Strain Fitness in Sphingobium sp. HT1-2 around GFF1736

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,761,827	-		GFF1735	0.27	+0.8
1,761,875	+		GFF1735	0.31	-0.5
1,761,904	-		GFF1735	0.33	+0.3
1,761,919	+		GFF1735	0.34	+0.3
1,761,919	+		GFF1735	0.34	+0.3
1,761,919	+		GFF1735	0.34	+1.0
1,761,922	-		GFF1735	0.34	-0.9
1,761,927	-		GFF1735	0.35	-0.3
1,761,927	-		GFF1735	0.35	-2.4
1,761,927	-		GFF1735	0.35	-0.5
1,761,927	-		GFF1735	0.35	+1.4
1,761,927	-		GFF1735	0.35	-1.3
1,761,927	-		GFF1735	0.35	+0.1
1,761,927	-		GFF1735	0.35	-0.9
1,761,954	-		GFF1735	0.37	+1.7
1,761,955	-		GFF1735	0.37	-0.1
1,762,003	-		GFF1735	0.41	+0.5
1,762,030	+		GFF1735	0.43	-1.2
1,762,039	-		GFF1735	0.44	+1.1
1,762,102	-		GFF1735	0.49	+0.2
1,762,112	-		GFF1735	0.49	-0.4
1,762,112	-		GFF1735	0.49	-2.7
1,762,115	-		GFF1735	0.50	+0.3
1,762,120	-		GFF1735	0.50	+0.8
1,762,122	+		GFF1735	0.50	-1.1
1,762,125	-		GFF1735	0.50	+0.2
1,762,130	-		GFF1735	0.51	-0.3
1,762,175	+		GFF1735	0.54	-0.1
1,762,183	-		GFF1735	0.55	-0.2
1,762,183	-		GFF1735	0.55	-0.8
1,762,208	+		GFF1735	0.57	+0.2
1,762,208	+		GFF1735	0.57	-0.2
1,762,216	-		GFF1735	0.57	-0.2
1,762,222	-		GFF1735	0.58	+0.3
1,762,248	+		GFF1735	0.60	-1.4
1,762,256	-		GFF1735	0.61	-2.1
1,762,265	+		GFF1735	0.61	-1.0
1,762,265	+		GFF1735	0.61	-0.3
1,762,266	+		GFF1735	0.61	-1.0
1,762,266	+		GFF1735	0.61	+1.5
1,762,268	-		GFF1735	0.62	+0.8
1,762,273	-		GFF1735	0.62	+0.5
1,762,273	-		GFF1735	0.62	+0.5
1,762,274	+		GFF1735	0.62	-0.7
1,762,274	-		GFF1735	0.62	-1.4
1,762,274	-		GFF1735	0.62	+1.5
1,762,274	-		GFF1735	0.62	-0.7
1,762,276	+		GFF1735	0.62	+0.2
1,762,281	+		GFF1735	0.63	-1.2
1,762,284	-		GFF1735	0.63	+0.4
1,762,302	+		GFF1735	0.64	+1.3
1,762,319	+		GFF1735	0.65	-1.1
1,762,319	+		GFF1735	0.65	+0.3
1,762,319	+		GFF1735	0.65	+0.5
1,762,319	+		GFF1735	0.65	+0.5
1,762,319	+		GFF1735	0.65	-0.1
1,762,321	+		GFF1735	0.66	-0.1
1,762,322	-		GFF1735	0.66	-1.9
1,762,322	-		GFF1735	0.66	-0.0
1,762,324	+		GFF1735	0.66	-0.2
1,762,327	-		GFF1735	0.66	+0.9
1,762,327	-		GFF1735	0.66	+1.0
1,762,327	-		GFF1735	0.66	-0.2
1,762,327	-		GFF1735	0.66	+1.2
1,762,327	-		GFF1735	0.66	+0.5
1,762,329	-		GFF1735	0.66	+0.3
1,762,332	-		GFF1735	0.67	+1.4
1,762,360	+		GFF1735	0.69	-0.2
1,762,360	+		GFF1735	0.69	-1.7
1,762,367	+		GFF1735	0.69	-1.1
1,762,368	-		GFF1735	0.69	-1.2
1,762,368	-		GFF1735	0.69	+0.0
1,762,368	-		GFF1735	0.69	+0.2
1,762,371	+		GFF1735	0.70	-1.3
1,762,386	-		GFF1735	0.71	-1.6
1,762,386	-		GFF1735	0.71	+0.9
1,762,399	+		GFF1735	0.72	-0.2
