Strain Fitness in Sphingobium sp. HT1-2 around GFF1208

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,226,680	-		GFF1207	0.68	+1.0
1,226,690	-		GFF1207	0.69	+0.2
1,226,694	+		GFF1207	0.69	-1.0
1,226,766	+		GFF1207	0.71	+0.6
1,226,777	+		GFF1207	0.72	-0.7
1,226,785	-		GFF1207	0.72	-0.5
1,226,788	+		GFF1207	0.72	+0.6
1,226,788	+		GFF1207	0.72	-1.4
1,226,788	+		GFF1207	0.72	+0.8
1,226,788	+		GFF1207	0.72	-0.9
1,226,788	+		GFF1207	0.72	-1.5
1,226,793	+		GFF1207	0.72	-2.1
1,226,793	+		GFF1207	0.72	-0.6
1,226,793	+		GFF1207	0.72	-0.6
1,226,793	+		GFF1207	0.72	+1.5
1,226,793	+		GFF1207	0.72	+0.5
1,226,793	+		GFF1207	0.72	-2.8
1,226,796	-		GFF1207	0.72	+0.5
1,226,796	-		GFF1207	0.72	-0.6
1,226,796	-		GFF1207	0.72	-2.1
1,226,796	-		GFF1207	0.72	+0.6
1,226,796	-		GFF1207	0.72	-0.1
1,226,798	+		GFF1207	0.72	-1.3
1,226,801	-		GFF1207	0.72	+0.1
1,226,801	-		GFF1207	0.72	-2.6
1,226,801	-		GFF1207	0.72	-1.2
1,226,801	-		GFF1207	0.72	-1.1
1,226,801	-		GFF1207	0.72	+0.1
1,226,801	-		GFF1207	0.72	+0.6
1,226,806	-		GFF1207	0.73	-1.2
1,226,806	-		GFF1207	0.73	-1.4
1,226,812	+		GFF1207	0.73	-1.1
1,226,819	-		GFF1207	0.73	-0.3
1,226,840	+		GFF1207	0.74	-1.2
1,226,840	+		GFF1207	0.74	-0.5
1,226,840	+		GFF1207	0.74	+1.2
1,226,886	-		GFF1207	0.75	-0.5
1,226,905	+		GFF1207	0.76	+0.3
1,226,913	+		GFF1207	0.76	+0.6
1,226,930	+		GFF1207	0.77	-0.8
1,226,959	-		GFF1207	0.78	-0.6
1,226,966	+		GFF1207	0.78	-1.5
1,226,976	+		GFF1207	0.78	-1.6
1,226,976	-		GFF1207	0.78	+0.3
1,226,982	+		GFF1207	0.79	-0.2
1,227,015	+		GFF1207	0.80	-0.2
1,227,017	+		GFF1207	0.80	-0.9
1,227,020	+		GFF1207	0.80	+0.3
1,227,040	+		GFF1207	0.81	-0.8
1,227,044	-		GFF1207	0.81	-0.6
1,227,044	-		GFF1207	0.81	+0.7
1,227,048	-		GFF1207	0.81	+0.1
1,227,078	-		GFF1207	0.82	+0.1
1,227,085	-		GFF1207	0.82	-0.6
1,227,085	-		GFF1207	0.82	+0.0
1,227,114	+		GFF1207	0.83	+0.1
1,227,122	-		GFF1207	0.84	-0.7
1,227,124	-		GFF1207	0.84	+0.7
1,227,131	+		GFF1207	0.84	-1.2
1,227,139	-		GFF1207	0.84	+0.3
1,227,193	+		GFF1207	0.86	-0.0
1,227,203	-		GFF1207	0.86	-0.8
1,227,211	+		GFF1207	0.87	-0.5
1,227,211	+		GFF1207	0.87	+0.2
1,227,224	+		GFF1207	0.87	+0.2
1,227,232	-		GFF1207	0.87	-1.9
1,227,244	-		GFF1207	0.88	-0.3
1,227,287	-		GFF1207	0.89	-0.1
1,227,296	+		GFF1207	0.89	-1.2
1,227,299	+		GFF1207	0.90	-1.4
1,227,302	+		GFF1207	0.90	-0.8
1,227,309	+		GFF1207	0.90	-0.4
1,227,309	+		GFF1207	0.90	-1.2
1,227,324	+				-1.2
1,227,331	+				-0.5
1,227,363	+				-0.2
1,227,450	-				-1.3
1,227,452	+				+0.4
1,227,453	+				+0.6
1,227,455	-				+0.5
1,227,483	-				+0.4
1,227,504	+				+0.1
1,227,514	-				-1.9
1,227,521	+				-0.9
1,227,530	+				-0.2
