Strain Fitness in Sphingobium sp. HT1-2 around GFF1614

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,640,501	-				-0.6
1,640,521	-				-0.3
1,640,533	+				-1.9
1,640,533	-				+0.7
1,640,535	+				+0.4
1,640,541	-				-0.1
1,640,552	+				-0.3
1,640,559	+				+0.6
1,640,567	-				-0.1
1,640,567	-				-1.3
1,640,567	-				-0.7
1,640,567	-				-0.6
1,640,567	-				+1.0
1,640,567	-				-1.2
1,640,567	-				+0.4
1,640,569	+				+1.1
1,640,579	+				-2.0
1,640,619	+				-1.9
1,640,627	-		GFF1613	0.11	+0.4
1,640,627	-		GFF1613	0.11	+0.4
1,640,628	+		GFF1613	0.11	+0.1
1,640,636	-		GFF1613	0.12	-0.5
1,640,636	-		GFF1613	0.12	-0.5
1,640,637	+		GFF1613	0.12	-1.1
1,640,661	+		GFF1613	0.14	+0.1
1,640,666	+		GFF1613	0.15	+0.1
1,640,698	-		GFF1613	0.19	+1.0
1,640,698	-		GFF1613	0.19	-1.0
1,640,698	-		GFF1613	0.19	+0.9
1,640,698	-		GFF1613	0.19	+0.8
1,640,699	-		GFF1613	0.19	-0.8
1,640,706	+		GFF1613	0.20	-1.0
1,640,724	+		GFF1613	0.22	-1.6
1,640,724	+		GFF1613	0.22	-0.3
1,640,724	+		GFF1613	0.22	-0.4
1,640,724	+		GFF1613	0.22	+1.1
1,640,724	+		GFF1613	0.22	-0.6
1,640,732	-		GFF1613	0.23	-0.9
1,640,732	-		GFF1613	0.23	-0.6
1,640,732	-		GFF1613	0.23	+1.0
1,640,759	+		GFF1613	0.26	-1.5
1,640,759	+		GFF1613	0.26	+0.6
1,640,767	-		GFF1613	0.27	+0.4
1,640,790	+		GFF1613	0.29	+0.4
1,640,807	+		GFF1613	0.31	-1.5
1,640,831	-		GFF1613	0.34	+0.2
1,640,852	-		GFF1613	0.36	-0.2
1,640,867	+		GFF1613	0.38	-0.6
1,640,875	-		GFF1613	0.39	+1.0
1,640,881	-		GFF1613	0.39	+1.7
1,640,900	+		GFF1613	0.42	+1.8
1,640,901	+		GFF1613	0.42	+0.1
1,640,901	+		GFF1613	0.42	+0.1
1,640,901	+		GFF1613	0.42	-0.8
1,640,901	+		GFF1613	0.42	+0.4
1,640,901	+		GFF1613	0.42	+0.6
1,640,901	+		GFF1613	0.42	-0.2
1,640,901	+		GFF1613	0.42	+1.2
1,640,901	+		GFF1613	0.42	-0.5
1,640,901	+		GFF1613	0.42	-0.0
1,640,908	-		GFF1613	0.43	-0.2
1,640,909	-		GFF1613	0.43	-0.2
1,640,909	-		GFF1613	0.43	-0.5
1,640,909	-		GFF1613	0.43	-1.1
1,640,909	-		GFF1613	0.43	-0.9
1,640,909	-		GFF1613	0.43	-1.8
1,640,909	-		GFF1613	0.43	+0.7
1,640,909	-		GFF1613	0.43	-1.5
1,640,911	+		GFF1613	0.43	+1.4
1,640,935	+		GFF1613	0.46	-0.1
1,640,938	-		GFF1613	0.46	+0.7
1,640,945	+		GFF1613	0.47	+0.3
1,640,966	+		GFF1613	0.49	-1.8
1,640,971	+		GFF1613	0.50	+0.7
