Strain Fitness in Sphingobium sp. HT1-2 around GFF1387

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,410,657	+		GFF1386	0.61	-1.2
1,410,720	+		GFF1386	0.64	-0.4
1,410,720	+		GFF1386	0.64	-1.5
1,410,720	+		GFF1386	0.64	-2.1
1,410,721	-		GFF1386	0.64	+0.4
1,410,760	-		GFF1386	0.66	+0.8
1,410,761	+		GFF1386	0.66	-1.5
1,410,784	-		GFF1386	0.67	-0.4
1,410,787	-		GFF1386	0.67	+0.5
1,410,789	-		GFF1386	0.67	+1.7
1,410,817	+		GFF1386	0.68	-0.9
1,410,817	+		GFF1386	0.68	-0.9
1,410,825	-		GFF1386	0.68	-0.1
1,410,825	-		GFF1386	0.68	+0.4
1,410,825	-		GFF1386	0.68	+0.3
1,410,825	-		GFF1386	0.68	-0.5
1,410,827	-		GFF1386	0.69	-0.3
1,410,834	+		GFF1386	0.69	+1.0
1,410,842	-		GFF1386	0.69	+0.2
1,410,873	+		GFF1386	0.70	-2.3
1,410,891	-		GFF1386	0.71	-1.1
1,410,911	+		GFF1386	0.72	+0.4
1,410,916	+		GFF1386	0.72	+0.3
1,410,936	+		GFF1386	0.73	+0.6
1,410,936	+		GFF1386	0.73	-1.0
1,410,961	+		GFF1386	0.74	-2.3
1,410,961	+		GFF1386	0.74	-1.0
1,410,961	+		GFF1386	0.74	-0.3
1,410,968	+		GFF1386	0.74	-0.2
1,410,968	+		GFF1386	0.74	-0.2
1,410,969	-		GFF1386	0.74	+0.5
1,410,969	-		GFF1386	0.74	-0.2
1,410,976	-		GFF1386	0.75	+0.3
1,410,976	-		GFF1386	0.75	-0.4
1,410,998	+		GFF1386	0.76	-1.5
1,410,998	+		GFF1386	0.76	-2.1
1,410,998	+		GFF1386	0.76	+0.5
1,410,998	+		GFF1386	0.76	-1.0
1,410,998	+		GFF1386	0.76	-0.7
1,411,006	-		GFF1386	0.76	+0.7
1,411,007	-		GFF1386	0.76	-1.1
1,411,008	-		GFF1386	0.76	-1.3
1,411,052	+		GFF1386	0.78	+0.6
1,411,060	+		GFF1386	0.78	-1.3
1,411,110	+		GFF1386	0.80	+0.9
1,411,116	+		GFF1386	0.80	-0.2
1,411,135	+		GFF1386	0.81	+0.8
1,411,135	+		GFF1386	0.81	+0.5
1,411,135	+		GFF1386	0.81	-1.0
1,411,135	+		GFF1386	0.81	+0.1
1,411,135	+		GFF1386	0.81	+1.0
1,411,135	+		GFF1386	0.81	-0.7
1,411,135	+		GFF1386	0.81	-2.3
1,411,135	+		GFF1386	0.81	-1.2
1,411,136	-		GFF1386	0.81	-1.8
1,411,143	-		GFF1386	0.82	-0.4
1,411,143	-		GFF1386	0.82	-0.3
1,411,143	-		GFF1386	0.82	-1.0
1,411,143	-		GFF1386	0.82	-0.9
1,411,143	-		GFF1386	0.82	+0.9
1,411,143	-		GFF1386	0.82	-0.6
1,411,143	-		GFF1386	0.82	-0.5
1,411,143	-		GFF1386	0.82	+0.4
1,411,143	-		GFF1386	0.82	-0.3
1,411,143	-		GFF1386	0.82	+0.6
1,411,143	-		GFF1386	0.82	+0.5
1,411,143	-		GFF1386	0.82	-0.6
1,411,148	+		GFF1386	0.82	-1.6
1,411,148	+		GFF1386	0.82	-0.8
1,411,148	+		GFF1386	0.82	-2.3
1,411,156	-		GFF1386	0.82	-1.1