1,227,551	+				+0.5
1,227,553	+				-0.7
1,227,559	+				-0.1
1,227,561	-				-0.2
1,227,567	-				-0.4
1,227,569	+				-1.8
1,227,596	+				-0.3
1,227,601	+				+0.9
1,227,618	+				+0.9
1,227,618	+				-0.8
1,227,618	+				-0.9
1,227,618	+				-0.2
1,227,623	+				-0.6
1,227,626	-				+0.4
1,227,628	+				+0.4
1,227,628	+				-1.7
1,227,628	+				+1.1
1,227,631	-				-0.2
1,227,636	-				+0.6
1,227,636	-				-0.6
1,227,636	-				-0.4
1,227,636	-				-0.8
1,227,641	-				+0.7
1,227,659	+				+0.1
1,227,659	+				-0.9
1,227,664	+				+0.7
1,227,670	-				-0.8
1,227,680	-				-0.4
1,227,680	-				+1.2
1,227,680	-				-0.0
1,227,682	+				-0.1
1,227,682	+				-0.6
1,227,682	+				+0.6
1,227,700	-				+0.9
1,227,720	-				+1.3
1,227,790	-				-3.0
1,227,798	+				-0.3
1,227,806	+				+1.2
1,227,806	+				+1.1
1,227,814	-				-0.2
1,227,824	+				-1.1
1,227,829	+				-0.8
1,227,829	+				-0.6
1,227,829	+				-1.8
1,227,829	+				-0.3
1,227,829	+				-0.2
1,227,829	+				-0.2
1,227,829	+				-1.0
1,227,829	+				-0.2
1,227,829	+				-1.2
1,227,834	+				-1.3
1,227,837	-				-1.2
1,227,837	-				+0.0
1,227,837	-				-0.5
1,227,837	-				+0.8
1,227,837	-				+0.5
1,227,839	+				+0.3
1,227,841	+		GFF1208	0.10	-0.6
1,227,843	+		GFF1208	0.10	-1.4
1,227,849	-		GFF1208	0.11	-0.5
1,227,849	-		GFF1208	0.11	+0.6
1,227,882	+		GFF1208	0.13	-0.4
1,227,888	-		GFF1208	0.13	-1.1
1,227,913	+		GFF1208	0.14	-1.6
1,227,918	+		GFF1208	0.15	+0.5
1,227,921	-		GFF1208	0.15	+0.8
1,227,945	+		GFF1208	0.16	+0.1
1,227,945	+		GFF1208	0.16	-1.0
1,227,958	-		GFF1208	0.17	-2.6
1,227,982	-		GFF1208	0.19	-0.7
1,228,000	+		GFF1208	0.20	+0.5
1,228,014	-		GFF1208	0.21	+0.7
1,228,028	+		GFF1208	0.21	-1.3
1,228,084	-		GFF1208	0.25	+1.1
1,228,089	+		GFF1208	0.25	-1.8
1,228,090	-		GFF1208	0.25	-0.6
1,228,094	+		GFF1208	0.25	-1.1
1,228,099	+		GFF1208	0.26	-0.5
1,228,105	+		GFF1208	0.26	-1.0
1,228,107	-		GFF1208	0.26	+0.5
1,228,131	-		GFF1208	0.28	-1.7
1,228,136	-		GFF1208	0.28	-2.5
1,228,136	-		GFF1208	0.28	-1.1
1,228,168	-		GFF1208	0.30	-0.1
1,228,168	-		GFF1208	0.30	-2.0
1,228,195	+		GFF1208	0.32	-0.3
1,228,208	+		GFF1208	0.32	+0.0
1,228,208	+		GFF1208	0.32	-0.8
1,228,240	+		GFF1208	0.34	-0.7
1,228,263	-		GFF1208	0.36	-2.3
1,228,263	-		GFF1208	0.36	-0.5
1,228,282	+		GFF1208	0.37	+0.1
1,228,282	+		GFF1208	0.37	-1.1
1,228,282	+		GFF1208	0.37	+0.9
1,228,338	+		GFF1208	0.40	-1.6
1,228,338	+		GFF1208	0.40	+1.6
1,228,338	+		GFF1208	0.40	-0.1
1,228,338	+		GFF1208	0.40	-0.6
1,228,343	+		GFF1208	0.40	-0.1
1,228,372	+		GFF1208	0.42	-0.2
1,228,375	-		GFF1208	0.42	-1.4
1,228,377	+		GFF1208	0.43	-2.7
1,228,377	+		GFF1208	0.43	+1.3
1,228,377	+		GFF1208	0.43	+0.1
1,228,377	+		GFF1208	0.43	+0.1
