Strain Fitness in Sphingobium sp. HT1-2 around GFF1499

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,524,764	+		GFF1498	0.13	+0.3
1,524,764	+		GFF1498	0.13	-0.4
1,524,764	+		GFF1498	0.13	-0.2
1,524,764	+		GFF1498	0.13	-0.5
1,524,764	+		GFF1498	0.13	-0.9
1,524,764	+		GFF1498	0.13	+1.0
1,524,764	+		GFF1498	0.13	+0.7
1,524,764	+		GFF1498	0.13	-0.4
1,524,764	+		GFF1498	0.13	+0.8
1,524,764	-		GFF1498	0.13	+1.8
1,524,772	-		GFF1498	0.14	+0.3
1,524,772	-		GFF1498	0.14	-1.0
1,524,772	-		GFF1498	0.14	-0.7
1,524,772	-		GFF1498	0.14	-1.4
1,524,772	-		GFF1498	0.14	-0.6
1,524,772	-		GFF1498	0.14	-0.6
1,524,772	-		GFF1498	0.14	-0.2
1,524,772	-		GFF1498	0.14	-0.0
1,524,772	-		GFF1498	0.14	-0.8
1,524,772	-		GFF1498	0.14	-0.5
1,524,784	+		GFF1498	0.15	-2.0
1,524,784	+		GFF1498	0.15	+0.0
1,524,784	+		GFF1498	0.15	-2.1
1,524,784	+		GFF1498	0.15	-0.5
1,524,792	-		GFF1498	0.16	+0.5
1,524,792	-		GFF1498	0.16	+1.1
1,524,800	-		GFF1498	0.16	+0.1
1,524,840	+		GFF1498	0.20	+0.7
1,524,845	+		GFF1498	0.20	+0.8
1,524,857	+		GFF1498	0.21	+0.3
1,524,857	+		GFF1498	0.21	-0.6
1,524,867	+		GFF1498	0.22	-0.4
1,524,889	+		GFF1498	0.24	-1.1
1,524,966	+		GFF1498	0.31	-0.1
1,524,966	+		GFF1498	0.31	-0.6
1,524,974	-		GFF1498	0.32	-0.5
1,524,974	-		GFF1498	0.32	-0.8
1,525,003	+		GFF1498	0.34	-0.2
1,525,011	-		GFF1498	0.35	-1.5
1,525,024	+		GFF1498	0.36	+0.8
1,525,030	+		GFF1498	0.37	+0.7
1,525,032	-		GFF1498	0.37	+0.5
1,525,044	-		GFF1498	0.38	+0.1
1,525,064	-		GFF1498	0.40	-1.2
1,525,079	+		GFF1498	0.41	+1.7
1,525,079	+		GFF1498	0.41	+0.4
1,525,084	+		GFF1498	0.42	-1.2
1,525,087	-		GFF1498	0.42	+0.0
1,525,115	+		GFF1498	0.44	+1.0
1,525,123	+		GFF1498	0.45	+0.3
1,525,123	-		GFF1498	0.45	-0.5
1,525,153	+		GFF1498	0.48	-0.3
1,525,163	+		GFF1498	0.49	-1.2
1,525,163	+		GFF1498	0.49	-2.4
1,525,163	-		GFF1498	0.49	-0.2
1,525,199	+		GFF1498	0.52	-1.0
1,525,240	+		GFF1498	0.55	-0.7
1,525,250	+		GFF1498	0.56	-1.7
1,525,343	-		GFF1498	0.65	+2.5
1,525,345	-		GFF1498	0.65	-1.0
1,525,350	-		GFF1498	0.65	-0.2
1,525,359	+		GFF1498	0.66	-1.0
1,525,359	+		GFF1498	0.66	+1.3
1,525,362	-		GFF1498	0.66	-0.4
1,525,377	+		GFF1498	0.68	+0.7
1,525,402	+		GFF1498	0.70	-0.6
1,525,402	-		GFF1498	0.70	+0.3
1,525,409	-		GFF1498	0.70	+0.8
1,525,429	-		GFF1498	0.72	-1.4
1,525,429	-		GFF1498	0.72	-0.1
1,525,445	+		GFF1498	0.74	-0.1
1,525,460	-		GFF1498	0.75	-0.2
1,525,465	-		GFF1498	0.75	-0.4
1,525,531	+		GFF1498	0.81	-0.0
1,525,539	-		GFF1498	0.82	+0.4
1,525,539	-		GFF1498	0.82	-2.3
1,525,575	+		GFF1498	0.85	+0.3
1,525,588	-		GFF1498	0.86	+0.7
1,525,675	-				-0.9
