Strain Fitness in Sphingobium sp. HT1-2 around GFF1203

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,217,430	-		GFF1201	0.71	+0.4
1,217,430	-		GFF1201	0.71	-1.9
1,217,447	+		GFF1201	0.72	-2.3
1,217,455	-		GFF1201	0.72	-1.2
1,217,474	-		GFF1201	0.73	-0.4
1,217,484	-		GFF1201	0.74	+1.3
1,217,495	+		GFF1201	0.75	+0.1
1,217,517	-		GFF1201	0.76	+0.8
1,217,529	+		GFF1201	0.76	-0.2
1,217,529	+		GFF1201	0.76	-1.6
1,217,537	-		GFF1201	0.77	-0.9
1,217,544	+		GFF1201	0.77	+0.3
1,217,552	-		GFF1201	0.78	+0.9
1,217,590	-		GFF1201	0.80	+0.6
1,217,616	+		GFF1201	0.81	-0.9
1,217,621	+		GFF1201	0.82	-0.9
1,217,621	+		GFF1201	0.82	+0.2
1,217,621	+		GFF1201	0.82	-0.4
1,217,629	+		GFF1201	0.82	-0.6
1,217,629	+		GFF1201	0.82	-0.1
1,217,629	+		GFF1201	0.82	-0.3
1,217,629	+		GFF1201	0.82	-0.9
1,217,629	+		GFF1201	0.82	+0.4
1,217,629	-		GFF1201	0.82	-0.2
1,217,629	-		GFF1201	0.82	-0.5
1,217,629	-		GFF1201	0.82	-0.9
1,217,631	+		GFF1201	0.82	+1.7
1,217,635	+		GFF1201	0.82	+1.2
1,217,637	-		GFF1201	0.82	+0.2
1,217,637	-		GFF1201	0.82	-0.7
1,217,643	-		GFF1201	0.83	-0.2
1,217,698	-		GFF1201	0.86	+0.4
1,217,711	-		GFF1201	0.87	+0.8
1,217,748	+		GFF1201	0.89	-1.3
1,217,748	+		GFF1201	0.89	-1.9
1,217,748	+		GFF1201	0.89	-0.3
1,217,756	-		GFF1201	0.89	-0.7
1,217,785	+				-1.6
1,217,796	+				-1.2
1,217,799	-				-3.3
1,217,804	-				+1.2
1,217,814	+				-1.2
1,217,843	+				-0.2
1,217,843	+				-0.5
1,217,843	+				-0.3
1,217,856	+				-0.8
1,217,885	+				+0.2
1,217,885	+				-0.3
1,217,893	-				-1.3
1,217,895	+				-2.1
1,217,922	-				-0.4
1,217,922	-				-0.4
1,217,926	+				-1.1
1,217,932	+				+0.1
1,217,963	+				-1.5
1,217,967	+				-0.9
1,217,975	-				-0.4
1,217,977	+				-0.0
1,217,977	+				-1.5
1,217,977	+				+0.2
1,217,980	-				+0.4
1,217,982	+				-0.6
1,217,985	-				-0.4
1,217,993	-		GFF1202	0.11	-0.5
1,217,995	-		GFF1202	0.11	+0.6
1,217,995	-		GFF1202	0.11	-1.3
1,217,995	-		GFF1202	0.11	-0.1
1,217,995	-		GFF1202	0.11	+0.3
1,218,013	+		GFF1202	0.15	-0.4
1,218,051	+		GFF1202	0.23	-0.7
1,218,055	-		GFF1202	0.24	+0.2
1,218,059	+		GFF1202	0.25	-1.5
1,218,102	-		GFF1202	0.34	-0.6
1,218,110	+		GFF1202	0.35	-1.0
1,218,120	+		GFF1202	0.37	+0.5
1,218,120	+		GFF1202	0.37	-0.2
1,218,123	-		GFF1202	0.38	-2.2
1,218,123	-		GFF1202	0.38	+0.4
1,218,127	+		GFF1202	0.39	-0.5
1,218,127	+		GFF1202	0.39	-1.1
1,218,135	-		GFF1202	0.40	+0.1
1,218,135	-		GFF1202	0.40	-0.7
1,218,146	+		GFF1202	0.43	+0.7
1,218,154	-		GFF1202	0.44	-0.1
1,218,154	-		GFF1202	0.44	-0.2
1,218,172	-		GFF1202	0.48	-0.2
1,218,172	-		GFF1202	0.48	-1.0
1,218,173	+		GFF1202	0.48	-1.2
1,218,175	+		GFF1202	0.49	-1.2
1,218,183	-		GFF1202	0.50	-0.6
