Strain Fitness in Sphingobium sp. HT1-2 around GFF1503

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,530,824	-		GFF1502	0.18	-0.7
1,530,879	+		GFF1502	0.23	+0.2
1,530,879	+		GFF1502	0.23	-0.4
1,530,882	-		GFF1502	0.23	-1.3
1,530,887	-		GFF1502	0.24	+0.6
1,530,908	-		GFF1502	0.25	+0.2
1,530,920	+		GFF1502	0.26	-2.6
1,530,923	-		GFF1502	0.27	-1.5
1,530,928	-		GFF1502	0.27	+0.2
1,530,939	+		GFF1502	0.28	-1.6
1,530,947	-		GFF1502	0.28	+1.4
1,530,947	-		GFF1502	0.28	-0.6
1,530,988	+		GFF1502	0.32	+1.0
1,530,988	+		GFF1502	0.32	+0.9
1,530,988	+		GFF1502	0.32	+0.4
1,530,988	+		GFF1502	0.32	+0.3
1,530,996	-		GFF1502	0.32	-0.3
1,530,996	-		GFF1502	0.32	-1.9
1,531,001	-		GFF1502	0.33	+0.8
1,531,011	-		GFF1502	0.34	+0.6
1,531,011	-		GFF1502	0.34	-0.8
1,531,013	+		GFF1502	0.34	-0.3
1,531,021	-		GFF1502	0.34	+0.7
1,531,029	+		GFF1502	0.35	-0.6
1,531,035	+		GFF1502	0.36	+0.5
1,531,078	-		GFF1502	0.39	-1.1
1,531,089	+		GFF1502	0.40	-0.4
1,531,094	-		GFF1502	0.40	+0.6
1,531,102	+		GFF1502	0.41	-0.9
1,531,122	-		GFF1502	0.43	-1.1
1,531,192	-		GFF1502	0.48	+0.6
1,531,192	-		GFF1502	0.48	+0.4
1,531,192	-		GFF1502	0.48	-0.4
1,531,232	-		GFF1502	0.52	-0.6
1,531,235	+		GFF1502	0.52	+0.2
1,531,243	-		GFF1502	0.53	+1.3
1,531,252	+		GFF1502	0.53	+0.5
1,531,252	+		GFF1502	0.53	+0.5
1,531,257	+		GFF1502	0.54	-0.6
1,531,257	+		GFF1502	0.54	-0.6
1,531,260	-		GFF1502	0.54	-0.1
1,531,260	-		GFF1502	0.54	+0.0
1,531,260	-		GFF1502	0.54	-1.5
1,531,262	+		GFF1502	0.54	+0.7
1,531,265	-		GFF1502	0.54	-1.1
1,531,265	-		GFF1502	0.54	-0.5
1,531,267	+		GFF1502	0.54	-1.3
1,531,270	-		GFF1502	0.55	+1.0
1,531,295	-		GFF1502	0.57	+0.4
1,531,295	-		GFF1502	0.57	+0.2
1,531,305	+		GFF1502	0.58	+0.0
1,531,305	+		GFF1502	0.58	-0.5
1,531,305	+		GFF1502	0.58	+0.9
1,531,313	-		GFF1502	0.58	+0.6
1,531,313	-		GFF1502	0.58	+0.2
1,531,313	-		GFF1502	0.58	-1.8
1,531,313	-		GFF1502	0.58	-0.5
1,531,313	-		GFF1502	0.58	+0.9
1,531,364	-		GFF1502	0.62	-2.3
1,531,365	-		GFF1502	0.62	-0.8
1,531,370	+		GFF1502	0.63	+0.3
1,531,370	+		GFF1502	0.63	+1.4
1,531,370	+		GFF1502	0.63	+0.3
1,531,370	+		GFF1502	0.63	-0.0
1,531,378	-		GFF1502	0.63	-1.0
1,531,378	-		GFF1502	0.63	+0.8
1,531,378	-		GFF1502	0.63	+2.5
1,531,378	-		GFF1502	0.63	+0.8
1,531,378	-		GFF1502	0.63	-0.5
1,531,378	-		GFF1502	0.63	-0.7
1,531,378	-		GFF1502	0.63	+0.7
1,531,380	-		GFF1502	0.64	-0.2
1,531,434	+		GFF1502	0.68	+0.5
1,531,454	-		GFF1502	0.70	-0.1
1,531,478	+		GFF1502	0.72	-0.8
1,531,488	+		GFF1502	0.72	+1.4
1,531,496	-		GFF1502	0.73	+0.7
1,531,496	-		GFF1502	0.73	-0.7
1,531,503	+		GFF1502	0.74	+0.6