1,411,156	-		GFF1386	0.82	-0.9
1,411,162	-		GFF1386	0.82	-1.5
1,411,170	-		GFF1386	0.83	+0.9
1,411,178	+		GFF1386	0.83	+0.2
1,411,210	+		GFF1386	0.84	-0.4
1,411,210	+		GFF1386	0.84	-1.4
1,411,217	+		GFF1386	0.85	+0.4
1,411,217	+		GFF1386	0.85	-0.7
1,411,229	-		GFF1386	0.85	+0.4
1,411,230	-		GFF1386	0.85	-0.3
1,411,232	+		GFF1386	0.85	+0.0
1,411,240	-		GFF1386	0.86	+0.8
1,411,251	-		GFF1386	0.86	+0.3
1,411,264	+		GFF1386	0.87	+1.2
1,411,267	-		GFF1386	0.87	-1.4
1,411,269	+		GFF1386	0.87	+0.8
1,411,269	+		GFF1386	0.87	-0.1
1,411,269	+		GFF1386	0.87	+0.8
1,411,269	+		GFF1386	0.87	+1.0
1,411,269	+		GFF1386	0.87	-1.1
1,411,269	+		GFF1386	0.87	-1.3
1,411,269	+		GFF1386	0.87	+0.1
1,411,269	+		GFF1386	0.87	+0.3
1,411,269	+		GFF1386	0.87	-0.7
1,411,269	+		GFF1386	0.87	-1.2
1,411,269	+		GFF1386	0.87	-0.7
1,411,277	-		GFF1386	0.87	-1.5
1,411,277	-		GFF1386	0.87	-0.3
1,411,277	-		GFF1386	0.87	-1.2
1,411,277	-		GFF1386	0.87	-1.1
1,411,286	+		GFF1386	0.88	-1.0
1,411,291	+		GFF1386	0.88	-1.2
1,411,299	+		GFF1386	0.88	+1.4
1,411,299	+		GFF1386	0.88	+0.6
1,411,299	+		GFF1386	0.88	-0.3
1,411,299	+		GFF1386	0.88	-0.2
1,411,299	-		GFF1386	0.88	+0.3
1,411,307	-		GFF1386	0.88	-0.7
1,411,307	-		GFF1386	0.88	+0.2
1,411,307	-		GFF1386	0.88	-2.3
1,411,307	-		GFF1386	0.88	+0.7
1,411,307	-		GFF1386	0.88	+0.0
1,411,307	-		GFF1386	0.88	-2.0
1,411,307	-		GFF1386	0.88	+1.0
1,411,307	-		GFF1386	0.88	-0.2
1,411,312	-		GFF1386	0.89	-0.5
1,411,312	-		GFF1386	0.89	-0.1
1,411,358	+				+0.3
1,411,358	+				-0.1
1,411,366	-				-0.3
1,411,366	-				-0.4
1,411,366	-				-1.0
1,411,413	+				-0.1
1,411,454	+				+0.7
1,411,459	+				-0.7
1,411,459	+				+1.0
1,411,459	+				-0.4
1,411,459	+				-1.5
1,411,459	+				+0.1
1,411,459	+				-0.8
1,411,459	+				+1.0
1,411,459	+				+0.2
1,411,459	+				+1.0
1,411,459	+				+0.7
1,411,459	+				-2.1
1,411,467	-				-0.5
1,411,467	-				+1.4
1,411,467	-				-0.1
1,411,467	-				-1.0
1,411,467	-				-1.1
1,411,467	-				+1.3
1,411,467	-				+0.7
1,411,467	-				+1.1
1,411,467	-				-0.2
1,411,467	-				-0.2
1,411,471	+				+0.7
1,411,471	+				+0.6
1,411,471	+				-0.5
1,411,471	+				-0.2
1,411,472	-				+0.0
1,411,479	-				+1.7
1,411,479	-				-1.1
1,411,479	-				-0.2
1,411,479	-				-1.6
1,411,479	-				-0.6
1,411,484	-				-2.4
1,411,491	+				-0.9
1,411,493	+				-0.7
1,411,525	-				-0.1
