	+		GFF2240	0.32	-0.9
2,268,381	-		GFF2240	0.32	-0.5
2,268,381	-		GFF2240	0.32	+0.2
2,268,403	+		GFF2240	0.34	-0.7
2,268,421	-		GFF2240	0.35	-0.4
2,268,470	-		GFF2240	0.39	+0.4
2,268,521	+		GFF2240	0.42	-0.1
2,268,528	+		GFF2240	0.43	-1.7
2,268,547	+		GFF2240	0.44	-1.8
2,268,549	-		GFF2240	0.44	+1.4
2,268,562	+		GFF2240	0.45	+0.5
2,268,566	+		GFF2240	0.45	-0.8
2,268,570	+		GFF2240	0.46	-0.2
2,268,585	+		GFF2240	0.47	-0.8
2,268,585	+		GFF2240	0.47	-0.4
2,268,585	+		GFF2240	0.47	+0.7
2,268,585	+		GFF2240	0.47	-0.1
2,268,585	-		GFF2240	0.47	+0.4
2,268,585	-		GFF2240	0.47	+0.6
2,268,588	-		GFF2240	0.47	+0.1
2,268,593	-		GFF2240	0.47	-0.1
2,268,593	-		GFF2240	0.47	+0.2
2,268,593	-		GFF2240	0.47	+1.1
2,268,593	-		GFF2240	0.47	+0.1
2,268,593	-		GFF2240	0.47	-1.1
2,268,597	-		GFF2240	0.48	+0.6
2,268,599	+		GFF2240	0.48	+0.1
2,268,599	+		GFF2240	0.48	-0.5
2,268,607	-		GFF2240	0.48	-0.4
2,268,607	-		GFF2240	0.48	-0.6
2,268,607	-		GFF2240	0.48	+0.2
2,268,607	-		GFF2240	0.48	+0.5
2,268,607	-		GFF2240	0.48	-1.6
2,268,607	-		GFF2240	0.48	-1.9
2,268,607	-		GFF2240	0.48	-0.2
2,268,619	+		GFF2240	0.49	-1.8
2,268,627	-		GFF2240	0.50	-1.3
2,268,667	+		GFF2240	0.53	+0.9
2,268,667	+		GFF2240	0.53	-0.5
2,268,667	+		GFF2240	0.53	-0.6
2,268,675	-		GFF2240	0.53	+0.4
2,268,675	-		GFF2240	0.53	+0.0
2,268,675	-		GFF2240	0.53	-0.7
2,268,675	-		GFF2240	0.53	-0.8
2,268,714	-		GFF2240	0.56	+0.7
2,268,715	-		GFF2240	0.56	-1.7
2,268,725	+		GFF2240	0.57	+1.6
2,268,725	+		GFF2240	0.57	-0.8
2,268,728	-		GFF2240	0.57	-0.3
2,268,730	+		GFF2240	0.57	-0.6
2,268,730	+		GFF2240	0.57	-0.4
2,268,730	+		GFF2240	0.57	+1.8
2,268,730	+		GFF2240	0.57	-1.4
2,268,730	+		GFF2240	0.57	+1.1
2,268,730	+		GFF2240	0.57	-0.5
2,268,730	+		GFF2240	0.57	-0.5
2,268,730	+		GFF2240	0.57	+0.9
2,268,730	+		GFF2240	0.57	-1.4
2,268,730	+		GFF2240	0.57	-0.8
2,268,738	-		GFF2240	0.58	+0.1
2,268,738	-		GFF2240	0.58	-0.5
2,268,738	-		GFF2240	0.58	+0.1
2,268,738	-		GFF2240	0.58	-0.1
2,268,763	+		GFF2240	0.59	-0.8
2,268,781	+		GFF2240	0.61	-0.8
2,268,787	+		GFF2240	0.61	-0.7
2,268,792	+		GFF2240	0.61	-0.5
2,268,795	-		GFF2240	0.62	-1.8
2,268,795	-		GFF2240	0.62	-1.8
2,268,831	+		GFF2240	0.64	-0.6
2,268,836	+		GFF2240	0.64	-0.4
2,268,860	+		GFF2240	0.66	-1.2
2,268,868	+		GFF2240	0.67	-0.9
2,268,868	+		GFF2240	0.67	+0.2
2,268,868	+		GFF2240	0.67	+0.1
2,268,873	+		GFF2240	0.67	+0.1