1,218,183	-		GFF1202	0.50	+0.0
1,218,219	-		GFF1202	0.58	-0.4
1,218,222	+		GFF1202	0.58	+0.2
1,218,230	-		GFF1202	0.60	+1.1
1,218,283	-		GFF1202	0.71	-0.6
1,218,292	-		GFF1202	0.73	-1.2
1,218,301	+		GFF1202	0.75	-0.6
1,218,301	+		GFF1202	0.75	+0.3
1,218,340	+		GFF1202	0.83	+0.8
1,218,342	+		GFF1202	0.83	-2.3
1,218,342	+		GFF1202	0.83	+0.8
1,218,342	+		GFF1202	0.83	+0.5
1,218,342	+		GFF1202	0.83	-0.3
1,218,342	+		GFF1202	0.83	+0.4
1,218,342	+		GFF1202	0.83	+0.3
1,218,342	+		GFF1202	0.83	-0.1
1,218,342	+		GFF1202	0.83	+0.7
1,218,349	-		GFF1202	0.85	+0.9
1,218,350	-		GFF1202	0.85	-0.3
1,218,350	-		GFF1202	0.85	-1.3
1,218,350	-		GFF1202	0.85	-0.7
1,218,350	-		GFF1202	0.85	+1.0
1,218,350	-		GFF1202	0.85	+0.6
1,218,350	-		GFF1202	0.85	-2.9
1,218,350	-		GFF1202	0.85	-0.9
1,218,350	-		GFF1202	0.85	-0.9
1,218,350	-		GFF1202	0.85	-0.7
1,218,364	+		GFF1202	0.88	+1.0
1,218,371	-		GFF1202	0.89	-1.2
1,218,382	+				-0.5
1,218,406	-				-1.3
1,218,430	+				-0.8
1,218,461	-				-0.9
1,218,482	+				-1.0
1,218,484	+				-1.4
1,218,542	+				-2.3
1,218,549	+				-0.6
1,218,549	+				-2.2
1,218,549	+				-1.2
1,218,549	+				+0.4
1,218,549	+				-0.9
1,218,550	-				-1.2
1,218,557	-				-1.3
1,218,557	-				-0.5
1,218,557	-				-0.2
1,218,568	+				-0.5
1,218,576	+				+0.1
1,218,593	+		GFF1203	0.11	+0.0
1,218,593	+		GFF1203	0.11	+1.2
1,218,593	+		GFF1203	0.11	+0.6
1,218,593	+		GFF1203	0.11	-1.6
1,218,593	+		GFF1203	0.11	-0.6
1,218,593	+		GFF1203	0.11	-0.6
1,218,598	+		GFF1203	0.11	-0.4
1,218,598	+		GFF1203	0.11	-0.1
1,218,601	+		GFF1203	0.12	-0.1
1,218,601	-		GFF1203	0.12	-0.3
1,218,601	-		GFF1203	0.12	+0.6
1,218,601	-		GFF1203	0.12	-1.0
1,218,601	-		GFF1203	0.12	+0.1
1,218,607	+		GFF1203	0.12	+0.6
1,218,622	+		GFF1203	0.13	-1.4
1,218,631	-		GFF1203	0.14	-1.2
1,218,635	-		GFF1203	0.14	-1.2
1,218,648	-		GFF1203	0.15	+0.1
1,218,674	-		GFF1203	0.16	-2.1
1,218,674	-		GFF1203	0.16	-2.1
1,218,674	-		GFF1203	0.16	-1.2
1,218,681	+		GFF1203	0.17	-0.3
1,218,683	+		GFF1203	0.17	+0.3
1,218,686	+		GFF1203	0.17	+0.5
1,218,689	-		GFF1203	0.17	-1.5
1,218,689	-		GFF1203	0.17	+0.2
1,218,689	-		GFF1203	0.17	+0.2
1,218,689	-		GFF1203	0.17	-0.0
1,218,691	+		GFF1203	0.18	+0.5
1,218,691	+		GFF1203	0.18	+0.3
1,218,712	-		GFF1203	0.19	-1.1
1,218,717	+		GFF1203	0.19	-1.6
1,218,717	+		GFF1203	0.19	-0.4
1,218,717	+		GFF1203	0.19	-0.4
1,218,717	+		GFF1203	0.19	-0.4
1,218,717	+		GFF1203	0.19	+0.4
1,218,717	+		GFF1203	0.19	-0.1
1,218,717	+		GFF1203	0.19	+0.4
1,218,717	+		GFF1203	0.19	-0.8
1,218,719	-		GFF1203	0.19	+0.2
1,218,725	-		GFF1203	0.20	-0.8
1,218,725	-		GFF1203	0.20	-1.6
1,218,725	-		GFF1203	0.20	+0.1
1,218,725	-		GFF1203	0.20	-2.0