1,525,701	-				+0.6
1,525,715	+				-0.4
1,525,723	-				+0.3
1,525,743	+				-0.7
1,525,746	+				-1.6
1,525,767	+				-2.1
1,525,796	-				-1.0
1,525,837	-				-1.3
1,525,839	+				-0.8
1,525,840	+				+0.3
1,525,847	-				+1.5
1,525,847	-				+0.3
1,525,890	+		GFF1499	0.11	-0.1
1,525,895	+		GFF1499	0.11	-0.2
1,525,898	-		GFF1499	0.11	+0.2
1,525,900	+		GFF1499	0.11	-0.1
1,525,900	+		GFF1499	0.11	+0.6
1,525,900	+		GFF1499	0.11	-1.3
1,525,900	+		GFF1499	0.11	+1.4
1,525,903	-		GFF1499	0.12	-0.2
1,525,908	-		GFF1499	0.12	+0.1
1,525,908	-		GFF1499	0.12	-1.4
1,525,914	-		GFF1499	0.12	+0.4
1,525,923	-		GFF1499	0.13	-0.5
1,525,926	+		GFF1499	0.13	-1.4
1,525,934	-		GFF1499	0.14	-0.3
1,525,934	-		GFF1499	0.14	+0.9
1,525,934	-		GFF1499	0.14	+0.1
1,525,934	-		GFF1499	0.14	-2.0
1,525,944	-		GFF1499	0.15	+1.0
1,525,959	+		GFF1499	0.16	-0.6
1,525,967	-		GFF1499	0.16	-0.3
1,525,967	-		GFF1499	0.16	-0.2
1,526,003	-		GFF1499	0.19	+0.3
1,526,013	+		GFF1499	0.20	+0.1
1,526,040	+		GFF1499	0.22	+1.1
1,526,040	+		GFF1499	0.22	-0.5
1,526,045	+		GFF1499	0.22	-0.7
1,526,064	-		GFF1499	0.23	-0.1
1,526,123	-		GFF1499	0.28	-1.5
1,526,128	-		GFF1499	0.28	-0.2
1,526,128	-		GFF1499	0.28	+0.5
1,526,133	+		GFF1499	0.28	-1.4
1,526,151	-		GFF1499	0.30	+0.3
1,526,171	-		GFF1499	0.31	+0.1
1,526,181	+		GFF1499	0.32	-0.7
1,526,189	-		GFF1499	0.32	-0.5
1,526,224	+		GFF1499	0.35	-0.3
1,526,230	+		GFF1499	0.35	+0.0
1,526,230	+		GFF1499	0.35	-2.3
1,526,232	-		GFF1499	0.36	+1.0
1,526,232	-		GFF1499	0.36	-1.8
1,526,232	-		GFF1499	0.36	-2.9
1,526,232	-		GFF1499	0.36	-0.1
1,526,232	-		GFF1499	0.36	-0.6
1,526,232	-		GFF1499	0.36	-0.3
1,526,235	+		GFF1499	0.36	-1.2
1,526,238	-		GFF1499	0.36	-1.6
1,526,238	-		GFF1499	0.36	-1.5
1,526,238	-		GFF1499	0.36	-1.3
1,526,262	+		GFF1499	0.38	-2.1
1,526,267	+		GFF1499	0.38	-0.6
1,526,270	-		GFF1499	0.38	-0.7
1,526,272	+		GFF1499	0.38	-0.2
1,526,274	+		GFF1499	0.39	-1.3
1,526,274	+		GFF1499	0.39	-0.8
1,526,280	-		GFF1499	0.39	-0.8
1,526,292	-		GFF1499	0.40	+1.1
1,526,425	-		GFF1499	0.50	+1.3
1,526,425	-		GFF1499	0.50	+1.4
1,526,428	-		GFF1499	0.50	+0.4
1,526,434	+		GFF1499	0.50	+0.6
1,526,447	-		GFF1499	0.51	+0.3
1,526,478	-		GFF1499	0.53	-0.7
1,526,504	+		GFF1499	0.55	-0.7
1,526,504	+		GFF1499	0.55	+0.6
1,526,513	+		GFF1499	0.56	-0.4
1,526,536	-		GFF1499	0.58	+0.5
1,526,546	+		GFF1499	0.58	+0.0
1,526,607	+		GFF1499	0.63	-0.4
1,526,611	+		GFF1499	0.63	+0.1
1,526,650	-		GFF1499	0.66	-0.5
1,526,683	+		GFF1499	0.68	-0.3
1,526,703	+		GFF1499	0.70	-1.2
1,526,704	-		GFF1499	0.70	-0.8
1,526,727	-		GFF1499	0.72	-1.4