1,762,408	+		GFF1735	0.72	-1.4
1,762,408	+		GFF1735	0.72	+0.6
1,762,411	-		GFF1735	0.73	-1.3
1,762,411	-		GFF1735	0.73	+1.6
1,762,413	+		GFF1735	0.73	+1.5
1,762,416	-		GFF1735	0.73	-0.1
1,762,432	+		GFF1735	0.74	-0.1
1,762,437	+		GFF1735	0.75	-0.4
1,762,437	+		GFF1735	0.75	-1.6
1,762,462	+		GFF1735	0.77	-0.2
1,762,467	+		GFF1735	0.77	-1.2
1,762,510	-		GFF1735	0.80	+0.4
1,762,510	-		GFF1735	0.80	-0.7
1,762,522	+		GFF1735	0.81	+0.0
1,762,522	+		GFF1735	0.81	-0.7
1,762,522	+		GFF1735	0.81	+0.5
1,762,522	+		GFF1735	0.81	-0.4
1,762,522	+		GFF1735	0.81	-0.2
1,762,522	+		GFF1735	0.81	-0.5
1,762,522	+		GFF1735	0.81	-0.1
1,762,522	+		GFF1735	0.81	-0.5
1,762,530	-		GFF1735	0.82	-0.6
1,762,530	-		GFF1735	0.82	-0.2
1,762,530	-		GFF1735	0.82	+0.7
1,762,530	-		GFF1735	0.82	+0.7
1,762,530	-		GFF1735	0.82	-0.6
1,762,530	-		GFF1735	0.82	+0.6
1,762,532	-		GFF1735	0.82	+0.6
1,762,546	+		GFF1735	0.83	-1.5
1,762,554	-		GFF1735	0.84	-1.1
1,762,612	+		GFF1735	0.88	+1.2
1,762,637	+				-2.4
1,762,637	+				-0.9
1,762,639	-				-1.2
1,762,656	+				-0.5
1,762,656	+				-0.6
1,762,656	+				-0.8
1,762,664	-				-0.2
1,762,664	-				-0.6
1,762,664	-				-0.7
1,762,664	-				+1.4
1,762,664	-				+0.4
1,762,667	+				+0.0
1,762,694	-				+0.8
1,762,741	+				-0.7
1,762,741	+				-0.4
1,762,741	+				-0.2
1,762,748	-				-1.3
1,762,749	-				-0.2
1,762,749	-				-2.1
1,762,749	-				+0.7
1,762,749	-				-0.9
1,762,749	-				-0.6
1,762,775	-				+0.7
1,762,787	-				-1.1
1,762,787	-				-0.3
1,762,787	-				-0.2
1,762,787	-				-0.6
1,762,790	+				-0.2
1,762,806	+				+0.8
1,762,810	+				+0.5
1,762,819	+				-2.4
1,762,840	-				-2.3
1,762,840	-				-1.1
1,762,890	+				+0.6
1,762,892	-				+0.4
1,762,908	+				+0.3
1,762,918	+		GFF1736	0.11	-0.5
1,762,918	+		GFF1736	0.11	+1.1
1,762,930	+		GFF1736	0.12	-0.9
1,762,965	-		GFF1736	0.16	-1.1
1,762,974	+		GFF1736	0.17	-1.5
1,762,974	+		GFF1736	0.17	+0.0
1,762,974	+		GFF1736	0.17	-0.9
1,762,974	+		GFF1736	0.17	-2.0
1,762,974	+		GFF1736	0.17	-0.2
1,762,976	-		GFF1736	0.17	+0.2
1,762,982	-		GFF1736	0.18	-2.7
1,762,982	-		GFF1736	0.18	-1.5
1,762,982	-		GFF1736	0.18	+0.2
1,763,022	-		GFF1736	0.23	-1.4
1,763,022	-		GFF1736	0.23	+0.9
1,763,080	+		GFF1736	0.29	-1.7
1,763,084	+		GFF1736	0.30	+0.4
1,763,092	-		GFF1736	0.31	+0.7
1,763,092	-		GFF1736	0.31	+0.2
1,763,141	+		GFF1736	0.36	-1.6
1,763,141	+		GFF1736	0.36	-2.1
1,763,144	+		GFF1736	0.37	-0.5
1,763,149	+		GFF1736	0.37	-0.8
1,763,178	+		GFF1736	0.41	+0.7
1,763,179	-		GFF1736	0.41	-2.8
1,763,182	+		GFF1736	0.41	-0.7
1,763,185	-		GFF1736	0.41	-1.1