1,218,725	-		GFF1203	0.20	-0.9
1,218,725	-		GFF1203	0.20	+0.7
1,218,725	-		GFF1203	0.20	+0.3
1,218,725	-		GFF1203	0.20	+0.1
1,218,725	-		GFF1203	0.20	-1.3
1,218,750	-		GFF1203	0.22	+1.6
1,218,754	+		GFF1203	0.22	-2.1
1,218,767	+		GFF1203	0.23	-0.2
1,218,800	-		GFF1203	0.25	-0.2
1,218,804	-		GFF1203	0.25	-1.6
1,218,825	-		GFF1203	0.27	+0.3
1,218,825	-		GFF1203	0.27	-0.4
1,218,830	+		GFF1203	0.27	+0.7
1,218,839	-		GFF1203	0.28	+0.3
1,218,850	+		GFF1203	0.28	-1.8
1,218,850	+		GFF1203	0.28	-1.7
1,218,858	-		GFF1203	0.29	-1.9
1,218,858	-		GFF1203	0.29	-0.3
1,218,858	-		GFF1203	0.29	-1.1
1,218,858	-		GFF1203	0.29	-0.6
1,218,858	-		GFF1203	0.29	-1.3
1,218,883	+		GFF1203	0.30	-0.2
1,218,883	+		GFF1203	0.30	-0.5
1,218,886	-		GFF1203	0.31	+0.1
1,218,891	-		GFF1203	0.31	+1.0
1,218,891	-		GFF1203	0.31	-1.7
1,218,891	-		GFF1203	0.31	+0.5
1,218,891	-		GFF1203	0.31	+0.5
1,218,895	+		GFF1203	0.31	-0.2
1,218,905	+		GFF1203	0.32	-0.1
1,218,906	+		GFF1203	0.32	+1.1
1,218,906	+		GFF1203	0.32	-1.8
1,218,906	+		GFF1203	0.32	-2.2
1,218,914	-		GFF1203	0.33	-0.5
1,218,914	-		GFF1203	0.33	+1.3
1,218,914	-		GFF1203	0.33	-0.4
1,218,914	-		GFF1203	0.33	+0.5
1,218,914	-		GFF1203	0.33	-0.3
1,218,914	-		GFF1203	0.33	-0.8
1,218,921	-		GFF1203	0.33	+0.1
1,218,928	+		GFF1203	0.33	+0.6
1,218,939	+		GFF1203	0.34	+0.2
1,218,939	+		GFF1203	0.34	-0.2
1,218,970	+		GFF1203	0.36	-0.2
1,218,973	-		GFF1203	0.36	-1.9
1,218,978	-		GFF1203	0.37	-0.5
1,218,978	-		GFF1203	0.37	-1.4
1,218,978	-		GFF1203	0.37	+0.2
1,218,999	+		GFF1203	0.38	-0.8
1,219,007	-		GFF1203	0.39	+0.6
1,219,007	-		GFF1203	0.39	-0.7
1,219,012	-		GFF1203	0.39	-0.1
1,219,012	-		GFF1203	0.39	-0.3
1,219,014	-		GFF1203	0.39	+1.5
1,219,035	+		GFF1203	0.41	-0.5
1,219,038	-		GFF1203	0.41	+0.6
1,219,043	-		GFF1203	0.41	-1.7
1,219,048	+		GFF1203	0.41	+0.0
1,219,049	+		GFF1203	0.42	-0.4
1,219,056	-		GFF1203	0.42	-0.3
1,219,056	-		GFF1203	0.42	-1.1
1,219,071	-		GFF1203	0.43	-0.6
1,219,093	+		GFF1203	0.45	-0.6
1,219,093	-		GFF1203	0.45	+0.1
1,219,099	-		GFF1203	0.45	-0.5
1,219,101	-		GFF1203	0.45	+0.1
1,219,101	-		GFF1203	0.45	+0.6
1,219,130	+		GFF1203	0.47	+0.3
1,219,130	+		GFF1203	0.47	+0.5
1,219,130	+		GFF1203	0.47	-0.5
1,219,130	+		GFF1203	0.47	+1.0
1,219,130	+		GFF1203	0.47	-0.7
1,219,135	+		GFF1203	0.47	-0.1
1,219,138	-		GFF1203	0.48	-1.8
1,219,138	-		GFF1203	0.48	-1.5
1,219,138	-		GFF1203	0.48	+0.8
1,219,138	-		GFF1203	0.48	-0.1
1,219,138	-		GFF1203	0.48	+0.5
1,219,143	-		GFF1203	0.48	+0.2
1,219,159	-		GFF1203	0.49	+0.6
1,219,160	+		GFF1203	0.49	-1.6
1,219,160	-		GFF1203	0.49	-0.4
1,219,178	-		GFF1203	0.50	+0.3
1,219,185	+		GFF1203	0.51	+0.3