1,526,758	-		GFF1499	0.74	+0.9
1,526,759	+		GFF1499	0.74	+0.4
1,526,759	+		GFF1499	0.74	+0.8
1,526,760	+		GFF1499	0.74	+0.5
1,526,767	-		GFF1499	0.75	+0.2
1,526,784	+		GFF1499	0.76	+1.5
1,526,792	-		GFF1499	0.76	-0.4
1,526,802	-		GFF1499	0.77	-2.0
1,526,816	-		GFF1499	0.78	-2.0
1,526,831	-		GFF1499	0.79	+0.9
1,526,834	+		GFF1499	0.79	-1.1
1,526,840	-		GFF1499	0.80	+0.5
1,526,865	+		GFF1499	0.82	+1.4
1,526,887	-		GFF1499	0.83	-0.1
1,526,892	+		GFF1499	0.84	-0.4
1,526,892	+		GFF1499	0.84	-1.2
1,526,892	+		GFF1499	0.84	-0.7
1,526,892	+		GFF1499	0.84	-2.1
1,526,892	+		GFF1499	0.84	-1.4
1,526,895	+		GFF1499	0.84	-1.6
1,526,897	+		GFF1499	0.84	-0.5
1,526,897	+		GFF1499	0.84	-1.4
1,526,897	+		GFF1499	0.84	-0.5
1,526,897	+		GFF1499	0.84	+0.6
1,526,897	+		GFF1499	0.84	-0.2
1,526,897	+		GFF1499	0.84	-0.5
1,526,900	-		GFF1499	0.84	+0.1
1,526,900	-		GFF1499	0.84	-1.0
1,526,905	-		GFF1499	0.85	-0.4
1,526,905	-		GFF1499	0.85	-1.6
1,526,905	-		GFF1499	0.85	+0.3
1,526,905	-		GFF1499	0.85	-0.5
1,526,905	-		GFF1499	0.85	-1.3
1,526,916	+		GFF1499	0.85	-2.1
1,526,951	+		GFF1499	0.88	-0.0
1,526,951	+		GFF1499	0.88	-1.5
1,526,951	+		GFF1499	0.88	-1.3
1,526,959	-		GFF1499	0.89	-1.6
1,526,959	-		GFF1499	0.89	+0.4
1,526,959	-		GFF1499	0.89	+0.7
1,526,960	-		GFF1499	0.89	-0.7
1,527,015	+				-1.2
1,527,025	+				+1.4
1,527,042	+				+0.4
1,527,050	-				-0.1
1,527,050	-				+1.4
1,527,050	-				-0.1
1,527,050	-				-0.5
1,527,088	+				-1.7
1,527,106	+				+0.6
1,527,120	-				+0.0
1,527,122	+				-1.3
1,527,145	-				-1.3
1,527,147	+				-0.5
1,527,155	-				+0.3
1,527,171	-				-2.2
1,527,171	-				-2.4
1,527,200	+				-0.5
1,527,200	+				-1.1
1,527,208	-				-2.3
1,527,213	-				-0.9
1,527,240	-				-0.4
1,527,250	+				+1.0
1,527,289	+				-0.1
1,527,294	+				+1.3
1,527,294	+				-2.2
1,527,294	+				+1.3
1,527,297	-				+1.1
1,527,297	-				-0.5
1,527,297	-				+0.5
1,527,299	+				-0.0
1,527,319	+				-0.1
1,527,390	+		GFF1500	0.12	+0.0
1,527,390	+		GFF1500	0.12	+1.4
1,527,390	+		GFF1500	0.12	+0.7
1,527,390	+		GFF1500	0.12	-0.7
1,527,395	+		GFF1500	0.12	+0.3
1,527,398	-		GFF1500	0.13	-0.0
1,527,402	-		GFF1500	0.13	-0.4
1,527,423	-		GFF1500	0.14	+0.8
1,527,429	+		GFF1500	0.14	-0.5
1,527,467	+		GFF1500	0.16	+0.4
1,527,467	+		GFF1500	0.16	+0.2
1,527,472	+		GFF1500	0.17	+0.7
1,527,527	+		GFF1500	0.19	-1.0
1,527,527	+		GFF1500	0.19	-0.5
1,527,527	+		GFF1500	0.19	-2.0
1,527,535	-		GFF1500	0.20	-0.5
1,527,535	-		GFF1500	0.20	-0.3
1,527,535	-		GFF1500	0.20	+0.2
1,527,535	-		GFF1500	0.20	+0.6
1,527,535	-		GFF1500	0.20	-0.2
1,527,540	+		GFF1500	0.20	-1.3
