Strain Fitness in Sphingobium sp. HT1-2 around GFF1572

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,598,417	+		GFF1571	0.21	+0.2
1,598,417	+		GFF1571	0.21	-0.5
1,598,417	+		GFF1571	0.21	-1.0
1,598,417	+		GFF1571	0.21	+0.4
1,598,417	+		GFF1571	0.21	-0.1
1,598,425	-		GFF1571	0.21	-0.2
1,598,425	-		GFF1571	0.21	-1.1
1,598,425	-		GFF1571	0.21	-1.2
1,598,444	-		GFF1571	0.23	+0.4
1,598,539	+		GFF1571	0.31	-1.0
1,598,558	-		GFF1571	0.32	-1.1
1,598,570	+		GFF1571	0.33	-1.5
1,598,637	+		GFF1571	0.39	-0.0
1,598,641	+		GFF1571	0.39	+1.3
1,598,641	+		GFF1571	0.39	-1.5
1,598,641	+		GFF1571	0.39	-0.2
1,598,641	+		GFF1571	0.39	-1.0
1,598,649	-		GFF1571	0.40	-1.0
1,598,649	-		GFF1571	0.40	+0.2
1,598,649	-		GFF1571	0.40	-0.5
1,598,667	-		GFF1571	0.41	+0.5
1,598,676	+		GFF1571	0.42	-1.1
1,598,676	+		GFF1571	0.42	-1.9
1,598,676	+		GFF1571	0.42	+0.7
1,598,684	+		GFF1571	0.42	+0.6
1,598,684	-		GFF1571	0.42	+0.5
1,598,707	+		GFF1571	0.44	-0.1
1,598,715	-		GFF1571	0.45	-1.3
1,598,718	+		GFF1571	0.45	+0.4
1,598,718	+		GFF1571	0.45	-0.6
1,598,718	+		GFF1571	0.45	+0.2
1,598,718	+		GFF1571	0.45	-0.3
1,598,718	+		GFF1571	0.45	+0.2
1,598,718	+		GFF1571	0.45	-1.2
1,598,718	+		GFF1571	0.45	-0.8
1,598,718	+		GFF1571	0.45	-0.1
1,598,718	+		GFF1571	0.45	-0.6
1,598,718	+		GFF1571	0.45	+1.1
1,598,721	-		GFF1571	0.45	-0.0
1,598,721	-		GFF1571	0.45	-0.2
1,598,723	+		GFF1571	0.45	+1.0
1,598,726	-		GFF1571	0.46	+0.1
1,598,726	-		GFF1571	0.46	+1.0
1,598,726	-		GFF1571	0.46	-0.7
1,598,726	-		GFF1571	0.46	-1.7
1,598,726	-		GFF1571	0.46	+0.5
1,598,726	-		GFF1571	0.46	+1.0
1,598,726	-		GFF1571	0.46	+1.2
1,598,726	-		GFF1571	0.46	-0.2
1,598,726	-		GFF1571	0.46	-0.1
1,598,726	-		GFF1571	0.46	+0.6
1,598,731	-		GFF1571	0.46	+0.2
1,598,736	-		GFF1571	0.47	-1.4
1,598,790	+		GFF1571	0.51	-2.1
1,598,798	-		GFF1571	0.52	-1.4
1,598,809	-		GFF1571	0.52	-0.1
1,598,836	-		GFF1571	0.55	-1.8
1,598,891	-		GFF1571	0.59	-1.9
1,598,891	-		GFF1571	0.59	-0.8
1,598,900	+		GFF1571	0.60	+0.3
1,598,900	+		GFF1571	0.60	+0.5
1,598,900	+		GFF1571	0.60	+1.2
1,598,900	+		GFF1571	0.60	-1.0
1,598,900	+		GFF1571	0.60	+0.4
1,598,900	+		GFF1571	0.60	+0.7
1,598,908	-		GFF1571	0.60	-0.5
1,598,908	-		GFF1571	0.60	-0.6
1,598,908	-		GFF1571	0.60	-1.3
1,598,908	-		GFF1571	0.60	-1.1
1,598,908	-		GFF1571	0.60	+0.5
1,598,908	-		GFF1571	0.60	-1.9
1,598,908	-		GFF1571	0.60	-1.8
1,598,908	-		GFF1571	0.60	+0.4
1,598,916	+		GFF1571	0.61	-0.9
1,598,924	-		GFF1571	0.62	+0.5
1,598,949	+		GFF1571	0.64	+0.2
1,599,026	+		GFF1571	0.70	+1.7
1,599,034	-		GFF1571	0.71	-1.8
1,599,059	+		GFF1571	0.73	-0.3
1,599,061	+		GFF1571	0.73	-0.7
1,599,067	-		GFF1571	0.73	-1.5
1,599,069	-		GFF1571	0.73	-0.6