1,640,979	+		GFF1613	0.51	+0.2
1,640,979	+		GFF1613	0.51	-0.5
1,640,979	+		GFF1613	0.51	-0.1
1,640,979	+		GFF1613	0.51	-1.4
1,640,979	+		GFF1613	0.51	+0.6
1,640,979	+		GFF1613	0.51	+0.2
1,640,979	+		GFF1613	0.51	-0.3
1,640,979	+		GFF1613	0.51	-0.6
1,640,979	+		GFF1613	0.51	-1.6
1,640,979	+		GFF1613	0.51	+0.0
1,640,982	+		GFF1613	0.51	+0.4
1,640,987	-		GFF1613	0.52	+0.2
1,640,987	-		GFF1613	0.52	+0.2
1,640,987	-		GFF1613	0.52	-1.5
1,640,987	-		GFF1613	0.52	-0.1
1,640,990	-		GFF1613	0.52	-0.8
1,640,997	+		GFF1613	0.53	+0.6
1,641,028	-		GFF1613	0.56	+0.0
1,641,033	-		GFF1613	0.57	-0.2
1,641,038	-		GFF1613	0.57	-1.2
1,641,038	-		GFF1613	0.57	-0.5
1,641,045	+		GFF1613	0.58	-0.6
1,641,045	+		GFF1613	0.58	+0.4
1,641,048	-		GFF1613	0.58	-0.0
1,641,053	-		GFF1613	0.59	-0.3
1,641,055	+		GFF1613	0.59	-2.5
1,641,055	-		GFF1613	0.59	-1.0
1,641,064	-		GFF1613	0.60	-2.3
1,641,084	+		GFF1613	0.63	+0.7
1,641,084	+		GFF1613	0.63	-0.5
1,641,089	+		GFF1613	0.63	+0.2
1,641,092	+		GFF1613	0.63	-1.5
1,641,092	-		GFF1613	0.63	+1.5
1,641,093	+		GFF1613	0.64	-0.3
1,641,094	+		GFF1613	0.64	-0.5
1,641,094	+		GFF1613	0.64	+0.1
1,641,100	-		GFF1613	0.64	+0.4
1,641,101	-		GFF1613	0.65	-0.2
1,641,135	-		GFF1613	0.68	-0.8
1,641,143	+		GFF1613	0.69	-0.6
1,641,175	+		GFF1613	0.73	+0.4
1,641,201	-		GFF1613	0.76	-1.3
1,641,207	+		GFF1613	0.77	+1.1
1,641,234	+		GFF1613	0.80	+0.6
1,641,237	-		GFF1613	0.80	-0.9
1,641,258	-		GFF1613	0.82	-1.6
1,641,268	+		GFF1613	0.84	+0.0
1,641,307	+		GFF1613	0.88	-0.7
1,641,344	+				-0.6
1,641,348	+				+0.8
1,641,356	-				-1.4
1,641,356	-				-0.4
1,641,367	+				-0.0
1,641,367	+				+1.0
1,641,367	+				+1.2
1,641,367	+				-0.3
1,641,367	+				-0.0
1,641,375	-				-0.6
1,641,375	-				-0.6
1,641,430	+				-0.8
1,641,454	+				+0.4
1,641,458	-				-1.1
1,641,462	+				+0.7
1,641,462	+				-0.8
1,641,470	-				-0.8
1,641,504	-				-0.6
1,641,533	+		GFF1614	0.20	-1.1
1,641,547	+		GFF1614	0.28	-2.4
1,641,555	-		GFF1614	0.33	+0.7
1,641,561	-		GFF1614	0.36	-1.0
1,641,567	-		GFF1614	0.40	+0.4
1,641,577	+		GFF1614	0.45	-0.8
1,641,598	+		GFF1614	0.57	-1.5
1,641,606	-		GFF1614	0.62	+0.2
1,641,615	-		GFF1614	0.67	+0.5
1,641,615	-		GFF1614	0.67	+0.1
1,641,620	-		GFF1614	0.70	+0.4
1,641,678	+				+0.4