1,411,536	+				+0.1
1,411,542	-				-0.1
1,411,544	-				-0.7
1,411,544	-				-1.7
1,411,544	-				-0.0
1,411,544	-				+0.4
1,411,630	-				-0.1
1,411,652	+				-0.9
1,411,652	+				+0.6
1,411,652	+				-0.9
1,411,660	-				+1.6
1,411,663	+				-1.4
1,411,663	+				-0.7
1,411,671	-				-0.5
1,411,671	-				-0.7
1,411,671	-				+0.1
1,411,671	-				+0.1
1,411,671	-				-0.3
1,411,671	-				-2.6
1,411,681	+				-0.3
1,411,686	+				-0.4
1,411,694	+				+1.2
1,411,702	-				-0.2
1,411,719	-		GFF1387	0.11	-0.2
1,411,755	-		GFF1387	0.16	+0.7
1,411,794	-		GFF1387	0.21	-0.3
1,411,794	-		GFF1387	0.21	-0.1
1,411,830	-		GFF1387	0.26	+1.0
1,411,832	-		GFF1387	0.26	-0.3
1,411,841	+		GFF1387	0.28	-0.7
1,411,841	+		GFF1387	0.28	-0.4
1,411,841	+		GFF1387	0.28	+0.7
1,411,841	+		GFF1387	0.28	+0.4
1,411,841	+		GFF1387	0.28	-1.7
1,411,841	+		GFF1387	0.28	-0.6
1,411,841	+		GFF1387	0.28	+0.9
1,411,841	+		GFF1387	0.28	-1.4
1,411,841	+		GFF1387	0.28	-0.2
1,411,841	+		GFF1387	0.28	+0.1
1,411,841	+		GFF1387	0.28	+0.8
1,411,849	-		GFF1387	0.29	-1.6
1,411,849	-		GFF1387	0.29	+0.1
1,411,849	-		GFF1387	0.29	-0.6
1,411,849	-		GFF1387	0.29	+0.3
1,411,849	-		GFF1387	0.29	+0.2
1,411,849	-		GFF1387	0.29	-1.7
1,411,849	-		GFF1387	0.29	-0.6
1,411,849	-		GFF1387	0.29	+0.6
1,411,849	-		GFF1387	0.29	-1.1
1,411,849	-		GFF1387	0.29	-0.7
1,411,849	-		GFF1387	0.29	-0.3
1,411,849	-		GFF1387	0.29	+0.0
1,411,853	+		GFF1387	0.29	+0.4
1,411,853	+		GFF1387	0.29	-0.5
1,411,854	-		GFF1387	0.29	+0.5
1,411,856	-		GFF1387	0.30	-1.4
1,411,856	-		GFF1387	0.30	+0.5
1,411,858	+		GFF1387	0.30	+0.9
1,411,861	-		GFF1387	0.30	-0.3
1,411,879	+		GFF1387	0.33	-0.4
1,411,879	-		GFF1387	0.33	+0.0
1,411,912	-		GFF1387	0.38	-1.0
1,411,920	+		GFF1387	0.39	+0.4
1,411,945	+		GFF1387	0.42	+0.0
1,411,945	+		GFF1387	0.42	-1.7
1,411,951	+		GFF1387	0.43	-0.2
1,411,953	-		GFF1387	0.43	-0.1
1,411,965	+		GFF1387	0.45	+0.3
1,411,966	+		GFF1387	0.45	-0.2
1,411,971	+		GFF1387	0.46	+0.3
1,411,971	+		GFF1387	0.46	+0.7
1,411,979	-		GFF1387	0.47	-1.6
1,412,008	+		GFF1387	0.51	-1.2
1,412,008	+		GFF1387	0.51	-2.7
1,412,008	+		GFF1387	0.51	+0.3
1,412,011	-		GFF1387	0.51	-1.4
1,412,016	-		GFF1387	0.52	+0.1
1,412,016	-		GFF1387	0.52	+0.7
1,412,021	-		GFF1387	0.53	-1.4
1,412,024	+		GFF1387	0.53	-1.2
1,412,026	+		GFF1387	0.53	-0.7
1,412,043	-		GFF1387	0.56	+0.1