2,268,876	-		GFF2240	0.67	+0.6
2,268,876	-		GFF2240	0.67	-0.1
2,268,876	-		GFF2240	0.67	+0.3
2,268,878	+		GFF2240	0.67	+1.1
2,268,883	+		GFF2240	0.68	+1.5
2,268,887	-		GFF2240	0.68	-0.8
2,268,891	-		GFF2240	0.68	-1.3
2,268,934	-		GFF2240	0.71	-0.9
2,268,944	+		GFF2240	0.72	-0.8
2,268,960	+		GFF2240	0.73	-0.2
2,268,972	+		GFF2240	0.74	-0.5
2,268,974	-		GFF2240	0.74	-0.1
2,268,984	+		GFF2240	0.75	+0.3
2,269,028	-		GFF2240	0.78	+0.1
2,269,030	+		GFF2240	0.78	+0.3
2,269,046	-		GFF2240	0.79	-0.8
2,269,051	-		GFF2240	0.80	+1.6
2,269,055	+		GFF2240	0.80	+0.1
2,269,055	+		GFF2240	0.80	-0.7
2,269,055	+		GFF2240	0.80	-0.2
2,269,056	-		GFF2240	0.80	+0.1
2,269,063	-		GFF2240	0.81	-0.2
2,269,063	-		GFF2240	0.81	-1.2
2,269,063	-		GFF2240	0.81	-0.2
2,269,069	+		GFF2240	0.81	-1.7
2,269,069	+		GFF2240	0.81	-1.2
2,269,069	+		GFF2240	0.81	+0.6
2,269,077	-		GFF2240	0.82	-0.9
2,269,077	-		GFF2240	0.82	+0.6
2,269,079	+		GFF2240	0.82	-1.2
2,269,081	+		GFF2240	0.82	-0.1
2,269,084	-		GFF2240	0.82	-1.0
2,269,089	-		GFF2240	0.82	+0.9
2,269,094	-		GFF2240	0.83	-0.5
2,269,094	-		GFF2240	0.83	-0.2
2,269,099	+		GFF2240	0.83	+0.3
2,269,107	-		GFF2240	0.84	-0.6
2,269,107	-		GFF2240	0.84	-0.1
2,269,125	+		GFF2240	0.85	-0.0
2,269,128	-		GFF2240	0.85	-1.0
2,269,138	+		GFF2240	0.86	+0.3
2,269,138	+		GFF2240	0.86	-0.7
2,269,138	+		GFF2240	0.86	+0.5
2,269,138	+		GFF2240	0.86	-0.7
2,269,138	-		GFF2240	0.86	+0.0
2,269,143	+		GFF2240	0.86	-0.9
2,269,146	-		GFF2240	0.86	-2.9
2,269,146	-		GFF2240	0.86	-0.6
2,269,146	-		GFF2240	0.86	-0.4
2,269,151	-		GFF2240	0.87	-0.8
2,269,159	+		GFF2240	0.87	-1.1
2,269,164	+		GFF2240	0.88	+0.0
2,269,166	-		GFF2240	0.88	-0.3
2,269,206	-				-2.7
2,269,206	-				+0.1
2,269,219	+				-0.2
2,269,229	+				-1.9
2,269,229	+				-0.5
2,269,229	+				+0.1
2,269,229	+				-1.3
2,269,230	+				-0.3
2,269,230	+				-1.0
2,269,237	-				+1.0
2,269,238	-				-0.2
2,269,244	+				-0.2
2,269,244	+				-1.0
2,269,246	+				+0.4
2,269,246	+				-1.4
2,269,246	+				-0.2
2,269,248	-				-1.7
2,269,248	-				-0.5
2,269,254	-				-0.5
2,269,256	+				+0.0
2,269,259	-				-0.3
2,269,296	+				+0.3
2,269,301	+				+0.7
2,269,301	-				-0.1
2,269,309	+				+0.3
2,269,315	+				-0.0
2,269,317	+				+0.6
2,269,351	-				+0.5
2,269,358	-				-0.3
2,269,358	-				-0.3
2,269,358	-				+0.7
2,269,361	+				+0.4
2,269,361	+				-0.4
2,269,364	+				-0.6