1,228,377	+		GFF1208	0.43	-0.7
1,228,377	+		GFF1208	0.43	-1.6
1,228,377	+		GFF1208	0.43	+0.6
1,228,377	+		GFF1208	0.43	-1.4
1,228,377	+		GFF1208	0.43	-0.2
1,228,377	+		GFF1208	0.43	+1.3
1,228,377	+		GFF1208	0.43	+0.9
1,228,377	+		GFF1208	0.43	-0.9
1,228,377	+		GFF1208	0.43	+0.5
1,228,377	+		GFF1208	0.43	+1.1
1,228,380	-		GFF1208	0.43	-0.2
1,228,384	+		GFF1208	0.43	+0.6
1,228,384	+		GFF1208	0.43	-0.2
1,228,384	+		GFF1208	0.43	-0.3
1,228,384	+		GFF1208	0.43	-0.7
1,228,385	+		GFF1208	0.43	-1.2
1,228,385	-		GFF1208	0.43	+0.3
1,228,385	-		GFF1208	0.43	+0.9
1,228,385	-		GFF1208	0.43	+0.2
1,228,385	-		GFF1208	0.43	+0.1
1,228,385	-		GFF1208	0.43	+0.7
1,228,385	-		GFF1208	0.43	+0.2
1,228,385	-		GFF1208	0.43	+0.3
1,228,385	-		GFF1208	0.43	+0.8
1,228,385	-		GFF1208	0.43	+0.1
1,228,385	-		GFF1208	0.43	-1.0
1,228,385	-		GFF1208	0.43	+0.9
1,228,385	-		GFF1208	0.43	-1.2
1,228,392	-		GFF1208	0.43	-0.9
1,228,405	+		GFF1208	0.44	-0.5
1,228,423	+		GFF1208	0.45	-1.8
1,228,423	-		GFF1208	0.45	-1.7
1,228,428	+		GFF1208	0.46	+0.1
1,228,428	+		GFF1208	0.46	+0.1
1,228,441	-		GFF1208	0.46	-0.9
1,228,441	-		GFF1208	0.46	-0.3
1,228,444	+		GFF1208	0.47	+0.3
1,228,444	+		GFF1208	0.47	-0.0
1,228,444	+		GFF1208	0.47	-2.0
1,228,444	+		GFF1208	0.47	-1.1
1,228,444	+		GFF1208	0.47	+0.3
1,228,444	+		GFF1208	0.47	+0.6
1,228,444	+		GFF1208	0.47	-1.6
1,228,444	+		GFF1208	0.47	+0.3
1,228,444	+		GFF1208	0.47	+0.1
1,228,444	+		GFF1208	0.47	+0.0
1,228,444	+		GFF1208	0.47	-1.8
1,228,444	+		GFF1208	0.47	-0.2
1,228,444	+		GFF1208	0.47	-2.6
1,228,444	+		GFF1208	0.47	-0.1
1,228,444	+		GFF1208	0.47	+0.0
1,228,444	+		GFF1208	0.47	-1.0
1,228,444	+		GFF1208	0.47	-0.4
1,228,444	+		GFF1208	0.47	-1.5
1,228,444	+		GFF1208	0.47	+0.2
1,228,444	+		GFF1208	0.47	-0.2
1,228,444	+		GFF1208	0.47	-1.2
1,228,444	+		GFF1208	0.47	-0.4
1,228,444	+		GFF1208	0.47	-2.1
1,228,444	+		GFF1208	0.47	-0.8
1,228,444	+		GFF1208	0.47	-0.6
1,228,444	+		GFF1208	0.47	+0.4
1,228,444	+		GFF1208	0.47	-0.1
1,228,444	+		GFF1208	0.47	-0.8
1,228,452	-		GFF1208	0.47	+0.3
1,228,452	-		GFF1208	0.47	-1.0
1,228,452	-		GFF1208	0.47	-0.6
1,228,452	-		GFF1208	0.47	-0.1
1,228,452	-		GFF1208	0.47	+0.5
1,228,452	-		GFF1208	0.47	-0.4
1,228,452	-		GFF1208	0.47	+1.5
1,228,452	-		GFF1208	0.47	-1.2
1,228,452	-		GFF1208	0.47	-0.2
1,228,452	-		GFF1208	0.47	+0.5
1,228,452	-		GFF1208	0.47	-1.9
1,228,452	-		GFF1208	0.47	+0.6
1,228,452	-		GFF1208	0.47	-2.3
1,228,452	-		GFF1208	0.47	+0.4
1,228,452	-		GFF1208	0.47	-0.4
1,228,452	-		GFF1208	0.47	-1.2
1,228,452	-		GFF1208	0.47	+0.2
1,228,452	-		GFF1208	0.47	-0.2
1,228,452	-		GFF1208	0.47	+0.0
1,228,452	-		GFF1208	0.47	-0.4
