Strain Fitness in Sphingobium sp. HT1-2 around GFF1765

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,793,775	-		GFF1764	0.51	-1.3
1,793,827	-		GFF1764	0.56	-1.6
1,793,969	-		GFF1764	0.69	-0.8
1,794,002	-		GFF1764	0.72	-0.4
1,794,041	-		GFF1764	0.76	-1.4
1,794,052	-		GFF1764	0.77	-0.8
1,794,282	-				+0.4
1,794,321	-				-2.5
1,794,339	-				+0.7
1,794,347	+				+0.0
1,794,413	+				+1.0
1,794,417	-				-2.0
1,794,418	+				-0.1
1,794,426	-				-0.7
1,794,431	+				-0.5
1,794,431	+				+0.8
1,794,439	-				-0.7
1,794,444	+				-0.3
1,794,444	+				+0.2
1,794,452	-				-0.0
1,794,498	+				+0.8
1,794,498	+				-0.5
1,794,498	+				+0.7
1,794,506	-				+0.6
1,794,506	-				-1.0
1,794,506	-				+0.1
1,794,516	-				+0.1
1,794,567	-		GFF1765	0.17	+0.5
1,794,645	+		GFF1765	0.32	-0.5
1,794,648	-		GFF1765	0.33	-0.2
1,794,662	+		GFF1765	0.36	+0.5
1,794,670	+		GFF1765	0.37	-1.4
1,794,678	+		GFF1765	0.39	+0.0
1,794,678	-		GFF1765	0.39	-0.3
1,794,678	-		GFF1765	0.39	-0.8
1,794,684	-		GFF1765	0.40	-2.0
1,794,742	+		GFF1765	0.51	-0.6
1,794,742	+		GFF1765	0.51	+0.9
1,794,742	+		GFF1765	0.51	+0.1
1,794,742	+		GFF1765	0.51	-0.3
1,794,742	+		GFF1765	0.51	+0.3
1,794,750	-		GFF1765	0.53	-0.7
1,794,750	-		GFF1765	0.53	-0.2
1,794,750	-		GFF1765	0.53	-1.6
1,794,750	-		GFF1765	0.53	+0.6
1,794,771	+		GFF1765	0.57	-1.2
1,794,776	-		GFF1765	0.58	+0.1
1,794,782	+		GFF1765	0.59	+0.1
1,794,782	+		GFF1765	0.59	-2.2
1,794,791	+		GFF1765	0.61	-0.5
1,794,817	+		GFF1765	0.66	-0.9
1,794,820	-		GFF1765	0.67	+0.1
1,794,820	-		GFF1765	0.67	+0.6
1,794,855	+		GFF1765	0.74	-0.1
1,794,863	-		GFF1765	0.76	-0.5
1,794,863	-		GFF1765	0.76	-2.6
1,794,867	+		GFF1765	0.76	+1.0
1,794,867	+		GFF1765	0.76	-0.8
1,794,867	+		GFF1765	0.76	-1.5
1,794,875	-		GFF1765	0.78	-0.4
1,794,877	+		GFF1765	0.78	-0.4
1,794,880	-		GFF1765	0.79	+0.2
1,794,895	-		GFF1765	0.82	-0.0
1,794,914	-		GFF1765	0.86	+0.8
1,794,949	-				+0.5
1,794,949	-				-1.2
1,794,949	-				-0.6
1,794,977	-				+0.5
1,794,986	+				+0.2
1,794,993	+				-1.9
1,794,996	+				+0.2
1,794,996	+				-1.3
1,794,996	+				-2.3
1,794,996	+				-1.3
1,795,004	-				-0.0
1,795,004	-				-0.2
1,795,026	+				-0.2
1,795,036	-				+1.6
1,795,041	+				+1.4
1,795,048	+				+0.3
1,795,057	+				+0.6
1,795,057	+				-0.1
1,795,057	+				+0.2
1,795,059	+				-0.2
1,795,059	+				-0.1
1,795,059	-				-0.2