1,763,187	+		GFF1736	0.42	+0.7
1,763,187	+		GFF1736	0.42	-1.2
1,763,187	+		GFF1736	0.42	+0.0
1,763,187	+		GFF1736	0.42	-1.4
1,763,187	+		GFF1736	0.42	+1.0
1,763,187	+		GFF1736	0.42	-0.8
1,763,190	-		GFF1736	0.42	+0.5
1,763,195	-		GFF1736	0.43	+0.3
1,763,195	-		GFF1736	0.43	-0.7
1,763,197	+		GFF1736	0.43	-1.5
1,763,214	+		GFF1736	0.45	-0.1
1,763,259	+		GFF1736	0.50	+0.3
1,763,259	+		GFF1736	0.50	-2.6
1,763,259	+		GFF1736	0.50	+0.5
1,763,259	+		GFF1736	0.50	-0.1
1,763,267	-		GFF1736	0.51	-1.1
1,763,267	-		GFF1736	0.51	-0.7
1,763,267	-		GFF1736	0.51	-0.2
1,763,267	-		GFF1736	0.51	-0.1
1,763,286	+		GFF1736	0.53	-0.2
1,763,294	-		GFF1736	0.54	-1.4
1,763,309	-		GFF1736	0.56	-0.7
1,763,314	-		GFF1736	0.56	-0.5
1,763,323	+		GFF1736	0.57	-0.7
1,763,372	+		GFF1736	0.63	-0.1
1,763,372	+		GFF1736	0.63	-1.1
1,763,387	-		GFF1736	0.65	+0.3
1,763,388	+		GFF1736	0.65	-0.8
1,763,388	+		GFF1736	0.65	-0.4
1,763,399	-		GFF1736	0.66	-1.3
1,763,421	+		GFF1736	0.69	-1.1
1,763,421	+		GFF1736	0.69	-1.1
1,763,429	+		GFF1736	0.70	-0.7
1,763,429	-		GFF1736	0.70	+1.2
1,763,429	-		GFF1736	0.70	-0.6
1,763,442	-		GFF1736	0.71	-0.1
1,763,457	+		GFF1736	0.73	-0.4
1,763,457	+		GFF1736	0.73	-1.2
1,763,457	+		GFF1736	0.73	-0.7
1,763,457	+		GFF1736	0.73	-2.3
1,763,465	-		GFF1736	0.74	-1.5
1,763,465	-		GFF1736	0.74	+0.1
1,763,465	-		GFF1736	0.74	-2.2
1,763,465	-		GFF1736	0.74	+0.2
1,763,484	+		GFF1736	0.76	-0.1
1,763,489	-		GFF1736	0.76	-0.5
1,763,492	-		GFF1736	0.77	-1.1
1,763,497	-		GFF1736	0.77	-0.3
1,763,503	-		GFF1736	0.78	+0.3
1,763,505	+		GFF1736	0.78	+0.7
1,763,520	-		GFF1736	0.80	-0.2
1,763,547	+		GFF1736	0.83	+0.1
1,763,547	+		GFF1736	0.83	+1.0
1,763,555	-		GFF1736	0.84	+0.7
1,763,555	-		GFF1736	0.84	-1.4
1,763,555	-		GFF1736	0.84	+0.1
1,763,565	-		GFF1736	0.85	+1.3
1,763,570	-		GFF1736	0.86	+0.2
1,763,572	+		GFF1736	0.86	+1.5
1,763,580	-		GFF1736	0.87	-0.5
1,763,589	+		GFF1736	0.88	-0.3
1,763,599	+		GFF1736	0.89	-1.0
1,763,599	+		GFF1736	0.89	+1.3
1,763,601	+		GFF1736	0.89	-0.5
1,763,609	-				-0.9
1,763,630	-				+0.6
1,763,636	-				-0.4
1,763,642	-				-1.7
1,763,668	-				-1.3
1,763,682	-				-0.9
1,763,693	+				-0.4
1,763,693	+				-1.4
1,763,696	-				-0.6
1,763,696	-				-0.1
1,763,696	-				-2.4
1,763,696	-				-1.2
1,763,701	-				-0.3
1,763,701	-				+1.1
1,763,701	-				-0.9
1,763,705	-				+0.0
1,763,707	+				-0.0
1,763,729	+				+0.6
1,763,739	+				-0.2
1,763,739	+				-0.3
1,763,739	+				-1.0
1,763,739	+				-0.4
1,763,739	+				+0.1
1,763,739	+				+0.8
1,763,747	-				-0.3
1,763,747	-				-0.4