1,412,059	+		GFF1387	0.58	-0.3
1,412,059	+		GFF1387	0.58	-1.9
1,412,059	+		GFF1387	0.58	-0.4
1,412,059	+		GFF1387	0.58	-0.4
1,412,060	-		GFF1387	0.58	-2.1
1,412,067	-		GFF1387	0.59	+0.6
1,412,067	-		GFF1387	0.59	-0.6
1,412,067	-		GFF1387	0.59	+0.0
1,412,067	-		GFF1387	0.59	+0.5
1,412,097	+		GFF1387	0.63	-0.7
1,412,097	+		GFF1387	0.63	-0.1
1,412,097	+		GFF1387	0.63	+0.3
1,412,104	-		GFF1387	0.64	-1.4
1,412,105	-		GFF1387	0.64	+0.3
1,412,105	-		GFF1387	0.64	-0.6
1,412,105	-		GFF1387	0.64	-0.9
1,412,112	+		GFF1387	0.65	+0.2
1,412,115	-		GFF1387	0.66	+0.9
1,412,117	+		GFF1387	0.66	-0.6
1,412,120	+		GFF1387	0.66	-1.1
1,412,129	+		GFF1387	0.68	-0.0
1,412,149	+		GFF1387	0.70	-0.4
1,412,158	-		GFF1387	0.72	-2.4
1,412,162	+		GFF1387	0.72	-0.9
1,412,162	+		GFF1387	0.72	+0.6
1,412,162	+		GFF1387	0.72	-1.3
1,412,170	-		GFF1387	0.73	-0.7
1,412,184	+		GFF1387	0.75	+1.3
1,412,184	+		GFF1387	0.75	-0.2
1,412,255	-		GFF1387	0.85	+0.6
1,412,255	-		GFF1387	0.85	-0.2
1,412,257	+		GFF1387	0.85	-0.7
1,412,266	+		GFF1387	0.87	-0.5
1,412,274	-		GFF1387	0.88	+1.7
1,412,294	+				-1.0
1,412,302	-				-0.6
1,412,310	-				+1.0
1,412,336	+				-0.7
1,412,344	-				-0.8
1,412,399	+				+0.5
1,412,421	-				-0.6
1,412,455	-				-1.2
1,412,456	+				-0.4
1,412,510	-				-0.2
1,412,510	-				+0.2
1,412,519	-				-0.6
1,412,533	+				-0.5
1,412,533	+				+0.2
1,412,561	+		GFF1388	0.10	-0.2
1,412,565	+		GFF1388	0.11	-1.5
1,412,624	+		GFF1388	0.16	+1.1
1,412,632	-		GFF1388	0.17	-0.2
1,412,632	-		GFF1388	0.17	+0.0
1,412,632	-		GFF1388	0.17	-0.4
1,412,694	-		GFF1388	0.23	+0.8
1,412,695	-		GFF1388	0.23	-0.1
1,412,696	+		GFF1388	0.23	+0.4
1,412,696	+		GFF1388	0.23	-0.8
1,412,701	+		GFF1388	0.24	-1.9
1,412,704	-		GFF1388	0.24	-0.2
1,412,704	-		GFF1388	0.24	+0.7
1,412,704	-		GFF1388	0.24	+0.6
1,412,709	-		GFF1388	0.25	-1.1
1,412,709	-		GFF1388	0.25	-0.2
1,412,744	-		GFF1388	0.28	-0.6
1,412,748	+		GFF1388	0.28	-1.7
1,412,749	+		GFF1388	0.29	-0.9
1,412,755	+		GFF1388	0.29	-0.1
1,412,755	+		GFF1388	0.29	+0.0
1,412,755	+		GFF1388	0.29	-0.6
1,412,756	-		GFF1388	0.29	+0.4
1,412,776	+		GFF1388	0.31	-0.2
1,412,776	+		GFF1388	0.31	-0.8
1,412,776	+		GFF1388	0.31	-0.6
1,412,784	-		GFF1388	0.32	+0.0
1,412,798	+		GFF1388	0.33	-2.2
1,412,798	+		GFF1388	0.33	+0.3
1,412,798	+		GFF1388	0.33	+0.8
1,412,806	-		GFF1388	0.34	-1.9
1,412,813	-		GFF1388	0.35	-0.6