1,599,077	-		GFF1571	0.74	+0.6
1,599,112	+		GFF1571	0.77	-1.2
1,599,112	+		GFF1571	0.77	-1.8
1,599,112	+		GFF1571	0.77	+0.2
1,599,112	+		GFF1571	0.77	+0.0
1,599,117	+		GFF1571	0.77	+0.2
1,599,117	+		GFF1571	0.77	-0.9
1,599,117	+		GFF1571	0.77	+0.4
1,599,117	+		GFF1571	0.77	+0.1
1,599,117	+		GFF1571	0.77	+0.1
1,599,117	+		GFF1571	0.77	-0.8
1,599,120	-		GFF1571	0.77	-2.1
1,599,120	-		GFF1571	0.77	-1.5
1,599,122	+		GFF1571	0.78	-1.2
1,599,122	+		GFF1571	0.78	+0.4
1,599,122	+		GFF1571	0.78	+0.0
1,599,122	+		GFF1571	0.78	-0.1
1,599,122	+		GFF1571	0.78	-0.5
1,599,122	+		GFF1571	0.78	+0.2
1,599,125	-		GFF1571	0.78	-0.4
1,599,130	-		GFF1571	0.78	+0.2
1,599,130	-		GFF1571	0.78	+0.9
1,599,130	-		GFF1571	0.78	-1.0
1,599,130	-		GFF1571	0.78	+0.3
1,599,130	-		GFF1571	0.78	-1.2
1,599,140	+		GFF1571	0.79	-0.6
1,599,154	+		GFF1571	0.80	+0.3
1,599,159	+		GFF1571	0.81	-1.8
1,599,183	+		GFF1571	0.83	+0.4
1,599,183	+		GFF1571	0.83	-1.8
1,599,183	+		GFF1571	0.83	+0.4
1,599,191	-		GFF1571	0.83	+0.4
1,599,191	-		GFF1571	0.83	+0.1
1,599,200	+		GFF1571	0.84	+0.8
1,599,234	+		GFF1571	0.87	+0.3
1,599,234	+		GFF1571	0.87	-2.0
1,599,234	+		GFF1571	0.87	-0.6
1,599,242	-		GFF1571	0.87	-1.8
1,599,242	-		GFF1571	0.87	-1.0
1,599,242	-		GFF1571	0.87	+0.2
1,599,242	-		GFF1571	0.87	-2.3
1,599,242	-		GFF1571	0.87	+2.0
1,599,269	+		GFF1571	0.89	-1.0
1,599,277	-				-0.1
1,599,300	-				-1.4
1,599,301	-				-1.2
1,599,303	+				+0.3
1,599,328	+				-2.5
1,599,350	+				-0.7
1,599,350	+				-1.8
1,599,358	-				-0.8
1,599,369	+				+0.0
1,599,422	+				+1.1
1,599,422	+				+1.3
1,599,422	+				-1.0
1,599,430	-				+0.7
1,599,430	-				+0.6
1,599,433	+				-1.9
1,599,441	-				-0.5
1,599,468	+				-0.1
1,599,481	+				-1.7
1,599,481	+				+0.1
1,599,481	+				+1.5
1,599,481	+				-0.5
1,599,481	+				-1.9
1,599,481	+				+0.9
1,599,481	+				-0.5
1,599,481	+				-0.7
1,599,481	+				+1.1
1,599,481	+				-0.4
1,599,481	+				-0.5
1,599,481	+				+0.5
1,599,481	+				-1.1
1,599,481	+				-0.9
1,599,481	+				+0.5
1,599,481	+				-0.4
1,599,481	+				-0.3
1,599,489	+				-0.6
1,599,489	-				+0.1
1,599,489	-				-0.6
1,599,489	-				+0.7
1,599,489	-				-1.7
1,599,489	-				-0.3
1,599,489	-				-1.3
1,599,489	-				+0.7
1,599,489	-				-1.2
1,599,489	-				-1.0
1,599,489	-				-1.3
1,599,489	-				-0.8
1,599,489	-				-1.3
1,599,489	-				+0.8
1,599,489	-				-0.8
1,599,491	+				-0.7
1,599,491	+				-0.6
1,599,498	-				+1.0
1,599,499	-				+0.5
1,599,499	-				-2.1
1,599,499	-				+0.4
1,599,501	+				-1.8
1,599,517	+				+0.5
1,599,525	-				+0.2
1,599,529	+				-0.6
1,599,530	+				-1.6
1,599,538	+				+0.3
1,599,538	+				-0.2
1,599,540	-				-2.0
1,599,555	+				-0.9
1,599,555	+				-0.9
1,599,563	-				-1.1