1,527,549	+		GFF1500	0.21	+0.7
1,527,553	-		GFF1500	0.21	-2.2
1,527,554	-		GFF1500	0.21	+1.4
1,527,559	+		GFF1500	0.21	-0.2
1,527,569	+		GFF1500	0.22	+1.2
1,527,577	-		GFF1500	0.22	+0.4
1,527,577	-		GFF1500	0.22	+1.1
1,527,606	-		GFF1500	0.24	-0.1
1,527,608	-		GFF1500	0.24	-0.1
1,527,608	-		GFF1500	0.24	+0.2
1,527,613	+		GFF1500	0.24	-0.3
1,527,655	+		GFF1500	0.26	-0.1
1,527,657	+		GFF1500	0.26	-2.4
1,527,661	-		GFF1500	0.26	+0.3
1,527,711	-		GFF1500	0.29	+0.4
1,527,728	+		GFF1500	0.30	+0.3
1,527,733	-		GFF1500	0.30	-0.8
1,527,734	+		GFF1500	0.30	-0.8
1,527,736	-		GFF1500	0.30	-1.2
1,527,740	-		GFF1500	0.31	-0.5
1,527,746	-		GFF1500	0.31	+0.2
1,527,754	+		GFF1500	0.31	+0.1
1,527,754	+		GFF1500	0.31	-1.4
1,527,762	-		GFF1500	0.32	+1.3
1,527,762	-		GFF1500	0.32	-0.7
1,527,762	-		GFF1500	0.32	+0.3
1,527,762	-		GFF1500	0.32	+0.4
1,527,762	-		GFF1500	0.32	-1.0
1,527,762	-		GFF1500	0.32	+0.5
1,527,762	-		GFF1500	0.32	+0.1
1,527,762	-		GFF1500	0.32	+1.5
1,527,762	-		GFF1500	0.32	-1.1
1,527,762	-		GFF1500	0.32	+0.5
1,527,782	+		GFF1500	0.33	-0.9
1,527,782	+		GFF1500	0.33	+0.7
1,527,782	+		GFF1500	0.33	-0.3
1,527,782	+		GFF1500	0.33	+0.3
1,527,790	-		GFF1500	0.33	-0.7
1,527,790	-		GFF1500	0.33	+0.7
1,527,800	-		GFF1500	0.34	+0.8
1,527,826	-		GFF1500	0.35	+0.0
1,527,829	+		GFF1500	0.35	-0.3
1,527,829	+		GFF1500	0.35	+0.3
1,527,835	+		GFF1500	0.36	+0.1
1,527,843	-		GFF1500	0.36	+0.7
1,527,858	+		GFF1500	0.37	-1.3
1,527,858	+		GFF1500	0.37	+0.5
1,527,858	+		GFF1500	0.37	+0.2
1,527,858	+		GFF1500	0.37	+0.5
1,527,858	+		GFF1500	0.37	+0.6
1,527,866	-		GFF1500	0.37	+0.3
1,527,880	+		GFF1500	0.38	+0.6
1,527,888	-		GFF1500	0.38	-0.3
1,527,889	+		GFF1500	0.39	-1.3
1,527,899	+		GFF1500	0.39	-0.8
1,527,899	+		GFF1500	0.39	-0.6
1,527,899	+		GFF1500	0.39	+0.5
1,527,899	+		GFF1500	0.39	-2.5
1,527,899	+		GFF1500	0.39	-0.2
1,527,899	+		GFF1500	0.39	-0.5
1,527,899	+		GFF1500	0.39	+0.2
1,527,907	-		GFF1500	0.39	-0.5
1,527,907	-		GFF1500	0.39	-0.6
1,527,907	-		GFF1500	0.39	-0.4
1,527,907	-		GFF1500	0.39	+1.0
1,527,907	-		GFF1500	0.39	-0.3
1,527,909	-		GFF1500	0.40	-1.4
1,527,953	-		GFF1500	0.42	-0.4
1,527,958	-		GFF1500	0.42	+0.2
1,527,971	+		GFF1500	0.43	+0.0
1,527,971	+		GFF1500	0.43	+0.7
1,527,971	+		GFF1500	0.43	-1.0
1,527,976	+		GFF1500	0.43	+0.5
1,527,979	-		GFF1500	0.43	-0.5
1,527,984	-		GFF1500	0.44	-0.1
1,527,984	-		GFF1500	0.44	+0.2
1,528,007	+		GFF1500	0.45	-1.9
1,528,015	-		GFF1500	0.45	+1.0
1,528,077	+		GFF1500	0.48	-1.3
1,528,077	+		GFF1500	0.48	-0.7
1,528,085	-		GFF1500	0.49	-0.3
1,528,112	+		GFF1500	0.50	-0.1