1,763,757	+				+0.8
1,763,776	+				-0.5
1,763,784	-				-0.7
1,763,784	-				+1.7
1,763,784	-				+0.3
1,763,784	-				-0.6
1,763,804	+				+1.7
1,763,806	-				-0.2
1,763,810	-				-0.1
1,763,838	+				+0.8
1,763,839	+				-0.5
1,763,841	+				+0.2
1,763,841	+				-0.1
1,763,857	+				-1.2
1,763,872	+				+0.8
1,763,893	+				+0.1
1,763,897	+				-1.1
1,763,897	+				+0.1
1,763,905	-				-0.9
1,763,905	-				+0.0
1,763,905	-				-0.1
1,763,905	-				-0.3
1,763,905	-				+0.2
1,763,916	+				-0.3
1,763,924	-				+0.0
1,763,927	+				+0.5
1,763,936	+				-2.4
1,763,953	+				+0.5
1,763,961	+				-0.1
1,763,961	+				+0.9
1,763,961	+				-0.2
1,763,961	+				-0.2
1,763,969	-				-0.6
1,763,969	-				+0.5
1,763,969	-				-0.1
1,763,969	-				-1.2
1,764,023	+				-1.5
1,764,042	-				-1.5
1,764,063	+		GFF1737	0.11	+0.5
1,764,069	+		GFF1737	0.12	-1.3
1,764,090	-		GFF1737	0.15	+1.2
1,764,106	+		GFF1737	0.17	+1.8
1,764,111	+		GFF1737	0.18	+0.5
1,764,111	+		GFF1737	0.18	-2.4
1,764,118	+		GFF1737	0.18	+0.4
1,764,122	+		GFF1737	0.19	+0.6
1,764,130	-		GFF1737	0.20	-0.4
1,764,130	-		GFF1737	0.20	-0.3
1,764,143	+		GFF1737	0.22	+0.9
1,764,143	+		GFF1737	0.22	-0.8
1,764,151	-		GFF1737	0.23	-0.3
1,764,151	-		GFF1737	0.23	-0.5
1,764,161	-		GFF1737	0.24	-1.5
1,764,161	-		GFF1737	0.24	-0.7
1,764,166	-		GFF1737	0.25	-1.4
1,764,221	-		GFF1737	0.32	-0.1
1,764,221	-		GFF1737	0.32	+0.9
1,764,237	+		GFF1737	0.34	+0.2
1,764,247	+		GFF1737	0.35	-0.1
1,764,289	+		GFF1737	0.40	-0.7
1,764,296	+		GFF1737	0.41	-2.1
1,764,297	-		GFF1737	0.41	-0.7
1,764,300	+		GFF1737	0.42	+0.4
1,764,302	-		GFF1737	0.42	+0.4
1,764,304	+		GFF1737	0.42	-1.5
1,764,306	+		GFF1737	0.43	-0.9
1,764,314	-		GFF1737	0.44	+0.6
1,764,316	+		GFF1737	0.44	-0.2
1,764,324	-		GFF1737	0.45	-0.1
1,764,332	+		GFF1737	0.46	+0.4
1,764,335	-		GFF1737	0.46	-2.6
1,764,340	-		GFF1737	0.47	-2.0
1,764,372	+		GFF1737	0.51	-0.7
1,764,372	+		GFF1737	0.51	+0.2
1,764,372	+		GFF1737	0.51	+1.1
1,764,372	+		GFF1737	0.51	-0.7
1,764,380	-		GFF1737	0.52	-0.8
1,764,380	-		GFF1737	0.52	+0.5
1,764,380	-		GFF1737	0.52	-0.8
1,764,402	+		GFF1737	0.55	-0.1
1,764,409	+		GFF1737	0.56	+0.4
1,764,410	-		GFF1737	0.56	-0.7
1,764,410	-		GFF1737	0.56	+0.2
1,764,410	-		GFF1737	0.56	+0.5
1,764,460	+		GFF1737	0.62	-0.2
1,764,460	+		GFF1737	0.62	+1.1
1,764,460	+		GFF1737	0.62	-1.7
1,764,496	+		GFF1737	0.67	-0.7
1,764,603	-		GFF1737	0.81	-1.0
1,764,603	-		GFF1737	0.81	-0.5
1,764,651	-		GFF1737	0.87	-0.7
1,764,672	+		GFF1737	0.90	-2.0
1,764,672	+		GFF1737	0.90	+0.3
1,764,680	-				-0.5
1,764,687	+				+0.7