2,269,364	+				-0.7
2,269,364	+				+0.3
2,269,364	+				-1.2
2,269,364	+				+0.4
2,269,364	+				-1.9
2,269,372	-				+0.0
2,269,391	-				-0.6
2,269,391	-				-0.1
2,269,398	+				+0.5
2,269,398	+				-1.2
2,269,403	+				-0.4
2,269,406	-				+0.3
2,269,406	-				-0.6
2,269,406	-				-0.9
2,269,411	-				+0.8
2,269,425	+				+0.6
2,269,430	+				-1.5
2,269,433	-				+0.5
2,269,433	-				-0.1
2,269,438	-				-0.6
2,269,438	-				+0.1
2,269,438	-				-0.8
2,269,438	-				+0.8
2,269,448	+		GFF2241	0.10	+0.3
2,269,453	+		GFF2241	0.11	+0.2
2,269,456	-		GFF2241	0.11	-0.0
2,269,456	-		GFF2241	0.11	+0.1
2,269,456	-		GFF2241	0.11	+0.2
2,269,458	+		GFF2241	0.11	-0.2
2,269,458	+		GFF2241	0.11	-1.0
2,269,458	+		GFF2241	0.11	-0.2
2,269,458	+		GFF2241	0.11	-0.4
2,269,458	+		GFF2241	0.11	-1.4
2,269,458	+		GFF2241	0.11	-0.5
2,269,466	+		GFF2241	0.12	-0.4
2,269,466	-		GFF2241	0.12	-0.2
2,269,466	-		GFF2241	0.12	-1.7
2,269,466	-		GFF2241	0.12	+1.1
2,269,466	-		GFF2241	0.12	-0.6
2,269,466	-		GFF2241	0.12	-0.0
2,269,466	-		GFF2241	0.12	-0.4
2,269,474	-		GFF2241	0.13	-2.2
2,269,474	-		GFF2241	0.13	-0.2
2,269,476	+		GFF2241	0.14	+0.2
2,269,482	+		GFF2241	0.14	-0.2
2,269,498	-		GFF2241	0.16	+0.1
2,269,500	+		GFF2241	0.16	-0.2
2,269,503	-		GFF2241	0.17	-0.3
2,269,503	-		GFF2241	0.17	+0.2
2,269,522	-		GFF2241	0.19	-0.4
2,269,538	+		GFF2241	0.21	-1.1
2,269,572	+		GFF2241	0.25	+1.4
2,269,584	+		GFF2241	0.27	-0.1
2,269,586	+		GFF2241	0.27	+0.8
2,269,586	+		GFF2241	0.27	-1.0
2,269,594	-		GFF2241	0.28	+0.0
2,269,617	-		GFF2241	0.31	-1.8
2,269,617	-		GFF2241	0.31	+0.2
2,269,617	-		GFF2241	0.31	-0.1
2,269,628	-		GFF2241	0.32	-0.8
2,269,628	-		GFF2241	0.32	-0.6
2,269,634	+		GFF2241	0.33	-2.4
2,269,642	+		GFF2241	0.34	-1.8
2,269,647	+		GFF2241	0.34	-1.9
2,269,647	+		GFF2241	0.34	-1.8
2,269,647	+		GFF2241	0.34	+1.0
2,269,647	+		GFF2241	0.34	+0.4
2,269,647	+		GFF2241	0.34	-1.0
2,269,647	+		GFF2241	0.34	+0.5
2,269,655	-		GFF2241	0.35	-1.9
2,269,655	-		GFF2241	0.35	-0.5
2,269,655	-		GFF2241	0.35	-0.6
2,269,655	-		GFF2241	0.35	-0.6
2,269,661	+		GFF2241	0.36	-1.4
2,269,675	+		GFF2241	0.38	+0.3
2,269,681	+		GFF2241	0.38	+0.4
2,269,681	+		GFF2241	0.38	-2.4
2,269,681	+		GFF2241	0.38	-2.0
2,269,681	+		GFF2241	0.38	-0.7
2,269,682	+		GFF2241	0.38	+0.5
2,269,689	-		GFF2241	0.39	+0.6
2,269,689	-		GFF2241	0.39	-0.2
2,269,689	-		GFF2241	0.39	+0.2
2,269,689	-		GFF2241	0.39	+1.5