1,641,714	-				+0.7
1,641,806	-				+0.1
1,641,857	-				-1.4
1,641,862	-				+1.2
1,641,867	-				+1.4
1,641,867	-				-0.8
1,641,900	+				+0.2
1,641,936	+				+0.4
1,642,019	-				+0.4
1,642,019	-				+1.1
1,642,025	-				-0.8
1,642,025	-				+0.2
1,642,025	-				+0.1
1,642,092	+				+0.3
1,642,100	-				+0.2
1,642,100	-				+1.0
1,642,132	+				-0.2
1,642,132	+				-0.8
1,642,137	+				-0.7
1,642,140	-				-1.4
1,642,140	-				+0.4
1,642,140	-				-0.1
1,642,170	+		GFF1616	0.12	-1.1
1,642,170	+		GFF1616	0.12	-0.6
1,642,179	+		GFF1616	0.13	+0.1
1,642,186	+		GFF1616	0.14	+0.3
1,642,186	+		GFF1616	0.14	-0.9
1,642,186	+		GFF1616	0.14	+0.0
1,642,186	+		GFF1616	0.14	-2.6
1,642,188	+		GFF1616	0.14	+0.2
1,642,188	+		GFF1616	0.14	-1.8
1,642,192	+		GFF1616	0.14	+1.1
1,642,194	-		GFF1616	0.15	-0.8
1,642,194	-		GFF1616	0.15	-0.2
1,642,194	-		GFF1616	0.15	-1.5
1,642,194	-		GFF1616	0.15	-0.2
1,642,194	-		GFF1616	0.15	-1.2
1,642,196	-		GFF1616	0.15	-0.4
1,642,196	-		GFF1616	0.15	-0.6
1,642,206	+		GFF1616	0.16	-1.9
1,642,206	+		GFF1616	0.16	-0.4
1,642,206	+		GFF1616	0.16	-1.5
1,642,206	+		GFF1616	0.16	-0.3
1,642,214	-		GFF1616	0.17	-1.1
1,642,214	-		GFF1616	0.17	+0.1
1,642,214	-		GFF1616	0.17	+0.8
1,642,214	-		GFF1616	0.17	-1.0
1,642,214	-		GFF1616	0.17	-0.5
1,642,214	-		GFF1616	0.17	-0.2
1,642,214	-		GFF1616	0.17	+0.9
1,642,214	-		GFF1616	0.17	+0.2
1,642,243	+		GFF1616	0.19	-0.3
1,642,251	-		GFF1616	0.20	-1.5
1,642,301	-		GFF1616	0.25	+0.5
1,642,310	-		GFF1616	0.26	-0.8
1,642,357	-		GFF1616	0.30	-1.2
1,642,377	-		GFF1616	0.32	+1.4
1,642,403	+		GFF1616	0.35	+0.5
1,642,416	-		GFF1616	0.36	+1.0
1,642,457	-		GFF1616	0.40	-1.8
1,642,461	+		GFF1616	0.40	-1.2
1,642,469	-		GFF1616	0.41	-1.7
1,642,497	+		GFF1616	0.44	+0.5
1,642,516	+		GFF1616	0.46	-0.7
1,642,541	+		GFF1616	0.48	+0.1
1,642,547	-		GFF1616	0.49	-0.1
1,642,565	+		GFF1616	0.50	+0.3
1,642,583	-		GFF1616	0.52	-1.2
1,642,585	+		GFF1616	0.52	-1.3
1,642,591	-		GFF1616	0.53	+0.6
1,642,591	-		GFF1616	0.53	-0.9
1,642,591	-		GFF1616	0.53	-1.8
1,642,593	-		GFF1616	0.53	-0.2
1,642,593	-		GFF1616	0.53	-1.5
1,642,598	+		GFF1616	0.53	+0.9
1,642,605	+		GFF1616	0.54	-0.3
1,642,606	-		GFF1616	0.54	+0.3
1,642,632	+		GFF1616	0.57	-0.3
1,642,664	+		GFF1616	0.60	-0.7