1,219,185	+		GFF1203	0.51	-2.7
1,219,214	-		GFF1203	0.53	+1.0
1,219,232	+		GFF1203	0.54	-0.2
1,219,233	+		GFF1203	0.54	+0.5
1,219,233	+		GFF1203	0.54	-1.5
1,219,236	-		GFF1203	0.54	-0.5
1,219,240	-		GFF1203	0.54	-0.3
1,219,254	+		GFF1203	0.55	+0.0
1,219,314	+		GFF1203	0.59	-0.5
1,219,314	+		GFF1203	0.59	+0.3
1,219,320	-		GFF1203	0.60	-0.6
1,219,322	-		GFF1203	0.60	-1.5
1,219,323	+		GFF1203	0.60	-0.9
1,219,333	+		GFF1203	0.61	+0.6
1,219,341	-		GFF1203	0.61	-0.6
1,219,344	+		GFF1203	0.61	-1.0
1,219,352	-		GFF1203	0.62	-0.8
1,219,362	-		GFF1203	0.63	-0.4
1,219,370	-		GFF1203	0.63	-0.0
1,219,378	-		GFF1203	0.64	+0.8
1,219,389	+		GFF1203	0.64	+0.9
1,219,411	+		GFF1203	0.66	+0.5
1,219,411	+		GFF1203	0.66	-1.1
1,219,411	+		GFF1203	0.66	+0.3
1,219,411	+		GFF1203	0.66	+0.2
1,219,411	+		GFF1203	0.66	-0.8
1,219,411	+		GFF1203	0.66	+0.7
1,219,411	+		GFF1203	0.66	-0.8
1,219,411	+		GFF1203	0.66	-0.8
1,219,419	-		GFF1203	0.66	-0.9
1,219,419	-		GFF1203	0.66	-1.5
1,219,425	+		GFF1203	0.67	+0.4
1,219,438	-		GFF1203	0.68	+1.0
1,219,464	+		GFF1203	0.69	-0.7
1,219,464	+		GFF1203	0.69	-1.5
1,219,472	-		GFF1203	0.70	+0.9
1,219,472	-		GFF1203	0.70	+0.2
1,219,472	-		GFF1203	0.70	-0.7
1,219,478	-		GFF1203	0.70	-0.9
1,219,478	-		GFF1203	0.70	-0.2
1,219,478	-		GFF1203	0.70	-0.7
1,219,479	-		GFF1203	0.70	-1.1
1,219,491	+		GFF1203	0.71	-0.8
1,219,491	+		GFF1203	0.71	+0.4
1,219,491	+		GFF1203	0.71	-0.2
1,219,491	+		GFF1203	0.71	+1.5
1,219,491	+		GFF1203	0.71	+0.2
1,219,491	+		GFF1203	0.71	-0.5
1,219,499	-		GFF1203	0.72	-0.9
1,219,499	-		GFF1203	0.72	+1.1
1,219,499	-		GFF1203	0.72	-0.4
1,219,499	-		GFF1203	0.72	+0.4
1,219,499	-		GFF1203	0.72	+0.1
1,219,499	-		GFF1203	0.72	-0.8
1,219,499	-		GFF1203	0.72	-1.5
1,219,508	-		GFF1203	0.72	-0.6
1,219,521	+		GFF1203	0.73	-1.1
1,219,521	+		GFF1203	0.73	+1.0
1,219,537	+		GFF1203	0.74	+0.4
1,219,537	+		GFF1203	0.74	-0.6
1,219,540	-		GFF1203	0.74	-1.5
1,219,542	+		GFF1203	0.75	+1.1
1,219,556	-		GFF1203	0.76	-1.2
1,219,561	+		GFF1203	0.76	+0.1
1,219,571	+		GFF1203	0.77	+0.2
1,219,571	+		GFF1203	0.77	+0.4
1,219,577	+		GFF1203	0.77	-0.5
1,219,579	-		GFF1203	0.77	-2.8
1,219,621	-		GFF1203	0.80	+0.1
1,219,625	-		GFF1203	0.80	+0.7
1,219,625	-		GFF1203	0.80	-1.2
1,219,627	+		GFF1203	0.80	+1.2
1,219,628	+		GFF1203	0.80	+0.6
1,219,635	-		GFF1203	0.81	-0.7
1,219,635	-		GFF1203	0.81	+0.4
1,219,635	-		GFF1203	0.81	+0.9
1,219,635	-		GFF1203	0.81	+1.0
1,219,640	+		GFF1203	0.81	+0.2
1,219,640	+		GFF1203	0.81	+0.6
1,219,648	-		GFF1203	0.82	-1.2
1,219,673	-		GFF1203	0.83	-0.8
1,219,697	+		GFF1203	0.85	+0.6
1,219,711	+		GFF1203	0.86	+0.2
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