1,531,511	-		GFF1502	0.74	+1.1
1,531,516	+		GFF1502	0.75	+1.3
1,531,516	+		GFF1502	0.75	+0.4
1,531,516	+		GFF1502	0.75	-0.4
1,531,516	+		GFF1502	0.75	-0.0
1,531,516	+		GFF1502	0.75	+0.3
1,531,516	+		GFF1502	0.75	-1.5
1,531,516	+		GFF1502	0.75	-0.8
1,531,516	+		GFF1502	0.75	-0.7
1,531,516	+		GFF1502	0.75	-1.1
1,531,524	-		GFF1502	0.75	+0.8
1,531,524	-		GFF1502	0.75	+1.9
1,531,524	-		GFF1502	0.75	-0.8
1,531,524	-		GFF1502	0.75	-1.5
1,531,524	-		GFF1502	0.75	-0.3
1,531,524	-		GFF1502	0.75	-0.1
1,531,524	-		GFF1502	0.75	+0.6
1,531,524	-		GFF1502	0.75	-0.7
1,531,524	-		GFF1502	0.75	-2.4
1,531,524	-		GFF1502	0.75	-0.8
1,531,524	-		GFF1502	0.75	-0.2
1,531,531	+		GFF1502	0.76	-1.4
1,531,536	+		GFF1502	0.76	+1.2
1,531,539	+		GFF1502	0.77	-1.2
1,531,539	-		GFF1502	0.77	-1.0
1,531,562	+		GFF1502	0.78	-1.2
1,531,562	-		GFF1502	0.78	-1.0
1,531,566	+		GFF1502	0.79	+0.5
1,531,566	+		GFF1502	0.79	-0.5
1,531,591	+		GFF1502	0.81	-0.2
1,531,616	+		GFF1502	0.83	-1.1
1,531,629	+		GFF1502	0.84	+1.1
1,531,633	+		GFF1502	0.84	+0.3
1,531,637	-		GFF1502	0.85	-0.5
1,531,637	-		GFF1502	0.85	-0.4
1,531,637	-		GFF1502	0.85	+0.3
1,531,637	-		GFF1502	0.85	-1.0
1,531,637	-		GFF1502	0.85	-0.3
1,531,641	-		GFF1502	0.85	-0.2
1,531,641	-		GFF1502	0.85	-1.7
1,531,643	+		GFF1502	0.85	-2.0
1,531,670	+		GFF1502	0.87	+1.0
1,531,670	+		GFF1502	0.87	-1.2
1,531,673	-		GFF1502	0.87	-1.3
1,531,705	-				+0.8
1,531,711	+				-0.0
1,531,711	+				-1.5
1,531,720	+				+1.2
1,531,734	-				-0.1
1,531,750	+				+0.2
1,531,775	+				+1.7
1,531,775	+				-0.7
1,531,775	+				-1.1
1,531,780	+				+0.1
1,531,783	-				-0.4
1,531,825	+				+0.3
1,531,825	+				+0.4
1,531,825	+				+0.7
1,531,833	-				+0.7
1,531,833	-				+1.3
1,531,833	-				-1.7
1,531,858	+				-0.6
1,531,866	-				-2.0
1,531,866	-				-1.4
1,531,904	-				-1.2
1,531,924	+				-0.1
1,531,948	-		GFF1503	0.12	-0.3
1,531,949	-		GFF1503	0.12	+0.4
1,531,949	-		GFF1503	0.12	-0.8
1,531,954	-		GFF1503	0.12	-0.4
1,531,956	+		GFF1503	0.12	-0.2
1,531,963	+		GFF1503	0.13	+0.0
1,531,963	+		GFF1503	0.13	-0.4
1,531,963	+		GFF1503	0.13	+0.6
1,531,963	+		GFF1503	0.13	+0.3
1,531,963	+		GFF1503	0.13	+0.2
1,531,963	+		GFF1503	0.13	+0.6
1,531,963	+		GFF1503	0.13	-2.3
1,531,963	+		GFF1503	0.13	+0.2
1,531,963	+		GFF1503	0.13	-0.3
1,531,963	+		GFF1503	0.13	-1.5
1,531,963	+		GFF1503	0.13	-1.9
1,531,963	+		GFF1503	0.13	+0.2
1,531,963	+		GFF1503	0.13	+1.3
1,531,963	+		GFF1503	0.13	-0.8
1,531,966	-		GFF1503	0.13	+0.1
1,531,971	-		GFF1503	0.14	+0.9
1,531,971	-		GFF1503	0.14	+0.4
1,531,971	-		GFF1503	0.14	+1.0
1,531,971	-		GFF1503	0.14	-1.4
1,531,971	-		GFF1503	0.14	+1.6