1,228,452	-		GFF1208	0.47	-1.9
1,228,452	-		GFF1208	0.47	-1.1
1,228,452	-		GFF1208	0.47	-0.1
1,228,452	-		GFF1208	0.47	-0.4
1,228,452	-		GFF1208	0.47	-1.2
1,228,452	-		GFF1208	0.47	-0.1
1,228,452	-		GFF1208	0.47	-0.7
1,228,452	-		GFF1208	0.47	-0.3
1,228,452	-		GFF1208	0.47	-1.6
1,228,452	-		GFF1208	0.47	-1.5
1,228,452	-		GFF1208	0.47	-1.5
1,228,452	-		GFF1208	0.47	-1.4
1,228,452	-		GFF1208	0.47	-0.7
1,228,452	-		GFF1208	0.47	-1.4
1,228,452	-		GFF1208	0.47	-0.4
1,228,452	-		GFF1208	0.47	+0.3
1,228,452	-		GFF1208	0.47	-0.7
1,228,452	-		GFF1208	0.47	-2.0
1,228,452	-		GFF1208	0.47	-2.2
1,228,452	-		GFF1208	0.47	-0.5
1,228,452	-		GFF1208	0.47	-1.5
1,228,452	-		GFF1208	0.47	+0.5
1,228,452	-		GFF1208	0.47	+0.3
1,228,454	+		GFF1208	0.47	-0.5
1,228,454	+		GFF1208	0.47	-0.8
1,228,454	+		GFF1208	0.47	+0.3
1,228,454	+		GFF1208	0.47	+0.8
1,228,454	+		GFF1208	0.47	+0.0
1,228,454	+		GFF1208	0.47	-0.4
1,228,454	+		GFF1208	0.47	-1.0
1,228,461	+		GFF1208	0.48	+0.1
1,228,462	+		GFF1208	0.48	+0.4
1,228,466	+		GFF1208	0.48	-1.0
1,228,466	+		GFF1208	0.48	+0.6
1,228,466	+		GFF1208	0.48	-0.3
1,228,466	+		GFF1208	0.48	+0.7
1,228,474	-		GFF1208	0.48	+0.2
1,228,474	-		GFF1208	0.48	-0.3
1,228,479	-		GFF1208	0.49	+0.1
1,228,490	+		GFF1208	0.49	-0.5
1,228,498	-		GFF1208	0.50	-1.1
1,228,498	-		GFF1208	0.50	+0.8
1,228,504	+		GFF1208	0.50	-2.0
1,228,504	+		GFF1208	0.50	-2.4
1,228,507	-		GFF1208	0.50	+0.5
1,228,507	-		GFF1208	0.50	-0.9
1,228,512	-		GFF1208	0.51	+0.6
1,228,512	-		GFF1208	0.51	+0.4
1,228,512	-		GFF1208	0.51	-0.7
1,228,520	-		GFF1208	0.51	+0.4
1,228,577	-		GFF1208	0.55	-0.1
1,228,590	+		GFF1208	0.55	-2.1
1,228,595	+		GFF1208	0.56	-0.2
1,228,595	+		GFF1208	0.56	-0.2
1,228,605	+		GFF1208	0.56	+0.0
1,228,608	+		GFF1208	0.57	+0.5
1,228,608	-		GFF1208	0.57	+0.9
1,228,615	+		GFF1208	0.57	+0.5
1,228,615	+		GFF1208	0.57	-0.9
1,228,615	+		GFF1208	0.57	-0.1
1,228,615	+		GFF1208	0.57	+1.0
1,228,623	-		GFF1208	0.57	-0.0
1,228,623	-		GFF1208	0.57	-0.1
1,228,623	-		GFF1208	0.57	-0.8
1,228,623	-		GFF1208	0.57	-1.8
1,228,623	-		GFF1208	0.57	+0.2
1,228,637	-		GFF1208	0.58	-0.7
1,228,637	-		GFF1208	0.58	-0.8
1,228,640	+		GFF1208	0.59	+0.4
1,228,640	+		GFF1208	0.59	-0.5
1,228,646	+		GFF1208	0.59	+1.1
1,228,646	+		GFF1208	0.59	-2.2
1,228,648	-		GFF1208	0.59	-1.4
1,228,658	-		GFF1208	0.60	-0.1
1,228,658	-		GFF1208	0.60	-0.0
1,228,658	-		GFF1208	0.60	-1.5
1,228,658	-		GFF1208	0.60	+0.1
1,228,659	-		GFF1208	0.60	-1.2
1,228,669	+		GFF1208	0.60	-0.5
1,228,676	-		GFF1208	0.61	-1.7
1,228,686	-		GFF1208	0.61	-2.2
1,228,710	+		GFF1208	0.63	+0.1
1,228,718	-		GFF1208	0.63	-1.7
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