1,412,842	+		GFF1388	0.38	+0.5
1,412,842	+		GFF1388	0.38	-0.3
1,412,842	+		GFF1388	0.38	+0.1
1,412,842	+		GFF1388	0.38	-1.6
1,412,842	-		GFF1388	0.38	-0.0
1,412,844	-		GFF1388	0.38	+0.2
1,412,849	-		GFF1388	0.38	+0.2
1,412,849	-		GFF1388	0.38	-1.2
1,412,860	-		GFF1388	0.39	+0.3
1,412,897	+		GFF1388	0.43	-1.4
1,412,900	-		GFF1388	0.43	-0.2
1,412,905	-		GFF1388	0.44	-2.1
1,413,000	-		GFF1388	0.53	-1.4
1,413,000	-		GFF1388	0.53	-0.4
1,413,011	+		GFF1388	0.54	-0.1
1,413,011	+		GFF1388	0.54	+1.1
1,413,016	+		GFF1388	0.55	-1.7
1,413,019	-		GFF1388	0.55	-1.3
1,413,019	-		GFF1388	0.55	-0.2
1,413,019	-		GFF1388	0.55	-1.1
1,413,025	-		GFF1388	0.56	-0.0
1,413,037	+		GFF1388	0.57	+0.3
1,413,037	+		GFF1388	0.57	+0.7
1,413,037	+		GFF1388	0.57	-0.1
1,413,037	+		GFF1388	0.57	+0.2
1,413,037	+		GFF1388	0.57	-0.5
1,413,037	+		GFF1388	0.57	+0.8
1,413,042	+		GFF1388	0.57	-0.8
1,413,042	+		GFF1388	0.57	+1.3
1,413,045	-		GFF1388	0.57	-0.8
1,413,045	-		GFF1388	0.57	-0.9
1,413,069	-		GFF1388	0.60	-0.8
1,413,101	-		GFF1388	0.63	-0.0
1,413,105	+		GFF1388	0.63	-0.7
1,413,105	+		GFF1388	0.63	+0.4
1,413,105	+		GFF1388	0.63	+0.3
1,413,105	+		GFF1388	0.63	+0.3
1,413,105	+		GFF1388	0.63	+0.2
1,413,105	+		GFF1388	0.63	+1.1
1,413,105	+		GFF1388	0.63	+0.3
1,413,105	+		GFF1388	0.63	+0.2
1,413,105	+		GFF1388	0.63	-0.9
1,413,105	+		GFF1388	0.63	-0.1
1,413,113	-		GFF1388	0.64	-1.1
1,413,113	-		GFF1388	0.64	-0.5
1,413,113	-		GFF1388	0.64	+1.1
1,413,113	-		GFF1388	0.64	-0.2
1,413,113	-		GFF1388	0.64	-1.2
1,413,113	-		GFF1388	0.64	+1.4
1,413,113	-		GFF1388	0.64	+0.0
1,413,113	-		GFF1388	0.64	-1.6
1,413,113	-		GFF1388	0.64	+0.1
1,413,122	-		GFF1388	0.65	+1.3
1,413,141	+		GFF1388	0.67	+1.3
1,413,141	+		GFF1388	0.67	-0.0
1,413,148	+		GFF1388	0.68	-0.2
1,413,161	-		GFF1388	0.69	-1.5
1,413,169	+		GFF1388	0.70	-1.5
1,413,192	-		GFF1388	0.72	-0.6
1,413,192	-		GFF1388	0.72	+0.2
1,413,196	-		GFF1388	0.72	-0.1
1,413,196	-		GFF1388	0.72	-1.4
1,413,196	-		GFF1388	0.72	+0.8
1,413,248	+		GFF1388	0.77	-0.1
1,413,256	-		GFF1388	0.78	-0.9
1,413,268	+		GFF1388	0.79	+0.4
1,413,276	-		GFF1388	0.80	-1.1
1,413,308	+		GFF1388	0.83	-0.1
1,413,314	+		GFF1388	0.84	-0.7
1,413,314	+		GFF1388	0.84	-0.8
1,413,321	+		GFF1388	0.84	-0.4
1,413,322	-		GFF1388	0.85	-1.3
1,413,336	-		GFF1388	0.86	-1.9
1,413,361	-		GFF1388	0.88	-1.5