1,531,971	-		GFF1503	0.14	-0.3
1,531,971	-		GFF1503	0.14	-2.7
1,531,971	-		GFF1503	0.14	-0.3
1,531,971	-		GFF1503	0.14	-0.4
1,531,973	-		GFF1503	0.14	-0.4
1,532,000	-		GFF1503	0.16	-0.4
1,532,003	+		GFF1503	0.17	+1.1
1,532,053	+		GFF1503	0.21	+0.4
1,532,053	+		GFF1503	0.21	+1.0
1,532,053	+		GFF1503	0.21	-0.6
1,532,061	-		GFF1503	0.22	+0.1
1,532,061	-		GFF1503	0.22	-1.4
1,532,061	-		GFF1503	0.22	-0.3
1,532,061	-		GFF1503	0.22	-0.8
1,532,068	+		GFF1503	0.23	-1.3
1,532,082	-		GFF1503	0.24	-0.1
1,532,086	+		GFF1503	0.24	+0.3
1,532,086	+		GFF1503	0.24	+0.1
1,532,091	+		GFF1503	0.25	-2.7
1,532,125	+		GFF1503	0.28	+1.2
1,532,126	+		GFF1503	0.28	-0.8
1,532,139	-		GFF1503	0.29	-1.9
1,532,142	+		GFF1503	0.30	+0.9
1,532,166	+		GFF1503	0.32	-0.6
1,532,174	-		GFF1503	0.33	-0.4
1,532,177	+		GFF1503	0.33	-0.5
1,532,178	-		GFF1503	0.33	+0.0
1,532,196	+		GFF1503	0.35	-0.5
1,532,204	-		GFF1503	0.35	+0.1
1,532,225	+		GFF1503	0.37	-0.3
1,532,225	+		GFF1503	0.37	+0.3
1,532,225	+		GFF1503	0.37	-0.6
1,532,225	+		GFF1503	0.37	-2.6
1,532,233	-		GFF1503	0.38	-1.3
1,532,233	-		GFF1503	0.38	-1.5
1,532,235	+		GFF1503	0.38	+0.7
1,532,243	-		GFF1503	0.39	-2.0
1,532,243	-		GFF1503	0.39	+0.1
1,532,246	+		GFF1503	0.39	-1.4
1,532,246	+		GFF1503	0.39	+0.3
1,532,251	+		GFF1503	0.40	-0.1
1,532,256	+		GFF1503	0.40	-1.4
1,532,256	+		GFF1503	0.40	-0.1
1,532,256	+		GFF1503	0.40	-0.8
1,532,256	+		GFF1503	0.40	+0.4
1,532,256	+		GFF1503	0.40	+1.1
1,532,264	-		GFF1503	0.41	+0.4
1,532,264	-		GFF1503	0.41	-0.3
1,532,264	-		GFF1503	0.41	-0.4
1,532,264	-		GFF1503	0.41	+0.2
1,532,264	-		GFF1503	0.41	+0.2
1,532,264	-		GFF1503	0.41	+0.7
1,532,264	-		GFF1503	0.41	-0.5
1,532,264	-		GFF1503	0.41	+1.0
1,532,278	+		GFF1503	0.42	+0.8
1,532,293	+		GFF1503	0.44	+1.0
1,532,312	+		GFF1503	0.46	-0.9
1,532,328	+		GFF1503	0.47	+0.5
1,532,338	+		GFF1503	0.48	-1.6
1,532,338	+		GFF1503	0.48	-1.3
1,532,338	+		GFF1503	0.48	-0.4
1,532,345	+		GFF1503	0.49	-1.3
1,532,348	-		GFF1503	0.49	+0.6
1,532,352	-		GFF1503	0.49	+0.3
1,532,355	+		GFF1503	0.50	-0.5
1,532,355	+		GFF1503	0.50	-1.0
1,532,363	-		GFF1503	0.50	+0.4
1,532,375	+		GFF1503	0.51	-1.3
1,532,375	+		GFF1503	0.51	-0.2
1,532,375	+		GFF1503	0.51	-0.1
1,532,375	+		GFF1503	0.51	-0.5
1,532,375	+		GFF1503	0.51	+0.2
1,532,383	-		GFF1503	0.52	+2.0
1,532,383	-		GFF1503	0.52	+0.4
1,532,383	-		GFF1503	0.52	-0.7
1,532,406	+		GFF1503	0.54	-1.1
1,532,425	+		GFF1503	0.56	-0.3
1,532,457	-		GFF1503	0.59	-2.2
1,532,478	+		GFF1503	0.61	-0.3
1,532,483	+		GFF1503	0.61	-0.7
1,532,483	+		GFF1503	0.61	-0.1
1,532,486	-		GFF1503	0.62	-1.1
1,532,486	-		GFF1503	0.62	-0.5
