Strain Fitness in Sphingobium sp. HT1-2 around GFF1502

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,529,630	+		GFF1501	0.37	-1.1
1,529,645	+		GFF1501	0.38	-2.0
1,529,649	+		GFF1501	0.38	+0.8
1,529,700	+		GFF1501	0.41	+0.1
1,529,703	-		GFF1501	0.42	+0.4
1,529,703	-		GFF1501	0.42	+0.7
1,529,705	+		GFF1501	0.42	-1.0
1,529,707	+		GFF1501	0.42	+1.9
1,529,708	-		GFF1501	0.42	+0.0
1,529,708	-		GFF1501	0.42	-0.6
1,529,708	-		GFF1501	0.42	-1.4
1,529,723	+		GFF1501	0.43	-1.2
1,529,729	+		GFF1501	0.43	+0.1
1,529,729	+		GFF1501	0.43	+0.3
1,529,729	+		GFF1501	0.43	-0.8
1,529,729	+		GFF1501	0.43	-0.3
1,529,729	+		GFF1501	0.43	+1.3
1,529,737	-		GFF1501	0.44	-0.4
1,529,737	-		GFF1501	0.44	-0.5
1,529,737	-		GFF1501	0.44	-0.2
1,529,812	+		GFF1501	0.49	-0.6
1,529,820	-		GFF1501	0.49	+0.1
1,529,820	-		GFF1501	0.49	+0.5
1,529,820	-		GFF1501	0.49	-0.5
1,529,821	-		GFF1501	0.49	-0.8
1,529,827	+		GFF1501	0.50	-1.3
1,529,835	-		GFF1501	0.50	+1.4
1,529,835	-		GFF1501	0.50	-0.6
1,529,854	+		GFF1501	0.51	-1.2
1,529,889	+		GFF1501	0.54	+0.1
1,529,892	-		GFF1501	0.54	+0.2
1,529,894	+		GFF1501	0.54	+0.2
1,529,894	+		GFF1501	0.54	-0.8
1,529,894	+		GFF1501	0.54	-0.1
1,529,894	+		GFF1501	0.54	-0.3
1,529,894	+		GFF1501	0.54	-1.2
1,529,899	+		GFF1501	0.54	+0.4
1,529,899	+		GFF1501	0.54	-1.0
1,529,902	-		GFF1501	0.54	+0.0
1,529,904	+		GFF1501	0.55	-0.9
1,529,907	+		GFF1501	0.55	-2.8
1,529,907	-		GFF1501	0.55	-0.1
1,529,907	-		GFF1501	0.55	+1.2
1,529,907	-		GFF1501	0.55	-0.1
1,529,909	+		GFF1501	0.55	-2.3
1,529,915	-		GFF1501	0.55	-0.3
1,529,922	-		GFF1501	0.56	-1.7
1,529,964	+		GFF1501	0.59	-1.4
1,529,969	+		GFF1501	0.59	-2.2
1,529,969	+		GFF1501	0.59	-1.0
1,529,969	+		GFF1501	0.59	-1.1
1,529,969	+		GFF1501	0.59	-1.4
1,529,969	+		GFF1501	0.59	+0.7
1,529,977	-		GFF1501	0.59	+0.5
1,529,977	-		GFF1501	0.59	-1.1
1,529,977	-		GFF1501	0.59	+0.6
1,529,977	-		GFF1501	0.59	-1.3
1,529,977	-		GFF1501	0.59	+0.6
1,529,977	-		GFF1501	0.59	+0.7
1,529,977	-		GFF1501	0.59	-0.3
1,529,977	-		GFF1501	0.59	+1.2
1,529,977	-		GFF1501	0.59	-0.5
1,529,977	-		GFF1501	0.59	-0.0
1,529,977	-		GFF1501	0.59	+0.3
1,529,977	-		GFF1501	0.59	+0.6
1,529,990	-		GFF1501	0.60	-0.3
1,530,023	-		GFF1501	0.62	-0.1
1,530,033	-		GFF1501	0.63	-0.5
1,530,083	-		GFF1501	0.66	+0.7
1,530,083	-		GFF1501	0.66	-0.3
1,530,083	-		GFF1501	0.66	-0.3
1,530,101	+		GFF1501	0.67	-1.4
1,530,133	-		GFF1501	0.70	-0.5
1,530,143	-		GFF1501	0.70	+0.8
1,530,154	+		GFF1501	0.71	-0.6
1,530,154	-		GFF1501	0.71	-2.1
1,530,164	-		GFF1501	0.72	+0.2
1,530,170	+		GFF1501	0.72	+1.6
1,530,171	-		GFF1501	0.72	+0.8