1,599,563	-				+1.1
1,599,572	+				+0.6
1,599,575	+				-0.6
1,599,575	+				-2.0
1,599,575	+				-1.0
1,599,580	-				-0.3
1,599,580	-				+0.6
1,599,580	-				-0.1
1,599,583	-				+1.5
1,599,593	-				-2.0
1,599,595	+				-1.2
1,599,595	+				+0.3
1,599,595	+				-1.1
1,599,595	+				-1.6
1,599,595	+				-0.1
1,599,600	+				+0.0
1,599,603	-				+0.4
1,599,603	-				-0.1
1,599,603	-				+0.7
1,599,603	-				-1.6
1,599,603	-				-1.4
1,599,603	-				-0.3
1,599,603	-				-1.8
1,599,608	+				+0.4
1,599,608	+				+0.1
1,599,609	+				+0.8
1,599,609	+				-0.1
1,599,627	+				+0.2
1,599,627	+				+0.4
1,599,627	+				-1.7
1,599,627	+				-0.1
1,599,632	+				-1.1
1,599,632	+				+0.4
1,599,632	+				+0.4
1,599,635	-				-0.7
1,599,635	-				-0.8
1,599,640	-		GFF1572	0.10	-1.7
1,599,640	-		GFF1572	0.10	-1.2
1,599,642	+		GFF1572	0.10	-0.5
1,599,669	-		GFF1572	0.11	+0.5
1,599,682	-		GFF1572	0.12	+1.8
1,599,685	-		GFF1572	0.12	+1.2
1,599,707	-		GFF1572	0.13	-0.2
1,599,732	+		GFF1572	0.14	-0.0
1,599,732	+		GFF1572	0.14	-1.4
1,599,742	+		GFF1572	0.14	+0.0
1,599,755	+		GFF1572	0.15	-2.3
1,599,755	+		GFF1572	0.15	+0.1
1,599,784	+		GFF1572	0.16	-2.1
1,599,801	+		GFF1572	0.17	+0.3
1,599,801	+		GFF1572	0.17	-0.0
1,599,809	-		GFF1572	0.17	-0.9
1,599,820	-		GFF1572	0.18	-0.3
1,599,822	+		GFF1572	0.18	-1.3
1,599,822	+		GFF1572	0.18	+0.7
1,599,828	+		GFF1572	0.18	-1.5
1,599,830	-		GFF1572	0.18	-1.3
1,599,830	-		GFF1572	0.18	-1.8
1,599,830	-		GFF1572	0.18	-1.3
1,599,842	-		GFF1572	0.19	+0.1
1,599,851	+		GFF1572	0.19	+0.3
1,599,859	-		GFF1572	0.19	+0.0
1,599,867	+		GFF1572	0.20	+1.1
1,599,870	-		GFF1572	0.20	+0.4
1,599,872	-		GFF1572	0.20	-0.3
1,599,877	-		GFF1572	0.20	+0.7
1,599,913	+		GFF1572	0.22	+0.2
1,599,938	+		GFF1572	0.23	+0.4
1,599,957	-		GFF1572	0.23	-1.6
1,599,966	+		GFF1572	0.24	-1.5
1,599,981	+		GFF1572	0.24	+1.6
1,600,005	+		GFF1572	0.25	-0.5
1,600,009	-		GFF1572	0.26	-1.3
1,600,019	-		GFF1572	0.26	-0.8
1,600,024	-		GFF1572	0.26	-0.1
1,600,057	+		GFF1572	0.28	-0.9
1,600,057	+		GFF1572	0.28	-0.6
1,600,062	+		GFF1572	0.28	-1.0
1,600,062	+		GFF1572	0.28	+0.4
1,600,065	-		GFF1572	0.28	+0.2
1,600,065	-		GFF1572	0.28	-0.1
1,600,076	+		GFF1572	0.28	-0.6
1,600,084	-		GFF1572	0.29	-1.6
1,600,103	-		GFF1572	0.30	-0.9
1,600,110	-		GFF1572	0.30	-1.2
1,600,114	+		GFF1572	0.30	-2.1
1,600,114	+		GFF1572	0.30	+1.2
1,600,115	-		GFF1572	0.30	-0.1
1,600,120	+		GFF1572	0.30	+0.7
1,600,120	+		GFF1572	0.30	+0.3
1,600,120	+		GFF1572	0.30	-2.0
1,600,120	+		GFF1572	0.30	+0.4
1,600,120	+		GFF1572	0.30	-0.7
1,600,120	+		GFF1572	0.30	-0.0
1,600,120	+		GFF1572	0.30	+0.2
1,600,120	+		GFF1572	0.30	-0.7
1,600,120	+		GFF1572	0.30	+0.6
1,600,120	+		GFF1572	0.30	-0.2
1,600,120	+		GFF1572	0.30	+0.5