1,532,486	-		GFF1503	0.62	-0.4
1,532,491	-		GFF1503	0.62	-1.4
1,532,509	+		GFF1503	0.64	+0.1
1,532,509	+		GFF1503	0.64	+2.0
1,532,509	+		GFF1503	0.64	-0.4
1,532,509	+		GFF1503	0.64	+1.7
1,532,514	+		GFF1503	0.64	+1.3
1,532,517	-		GFF1503	0.65	+1.1
1,532,524	+		GFF1503	0.65	-0.5
1,532,524	+		GFF1503	0.65	-0.5
1,532,524	+		GFF1503	0.65	-0.1
1,532,524	+		GFF1503	0.65	-0.2
1,532,532	-		GFF1503	0.66	+0.8
1,532,532	-		GFF1503	0.66	-1.7
1,532,532	-		GFF1503	0.66	+0.7
1,532,532	-		GFF1503	0.66	+0.2
1,532,532	-		GFF1503	0.66	-1.1
1,532,532	-		GFF1503	0.66	+0.9
1,532,532	-		GFF1503	0.66	-1.1
1,532,532	-		GFF1503	0.66	-0.2
1,532,532	-		GFF1503	0.66	+0.2
1,532,532	-		GFF1503	0.66	-1.9
1,532,576	-		GFF1503	0.70	-1.2
1,532,578	+		GFF1503	0.70	+1.2
1,532,599	+		GFF1503	0.72	-1.4
1,532,602	-		GFF1503	0.73	+0.2
1,532,607	-		GFF1503	0.73	-0.2
1,532,609	+		GFF1503	0.73	+1.1
1,532,609	+		GFF1503	0.73	-0.4
1,532,615	+		GFF1503	0.74	-2.8
1,532,634	+		GFF1503	0.76	-0.1
1,532,642	-		GFF1503	0.76	-1.4
1,532,642	-		GFF1503	0.76	-1.3
1,532,649	+		GFF1503	0.77	-3.2
1,532,649	+		GFF1503	0.77	+0.0
1,532,649	+		GFF1503	0.77	+0.4
1,532,657	-		GFF1503	0.78	+0.0
1,532,657	-		GFF1503	0.78	-2.3
1,532,661	+		GFF1503	0.78	+0.8
1,532,668	+		GFF1503	0.79	+0.9
1,532,668	+		GFF1503	0.79	-1.6
1,532,669	+		GFF1503	0.79	-2.0
1,532,669	+		GFF1503	0.79	-2.4
1,532,676	-		GFF1503	0.79	-0.1
1,532,676	-		GFF1503	0.79	-1.1
1,532,676	-		GFF1503	0.79	+0.0
1,532,676	-		GFF1503	0.79	-0.6
1,532,677	-		GFF1503	0.80	-1.3
1,532,691	+		GFF1503	0.81	-0.3
1,532,699	-		GFF1503	0.82	-1.9
1,532,699	-		GFF1503	0.82	-0.6
1,532,715	+		GFF1503	0.83	-0.0
1,532,745	+		GFF1503	0.86	+1.1
1,532,745	+		GFF1503	0.86	+0.8
1,532,753	-		GFF1503	0.87	+0.3
1,532,760	+		GFF1503	0.87	-0.8
1,532,760	+		GFF1503	0.87	-0.7
1,532,760	+		GFF1503	0.87	+0.3
1,532,760	+		GFF1503	0.87	-0.2
1,532,768	-		GFF1503	0.88	-0.1
1,532,780	+		GFF1503	0.89	+0.3
1,532,801	-				+1.2
1,532,805	+				-0.4
1,532,813	-				-0.4
1,532,849	-				-0.1
1,532,859	-				+0.1
1,532,860	+				+0.3
1,532,868	+				-0.1
1,532,880	-				-0.5
1,532,886	-				-0.1
1,532,889	+				-0.3
1,532,894	+				-1.5
1,532,897	-				-0.6
1,532,907	+				+0.8
1,532,915	-				-0.0
1,532,931	+				-0.6
1,532,939	-				+1.5
1,532,939	-				-0.2
1,532,939	-				+1.3
1,532,947	-				-0.7
1,532,947	-				-0.8
1,532,960	+				-1.2
1,532,965	+				-1.8
1,532,973	-				-0.1
1,532,973	-				+0.3
1,532,973	-				-0.9
1,532,973	-				+1.5
1,532,978	-				+0.5
1,532,985	-				-0.3
1,533,033	-				-0.1
1,533,033	-				+0.4
1,533,048	+				+0.1
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