1,530,182	+		GFF1501	0.73	-0.7
1,530,182	+		GFF1501	0.73	-0.1
1,530,182	+		GFF1501	0.73	-0.2
1,530,182	+		GFF1501	0.73	-0.1
1,530,190	-		GFF1501	0.73	-0.8
1,530,190	-		GFF1501	0.73	+0.8
1,530,190	-		GFF1501	0.73	-0.1
1,530,207	-		GFF1501	0.74	-1.2
1,530,207	-		GFF1501	0.74	-0.2
1,530,207	-		GFF1501	0.74	-0.5
1,530,216	+		GFF1501	0.75	-0.1
1,530,221	+		GFF1501	0.75	-0.7
1,530,221	+		GFF1501	0.75	-2.4
1,530,226	+		GFF1501	0.76	-0.7
1,530,229	-		GFF1501	0.76	-0.1
1,530,229	-		GFF1501	0.76	-0.4
1,530,229	-		GFF1501	0.76	-0.4
1,530,229	-		GFF1501	0.76	+0.5
1,530,239	+		GFF1501	0.76	+1.4
1,530,245	+		GFF1501	0.77	+0.1
1,530,253	-		GFF1501	0.77	+0.2
1,530,253	-		GFF1501	0.77	+0.0
1,530,254	+		GFF1501	0.77	-0.1
1,530,254	+		GFF1501	0.77	+0.7
1,530,254	+		GFF1501	0.77	-2.1
1,530,254	+		GFF1501	0.77	-1.2
1,530,254	+		GFF1501	0.77	+0.6
1,530,309	+		GFF1501	0.81	+0.4
1,530,313	+		GFF1501	0.81	+1.6
1,530,321	+		GFF1501	0.82	+0.3
1,530,332	+		GFF1501	0.82	-2.2
1,530,332	+		GFF1501	0.82	+0.0
1,530,335	-		GFF1501	0.83	-2.4
1,530,335	-		GFF1501	0.83	-0.4
1,530,337	+		GFF1501	0.83	-0.4
1,530,337	+		GFF1501	0.83	+0.6
1,530,337	+		GFF1501	0.83	-0.1
1,530,337	+		GFF1501	0.83	-1.0
1,530,337	+		GFF1501	0.83	-2.8
1,530,340	-		GFF1501	0.83	-1.1
1,530,345	-		GFF1501	0.83	-1.8
1,530,363	+		GFF1501	0.85	-1.1
1,530,376	-		GFF1501	0.85	+0.2
1,530,386	-		GFF1501	0.86	-1.2
1,530,391	+		GFF1501	0.86	+0.5
1,530,391	+		GFF1501	0.86	-1.4
1,530,391	+		GFF1501	0.86	-0.6
1,530,391	-		GFF1501	0.86	-0.3
1,530,399	-		GFF1501	0.87	-0.3
1,530,399	-		GFF1501	0.87	-2.7
1,530,399	-		GFF1501	0.87	-0.1
1,530,401	+		GFF1501	0.87	-0.6
1,530,404	-		GFF1501	0.87	+0.6
1,530,406	+		GFF1501	0.87	-0.5
1,530,414	-		GFF1501	0.88	-0.2
1,530,429	+		GFF1501	0.89	+0.4
1,530,429	+		GFF1501	0.89	-0.9
1,530,442	+		GFF1501	0.90	+0.9
1,530,449	+				-0.6
1,530,458	-				-1.4
1,530,458	-				-1.9
1,530,458	-				-0.1
1,530,460	+				-1.5
1,530,468	-				-0.4
1,530,468	-				+0.6
1,530,476	-				+1.6
1,530,485	+				-2.3
1,530,495	+				-0.4
1,530,581	-				-1.8
1,530,581	-				+1.1
1,530,604	+				-1.8
1,530,616	+				+0.3
1,530,616	+				-0.5
1,530,616	+				+0.0
1,530,616	+				-0.2
1,530,616	+				+0.4
1,530,619	-				-0.1
1,530,619	-				-2.0
1,530,624	-				+0.8
1,530,624	-				+1.4
1,530,624	-				+0.3
1,530,624	-				-0.6
1,530,624	-				+0.3
1,530,624	-				-1.1
1,530,624	-				-0.6
1,530,649	-				+0.5
1,530,649	-				+0.6
1,530,662	+				+1.0
1,530,670	-				+0.2
1,530,670	-				+0.3
1,530,708	+				+0.1
1,530,744	+		GFF1502	0.12	+1.0
1,530,752	-		GFF1502	0.13	+0.5
1,530,753	+		GFF1502	0.13	-0.4
1,530,761	-		GFF1502	0.13	-0.4