1,795,065	-				-3.0
1,795,065	-				+0.8
1,795,065	-				-0.6
1,795,065	-				+0.6
1,795,067	-				-1.6
1,795,067	-				+0.3
1,795,067	-				-1.5
1,795,105	+				-2.2
1,795,105	+				-0.9
1,795,105	+				-1.3
1,795,107	+				+0.8
1,795,107	+				+0.3
1,795,113	+				-0.0
1,795,113	-				+0.4
1,795,113	-				-1.6
1,795,113	-				+0.4
1,795,118	+				+1.2
1,795,118	+				-2.0
1,795,120	-				-0.4
1,795,121	-				-2.3
1,795,121	-				-0.2
1,795,125	+				+0.8
1,795,140	+				-0.7
1,795,168	-				+0.3
1,795,174	+				-1.7
1,795,182	-				+0.7
1,795,182	-				+1.9
1,795,210	+				-0.3
1,795,215	+				+1.1
1,795,215	+				-1.0
1,795,249	+		GFF1766	0.11	+0.7
1,795,257	-		GFF1766	0.12	-0.5
1,795,269	+		GFF1766	0.12	-0.2
1,795,278	-		GFF1766	0.13	-0.0
1,795,329	-		GFF1766	0.15	+1.4
1,795,342	+		GFF1766	0.16	-1.5
1,795,342	-		GFF1766	0.16	+0.3
1,795,345	-		GFF1766	0.16	+1.1
1,795,357	+		GFF1766	0.16	+1.2
1,795,385	-		GFF1766	0.18	+1.9
1,795,396	-		GFF1766	0.18	-2.0
1,795,396	-		GFF1766	0.18	+0.3
1,795,452	+		GFF1766	0.21	-0.8
1,795,452	+		GFF1766	0.21	-0.8
1,795,455	-		GFF1766	0.21	+0.4
1,795,487	-		GFF1766	0.22	-0.2
1,795,489	-		GFF1766	0.22	-1.0
1,795,491	+		GFF1766	0.22	-1.9
1,795,491	+		GFF1766	0.22	-0.4
1,795,496	+		GFF1766	0.23	-0.5
1,795,499	-		GFF1766	0.23	+0.5
1,795,501	+		GFF1766	0.23	-1.4
1,795,509	-		GFF1766	0.23	-0.4
1,795,509	-		GFF1766	0.23	-0.9
1,795,509	-		GFF1766	0.23	-1.2
1,795,516	+		GFF1766	0.24	+0.6
1,795,524	-		GFF1766	0.24	-2.0
1,795,550	-		GFF1766	0.25	+0.1
1,795,556	+		GFF1766	0.25	-1.5
1,795,556	+		GFF1766	0.25	-0.8
1,795,556	+		GFF1766	0.25	+0.3
1,795,556	+		GFF1766	0.25	-2.9
1,795,556	+		GFF1766	0.25	+0.3
1,795,556	+		GFF1766	0.25	-0.0
1,795,556	+		GFF1766	0.25	-1.2
1,795,556	+		GFF1766	0.25	+0.4
1,795,556	+		GFF1766	0.25	-0.6
1,795,561	+		GFF1766	0.26	+0.1
1,795,561	+		GFF1766	0.26	+0.0
1,795,564	+		GFF1766	0.26	-2.8
1,795,564	-		GFF1766	0.26	-0.5
1,795,564	-		GFF1766	0.26	-0.3
1,795,564	-		GFF1766	0.26	+1.8
1,795,564	-		GFF1766	0.26	-2.8
1,795,564	-		GFF1766	0.26	+0.3
1,795,564	-		GFF1766	0.26	-0.0
1,795,564	-		GFF1766	0.26	-0.9
1,795,564	-		GFF1766	0.26	-2.2
1,795,564	-		GFF1766	0.26	+0.6
1,795,569	-		GFF1766	0.26	-0.2
1,795,569	-		GFF1766	0.26	-1.2
1,795,579	+		GFF1766	0.26	+0.7
1,795,583	-		GFF1766	0.27	-0.6
1,795,583	-		GFF1766	0.27	-0.1
1,795,585	+		GFF1766	0.27	+1.4