2,269,719	+		GFF2241	0.43	+0.6
2,269,724	+		GFF2241	0.43	-2.3
2,269,728	+		GFF2241	0.44	-0.6
2,269,736	-		GFF2241	0.45	+0.7
2,269,767	+		GFF2241	0.49	+1.3
2,269,767	+		GFF2241	0.49	+0.8
2,269,767	+		GFF2241	0.49	+1.0
2,269,790	-		GFF2241	0.51	-1.0
2,269,793	+		GFF2241	0.52	+0.7
2,269,810	+		GFF2241	0.54	-0.6
2,269,818	+		GFF2241	0.55	+0.1
2,269,823	+		GFF2241	0.55	-0.4
2,269,831	+		GFF2241	0.56	-1.4
2,269,839	+		GFF2241	0.57	-1.7
2,269,839	-		GFF2241	0.57	+0.4
2,269,845	+		GFF2241	0.58	-0.3
2,269,846	+		GFF2241	0.58	+0.6
2,269,855	+		GFF2241	0.59	+0.1
2,269,855	-		GFF2241	0.59	+0.9
2,269,894	-		GFF2241	0.64	-1.1
2,269,920	+		GFF2241	0.67	-0.5
2,269,920	+		GFF2241	0.67	-0.4
2,269,920	+		GFF2241	0.67	+1.3
2,269,920	-		GFF2241	0.67	+0.2
2,269,920	-		GFF2241	0.67	-0.6
2,269,928	-		GFF2241	0.68	-0.5
2,269,935	+		GFF2241	0.69	-1.5
2,269,939	-		GFF2241	0.69	-2.4
2,269,943	-		GFF2241	0.70	+0.5
2,269,963	-		GFF2241	0.72	-0.2
2,269,973	+		GFF2241	0.74	+0.2
2,269,973	-		GFF2241	0.74	+0.5
2,269,973	-		GFF2241	0.74	-0.2
2,269,974	+		GFF2241	0.74	-0.6
2,269,977	-		GFF2241	0.74	+0.1
2,269,982	-		GFF2241	0.75	-0.6
2,269,982	-		GFF2241	0.75	-1.2
2,269,982	-		GFF2241	0.75	-1.4
2,269,993	+		GFF2241	0.76	-0.5
2,270,006	+		GFF2241	0.78	-0.1
2,270,006	+		GFF2241	0.78	+0.7
2,270,014	-		GFF2241	0.79	-0.8
2,270,027	+		GFF2241	0.80	+0.4
2,270,027	+		GFF2241	0.80	-1.3
2,270,035	-		GFF2241	0.81	+1.2
2,270,035	-		GFF2241	0.81	-0.4
2,270,036	-		GFF2241	0.81	-0.1
2,270,076	+		GFF2241	0.86	-0.8
2,270,076	+		GFF2241	0.86	+2.0
2,270,079	-		GFF2241	0.86	+0.4
2,270,084	-		GFF2241	0.87	-2.4
2,270,084	-		GFF2241	0.87	-0.3
2,270,084	-		GFF2241	0.87	+0.3
2,270,084	-		GFF2241	0.87	-2.6
2,270,084	-		GFF2241	0.87	+0.4
2,270,091	+		GFF2241	0.88	-1.6
2,270,091	+		GFF2241	0.88	+0.2
2,270,091	+		GFF2241	0.88	-0.2
2,270,091	+		GFF2241	0.88	-0.3
2,270,091	+		GFF2241	0.88	+0.2
2,270,091	+		GFF2241	0.88	+0.7
2,270,099	-		GFF2241	0.89	-0.0
2,270,123	-				-0.3
2,270,123	-				+0.5
2,270,125	-				-0.4
2,270,125	-				+0.6
2,270,158	-				-0.1
2,270,159	-				-0.9
2,270,193	-				-1.5
2,270,235	+				-1.1
2,270,472	+		GFF2242	0.61	-1.1
2,270,552	+		GFF2242	0.84	-2.7
2,270,560	-		GFF2242	0.86	+1.3
2,270,582	+				-0.2
2,270,591	+				+0.8
2,270,591	+				+0.7
2,270,591	+				+0.1
2,270,596	+				-0.5
2,270,601	+				-0.4
2,270,601	+				+0.6
2,270,601	+				-0.5