1,530,798	+		GFF1502	0.16	-0.5
1,530,809	+		GFF1502	0.17	-0.4
1,530,809	+		GFF1502	0.17	-0.5
1,530,816	+		GFF1502	0.18	-0.4
1,530,816	+		GFF1502	0.18	+0.1
1,530,824	-		GFF1502	0.18	-0.7
1,530,879	+		GFF1502	0.23	+0.2
1,530,879	+		GFF1502	0.23	-0.4
1,530,882	-		GFF1502	0.23	-1.3
1,530,887	-		GFF1502	0.24	+0.6
1,530,908	-		GFF1502	0.25	+0.2
1,530,920	+		GFF1502	0.26	-2.6
1,530,923	-		GFF1502	0.27	-1.5
1,530,928	-		GFF1502	0.27	+0.2
1,530,939	+		GFF1502	0.28	-1.6
1,530,947	-		GFF1502	0.28	+1.4
1,530,947	-		GFF1502	0.28	-0.6
1,530,988	+		GFF1502	0.32	+1.0
1,530,988	+		GFF1502	0.32	+0.9
1,530,988	+		GFF1502	0.32	+0.4
1,530,988	+		GFF1502	0.32	+0.3
1,530,996	-		GFF1502	0.32	-0.3
1,530,996	-		GFF1502	0.32	-1.9
1,531,001	-		GFF1502	0.33	+0.8
1,531,011	-		GFF1502	0.34	+0.6
1,531,011	-		GFF1502	0.34	-0.8
1,531,013	+		GFF1502	0.34	-0.3
1,531,021	-		GFF1502	0.34	+0.7
1,531,029	+		GFF1502	0.35	-0.6
1,531,035	+		GFF1502	0.36	+0.5
1,531,078	-		GFF1502	0.39	-1.1
1,531,089	+		GFF1502	0.40	-0.4
1,531,094	-		GFF1502	0.40	+0.6
1,531,102	+		GFF1502	0.41	-0.9
1,531,122	-		GFF1502	0.43	-1.1
1,531,192	-		GFF1502	0.48	+0.6
1,531,192	-		GFF1502	0.48	+0.4
1,531,192	-		GFF1502	0.48	-0.4
1,531,232	-		GFF1502	0.52	-0.6
1,531,235	+		GFF1502	0.52	+0.2
1,531,243	-		GFF1502	0.53	+1.3
1,531,252	+		GFF1502	0.53	+0.5
1,531,252	+		GFF1502	0.53	+0.5
1,531,257	+		GFF1502	0.54	-0.6
1,531,257	+		GFF1502	0.54	-0.6
1,531,260	-		GFF1502	0.54	-0.1
1,531,260	-		GFF1502	0.54	+0.0
1,531,260	-		GFF1502	0.54	-1.5
1,531,262	+		GFF1502	0.54	+0.7
1,531,265	-		GFF1502	0.54	-1.1
1,531,265	-		GFF1502	0.54	-0.5
1,531,267	+		GFF1502	0.54	-1.3
1,531,270	-		GFF1502	0.55	+1.0
1,531,295	-		GFF1502	0.57	+0.4
1,531,295	-		GFF1502	0.57	+0.2
1,531,305	+		GFF1502	0.58	+0.0
1,531,305	+		GFF1502	0.58	-0.5
1,531,305	+		GFF1502	0.58	+0.9
1,531,313	-		GFF1502	0.58	+0.6
1,531,313	-		GFF1502	0.58	+0.2
1,531,313	-		GFF1502	0.58	-1.8
1,531,313	-		GFF1502	0.58	-0.5
1,531,313	-		GFF1502	0.58	+0.9
1,531,364	-		GFF1502	0.62	-2.3
1,531,365	-		GFF1502	0.62	-0.8
1,531,370	+		GFF1502	0.63	+0.3
1,531,370	+		GFF1502	0.63	+1.4
1,531,370	+		GFF1502	0.63	+0.3
1,531,370	+		GFF1502	0.63	-0.0
1,531,378	-		GFF1502	0.63	-1.0
1,531,378	-		GFF1502	0.63	+0.8
1,531,378	-		GFF1502	0.63	+2.5
1,531,378	-		GFF1502	0.63	+0.8
1,531,378	-		GFF1502	0.63	-0.5
1,531,378	-		GFF1502	0.63	-0.7
1,531,378	-		GFF1502	0.63	+0.7
1,531,380	-		GFF1502	0.64	-0.2
1,531,434	+		GFF1502	0.68	+0.5
1,531,454	-		GFF1502	0.70	-0.1
1,531,478	+		GFF1502	0.72	-0.8
1,531,488	+		GFF1502	0.72	+1.4
1,531,496	-		GFF1502	0.73	+0.7
1,531,496	-		GFF1502	0.73	-0.7