1,795,587	-		GFF1766	0.27	+0.7
1,795,593	-		GFF1766	0.27	+0.2
1,795,593	-		GFF1766	0.27	-0.5
1,795,596	+		GFF1766	0.27	+0.1
1,795,600	+		GFF1766	0.27	-0.4
1,795,604	-		GFF1766	0.28	+0.8
1,795,606	+		GFF1766	0.28	-0.7
1,795,606	+		GFF1766	0.28	+0.1
1,795,606	+		GFF1766	0.28	+0.5
1,795,614	-		GFF1766	0.28	+1.1
1,795,632	+		GFF1766	0.29	-0.6
1,795,646	-		GFF1766	0.30	-0.1
1,795,646	-		GFF1766	0.30	-1.1
1,795,650	+		GFF1766	0.30	+0.4
1,795,651	-		GFF1766	0.30	-2.1
1,795,656	-		GFF1766	0.30	+0.3
1,795,658	-		GFF1766	0.30	+0.6
1,795,658	-		GFF1766	0.30	-0.2
1,795,675	+		GFF1766	0.31	-0.1
1,795,682	+		GFF1766	0.31	-0.8
1,795,683	+		GFF1766	0.31	+0.4
1,795,690	-		GFF1766	0.32	+1.5
1,795,693	-		GFF1766	0.32	-0.3
1,795,705	-		GFF1766	0.32	-1.3
1,795,707	+		GFF1766	0.32	-2.0
1,795,707	+		GFF1766	0.32	+0.6
1,795,715	-		GFF1766	0.33	+0.3
1,795,715	-		GFF1766	0.33	+1.4
1,795,728	+		GFF1766	0.33	-0.8
1,795,736	-		GFF1766	0.34	-1.0
1,795,736	-		GFF1766	0.34	-1.7
1,795,736	-		GFF1766	0.34	-0.7
1,795,741	-		GFF1766	0.34	-2.3
1,795,759	-		GFF1766	0.35	-1.1
1,795,767	-		GFF1766	0.35	-3.0
1,795,774	+		GFF1766	0.35	-0.4
1,795,790	-		GFF1766	0.36	+1.0
1,795,796	-		GFF1766	0.36	-0.2
1,795,807	+		GFF1766	0.37	+0.4
1,795,807	+		GFF1766	0.37	+0.3
1,795,813	+		GFF1766	0.37	+0.8
1,795,815	-		GFF1766	0.37	-0.6
1,795,815	-		GFF1766	0.37	+1.3
1,795,817	+		GFF1766	0.37	+0.3
1,795,820	-		GFF1766	0.37	-2.1
1,795,820	-		GFF1766	0.37	-0.0
1,795,822	+		GFF1766	0.38	-0.1
1,795,823	+		GFF1766	0.38	-0.4
1,795,825	-		GFF1766	0.38	+0.3
1,795,825	-		GFF1766	0.38	-0.1
1,795,836	-		GFF1766	0.38	-1.8
1,795,860	-		GFF1766	0.39	+1.1
1,795,860	-		GFF1766	0.39	+1.4
1,795,875	-		GFF1766	0.40	+0.5
1,795,882	+		GFF1766	0.40	+0.6
1,795,891	+		GFF1766	0.41	-0.6
1,795,894	-		GFF1766	0.41	+0.2
1,795,908	-		GFF1766	0.41	-0.2
1,795,909	+		GFF1766	0.42	+1.2
1,795,909	+		GFF1766	0.42	+1.0
1,795,910	+		GFF1766	0.42	-1.3
1,795,910	+		GFF1766	0.42	-1.3
1,795,913	-		GFF1766	0.42	+1.9
1,795,917	-		GFF1766	0.42	-0.6
1,795,943	+		GFF1766	0.43	-2.0
1,795,954	+		GFF1766	0.44	+0.1
1,795,962	-		GFF1766	0.44	-1.2
1,795,962	-		GFF1766	0.44	-0.5
1,795,964	+		GFF1766	0.44	+0.1
1,795,969	+		GFF1766	0.44	-1.2
1,795,972	-		GFF1766	0.44	-2.8
1,795,974	+		GFF1766	0.45	+1.0
1,795,977	-		GFF1766	0.45	+0.1
1,795,977	-		GFF1766	0.45	-2.0
1,795,977	-		GFF1766	0.45	-0.0