1,600,120	+		GFF1572	0.30	+0.4
1,600,120	+		GFF1572	0.30	-1.9
1,600,120	+		GFF1572	0.30	+0.1
1,600,120	+		GFF1572	0.30	-0.6
1,600,120	+		GFF1572	0.30	+1.1
1,600,120	+		GFF1572	0.30	+0.1
1,600,120	+		GFF1572	0.30	-1.7
1,600,120	+		GFF1572	0.30	-0.9
1,600,120	+		GFF1572	0.30	-1.3
1,600,120	+		GFF1572	0.30	+0.2
1,600,120	+		GFF1572	0.30	+0.1
1,600,120	+		GFF1572	0.30	-0.9
1,600,120	+		GFF1572	0.30	-0.7
1,600,120	+		GFF1572	0.30	-2.3
1,600,120	+		GFF1572	0.30	+0.0
1,600,120	+		GFF1572	0.30	-1.8
1,600,120	+		GFF1572	0.30	-1.1
1,600,120	+		GFF1572	0.30	-0.7
1,600,120	+		GFF1572	0.30	-1.1
1,600,120	+		GFF1572	0.30	-0.8
1,600,120	+		GFF1572	0.30	-0.5
1,600,128	-		GFF1572	0.31	+0.4
1,600,128	-		GFF1572	0.31	-2.1
1,600,128	-		GFF1572	0.31	+0.7
1,600,128	-		GFF1572	0.31	-0.3
1,600,128	-		GFF1572	0.31	+0.2
1,600,128	-		GFF1572	0.31	-0.1
1,600,128	-		GFF1572	0.31	-0.7
1,600,128	-		GFF1572	0.31	+0.7
1,600,128	-		GFF1572	0.31	-1.8
1,600,128	-		GFF1572	0.31	+0.5
1,600,128	-		GFF1572	0.31	+0.5
1,600,128	-		GFF1572	0.31	-0.0
1,600,128	-		GFF1572	0.31	-1.2
1,600,128	-		GFF1572	0.31	-0.3
1,600,128	-		GFF1572	0.31	+0.1
1,600,128	-		GFF1572	0.31	-1.2
1,600,128	-		GFF1572	0.31	+1.2
1,600,128	-		GFF1572	0.31	-1.9
1,600,128	-		GFF1572	0.31	-2.9
1,600,128	-		GFF1572	0.31	+0.6
1,600,128	-		GFF1572	0.31	+0.4
1,600,128	-		GFF1572	0.31	-0.2
1,600,128	-		GFF1572	0.31	-0.9
1,600,130	+		GFF1572	0.31	+0.7
1,600,133	-		GFF1572	0.31	-0.1
1,600,137	+		GFF1572	0.31	-2.0
1,600,153	-		GFF1572	0.32	-1.6
1,600,165	-		GFF1572	0.32	-0.2
1,600,187	+		GFF1572	0.33	+0.1
1,600,218	+		GFF1572	0.34	-1.8
1,600,228	+		GFF1572	0.35	+0.1
1,600,228	+		GFF1572	0.35	-1.3
1,600,228	+		GFF1572	0.35	-1.8
1,600,228	+		GFF1572	0.35	-1.2
1,600,228	+		GFF1572	0.35	-1.2
1,600,228	+		GFF1572	0.35	-1.3
1,600,228	+		GFF1572	0.35	-0.3
1,600,228	+		GFF1572	0.35	-1.3
1,600,228	+		GFF1572	0.35	+0.4
1,600,228	+		GFF1572	0.35	-1.2
1,600,228	+		GFF1572	0.35	-0.1
1,600,228	+		GFF1572	0.35	-1.0
1,600,228	+		GFF1572	0.35	+1.0
1,600,228	+		GFF1572	0.35	+1.4
1,600,228	+		GFF1572	0.35	+0.6
1,600,228	+		GFF1572	0.35	+0.9
1,600,228	+		GFF1572	0.35	-1.2
1,600,228	+		GFF1572	0.35	-2.5
1,600,228	+		GFF1572	0.35	+0.0
1,600,228	+		GFF1572	0.35	+0.4
1,600,228	+		GFF1572	0.35	+0.2
1,600,228	+		GFF1572	0.35	+0.1
1,600,228	+		GFF1572	0.35	+0.1
1,600,228	+		GFF1572	0.35	-0.9
1,600,228	+		GFF1572	0.35	+0.4
1,600,228	+		GFF1572	0.35	+0.4
1,600,228	+		GFF1572	0.35	+0.3
1,600,230	+		GFF1572	0.35	+0.4
1,600,230	+		GFF1572	0.35	-1.5
1,600,230	+		GFF1572	0.35	-0.6
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1,600,238	-		GFF1572	0.35	-0.9
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