1,531,503	+		GFF1502	0.74	+0.6
1,531,511	-		GFF1502	0.74	+1.1
1,531,516	+		GFF1502	0.75	+1.3
1,531,516	+		GFF1502	0.75	+0.4
1,531,516	+		GFF1502	0.75	-0.4
1,531,516	+		GFF1502	0.75	-0.0
1,531,516	+		GFF1502	0.75	+0.3
1,531,516	+		GFF1502	0.75	-1.5
1,531,516	+		GFF1502	0.75	-0.8
1,531,516	+		GFF1502	0.75	-0.7
1,531,516	+		GFF1502	0.75	-1.1
1,531,524	-		GFF1502	0.75	+0.8
1,531,524	-		GFF1502	0.75	+1.9
1,531,524	-		GFF1502	0.75	-0.8
1,531,524	-		GFF1502	0.75	-1.5
1,531,524	-		GFF1502	0.75	-0.3
1,531,524	-		GFF1502	0.75	-0.1
1,531,524	-		GFF1502	0.75	+0.6
1,531,524	-		GFF1502	0.75	-0.7
1,531,524	-		GFF1502	0.75	-2.4
1,531,524	-		GFF1502	0.75	-0.8
1,531,524	-		GFF1502	0.75	-0.2
1,531,531	+		GFF1502	0.76	-1.4
1,531,536	+		GFF1502	0.76	+1.2
1,531,539	+		GFF1502	0.77	-1.2
1,531,539	-		GFF1502	0.77	-1.0
1,531,562	+		GFF1502	0.78	-1.2
1,531,562	-		GFF1502	0.78	-1.0
1,531,566	+		GFF1502	0.79	+0.5
1,531,566	+		GFF1502	0.79	-0.5
1,531,591	+		GFF1502	0.81	-0.2
1,531,616	+		GFF1502	0.83	-1.1
1,531,629	+		GFF1502	0.84	+1.1
1,531,633	+		GFF1502	0.84	+0.3
1,531,637	-		GFF1502	0.85	-0.5
1,531,637	-		GFF1502	0.85	-0.4
1,531,637	-		GFF1502	0.85	+0.3
1,531,637	-		GFF1502	0.85	-1.0
1,531,637	-		GFF1502	0.85	-0.3
1,531,641	-		GFF1502	0.85	-0.2
1,531,641	-		GFF1502	0.85	-1.7
1,531,643	+		GFF1502	0.85	-2.0
1,531,670	+		GFF1502	0.87	+1.0
1,531,670	+		GFF1502	0.87	-1.2
1,531,673	-		GFF1502	0.87	-1.3
1,531,705	-				+0.8
1,531,711	+				-0.0
1,531,711	+				-1.5
1,531,720	+				+1.2
1,531,734	-				-0.1
1,531,750	+				+0.2
1,531,775	+				+1.7
1,531,775	+				-0.7
1,531,775	+				-1.1
1,531,780	+				+0.1
1,531,783	-				-0.4
1,531,825	+				+0.3
1,531,825	+				+0.4
1,531,825	+				+0.7
1,531,833	-				+0.7
1,531,833	-				+1.3
1,531,833	-				-1.7
1,531,858	+				-0.6
1,531,866	-				-2.0
1,531,866	-				-1.4
1,531,904	-				-1.2
1,531,924	+				-0.1
1,531,948	-		GFF1503	0.12	-0.3
1,531,949	-		GFF1503	0.12	+0.4
1,531,949	-		GFF1503	0.12	-0.8
1,531,954	-		GFF1503	0.12	-0.4
1,531,956	+		GFF1503	0.12	-0.2
1,531,963	+		GFF1503	0.13	+0.0
1,531,963	+		GFF1503	0.13	-0.4
1,531,963	+		GFF1503	0.13	+0.6
1,531,963	+		GFF1503	0.13	+0.3
1,531,963	+		GFF1503	0.13	+0.2
1,531,963	+		GFF1503	0.13	+0.6
1,531,963	+		GFF1503	0.13	-2.3
1,531,963	+		GFF1503	0.13	+0.2
1,531,963	+		GFF1503	0.13	-0.3
1,531,963	+		GFF1503	0.13	-1.5
1,531,963	+		GFF1503	0.13	-1.9
1,531,963	+		GFF1503	0.13	+0.2
1,531,963	+		GFF1503	0.13	+1.3
1,531,963	+		GFF1503	0.13	-0.8
1,531,966	-		GFF1503	0.13	+0.1
1,531,971	-		GFF1503	0.14	+0.9
1,531,971	-		GFF1503	0.14	+0.4
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