Strain Fitness in Sphingobium sp. HT1-2 around GFF1202

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,216,955	-		GFF1201	0.45	-0.9
1,216,969	+		GFF1201	0.45	-0.7
1,216,983	-		GFF1201	0.46	-0.7
1,216,994	+		GFF1201	0.47	-0.3
1,216,994	+		GFF1201	0.47	+1.0
1,216,994	+		GFF1201	0.47	-0.4
1,216,994	+		GFF1201	0.47	+0.6
1,216,994	+		GFF1201	0.47	-0.2
1,216,994	+		GFF1201	0.47	-0.4
1,216,997	-		GFF1201	0.47	-0.2
1,217,002	-		GFF1201	0.47	-0.3
1,217,002	-		GFF1201	0.47	+0.2
1,217,002	-		GFF1201	0.47	-0.1
1,217,002	-		GFF1201	0.47	-0.8
1,217,002	-		GFF1201	0.47	-0.4
1,217,010	+		GFF1201	0.48	+0.8
1,217,011	-		GFF1201	0.48	-0.2
1,217,015	+		GFF1201	0.48	-0.2
1,217,020	+		GFF1201	0.48	+0.7
1,217,024	-		GFF1201	0.48	-1.9
1,217,024	-		GFF1201	0.48	-0.3
1,217,028	-		GFF1201	0.49	+0.3
1,217,038	+		GFF1201	0.49	-0.8
1,217,051	+		GFF1201	0.50	+1.4
1,217,094	-		GFF1201	0.52	+0.2
1,217,119	-		GFF1201	0.54	-1.4
1,217,164	-		GFF1201	0.56	-2.6
1,217,186	+		GFF1201	0.57	-2.7
1,217,191	+		GFF1201	0.58	-1.1
1,217,191	+		GFF1201	0.58	-0.3
1,217,196	+		GFF1201	0.58	-1.0
1,217,199	-		GFF1201	0.58	+0.6
1,217,199	-		GFF1201	0.58	+1.2
1,217,230	+		GFF1201	0.60	-0.4
1,217,230	+		GFF1201	0.60	-0.4
1,217,302	+		GFF1201	0.64	+0.8
1,217,302	+		GFF1201	0.64	-0.5
1,217,302	+		GFF1201	0.64	-0.9
1,217,302	+		GFF1201	0.64	+0.1
1,217,302	+		GFF1201	0.64	-0.1
1,217,302	+		GFF1201	0.64	-1.7
1,217,302	+		GFF1201	0.64	-0.0
1,217,302	+		GFF1201	0.64	+0.6
1,217,302	+		GFF1201	0.64	-0.6
1,217,302	+		GFF1201	0.64	+1.1
1,217,302	+		GFF1201	0.64	+0.1
1,217,302	+		GFF1201	0.64	+0.2
1,217,302	+		GFF1201	0.64	+0.5
1,217,302	+		GFF1201	0.64	+0.6
1,217,302	+		GFF1201	0.64	+1.1
1,217,302	+		GFF1201	0.64	+0.5
1,217,303	+		GFF1201	0.64	-0.2
1,217,304	+		GFF1201	0.64	-0.1
1,217,310	-		GFF1201	0.64	-0.4
1,217,310	-		GFF1201	0.64	-0.5
1,217,310	-		GFF1201	0.64	+0.7
1,217,310	-		GFF1201	0.64	-0.3
1,217,310	-		GFF1201	0.64	+0.2
1,217,310	-		GFF1201	0.64	-0.4
1,217,310	-		GFF1201	0.64	-1.9
1,217,310	-		GFF1201	0.64	+0.6
1,217,310	-		GFF1201	0.64	-0.5
1,217,315	+		GFF1201	0.65	-0.7
1,217,318	-		GFF1201	0.65	+0.4
1,217,318	-		GFF1201	0.65	-1.5
1,217,320	+		GFF1201	0.65	-0.3
1,217,325	+		GFF1201	0.65	-0.8
1,217,335	-		GFF1201	0.66	-0.7
1,217,341	+		GFF1201	0.66	-0.5
1,217,345	-		GFF1201	0.66	-1.6
1,217,349	+		GFF1201	0.66	-0.1
1,217,349	+		GFF1201	0.66	+0.6
1,217,349	+		GFF1201	0.66	-1.1
1,217,349	+		GFF1201	0.66	-0.2
1,217,349	+		GFF1201	0.66	-1.4
1,217,349	+		GFF1201	0.66	-0.1
1,217,349	+		GFF1201	0.66	+0.2
1,217,349	+		GFF1201	0.66	-0.2
1,217,349	+		GFF1201	0.66	-0.9
1,217,349	+		GFF1201	0.66	+0.2
1,217,349	+		GFF1201	0.66	+0.1
1,217,349	+		GFF1201	0.66	-1.7
1,217,349	+		GFF1201	0.66	+1.3
1,217,349	+		GFF1201	0.66	+0.8
1,217,349	+		GFF1201	0.66	+0.4
1,217,349	+		GFF1201	0.66	-1.2
1,217,349	+		GFF1201	0.66	-2.4
1,217,349	+		GFF1201	0.66	-1.5
1,217,349	+		GFF1201	0.66	+0.6
1,217,349	+		GFF1201	0.66	-0.8
1,217,349	+		GFF1201	0.66	-0.2
1,217,349	+		GFF1201	0.66	+0.1
1,217,349	-		GFF1201	0.66	+1.0
1,217,357	-		GFF1201	0.67	-0.4
1,217,357	-		GFF1201	0.67	-2.5
1,217,357	-		GFF1201	0.67	+0.1
1,217,357	-		GFF1201	0.67	-0.2
1,217,357	-		GFF1201	0.67	-0.2
1,217,357	-		GFF1201	0.67	+0.9
1,217,357	-		GFF1201	0.67	-0.2
1,217,357	-		GFF1201	0.67	+0.0
1,217,357	-		GFF1201	0.67	-0.5
1,217,357	-		GFF1201	0.67	-1.9
1,217,357	-		GFF1201	0.67	+1.1
1,217,357	-		GFF1201	0.67	+0.3
1,217,357	-		GFF1201	0.67	+0.4
1,217,357	-		GFF1201	0.67	+0.0
1,217,357	-		GFF1201	0.67	+0.1
1,217,357	-		GFF1201	0.67	+0.3
1,217,357	-		GFF1201	0.67	+0.1
1,217,357	-		GFF1201	0.67	-0.8
1,217,357	-		GFF1201	0.67	-0.2
1,217,357	-		GFF1201	0.67	-1.6
1,217,374	+		GFF1201	0.68	-0.7
1,217,386	-		GFF1201	0.68	+0.6
1,217,388	+		GFF1201	0.69	+0.7
1,217,403	+		GFF1201	0.69	+0.3
1,217,406	-		GFF1201	0.70	-1.4
1,217,413	+		GFF1201	0.70	-0.4
1,217,422	+		GFF1201	0.70	+0.5
1,217,430	-		GFF1201	0.71	+0.4
1,217,430	-		GFF1201	0.71	-1.9
1,217,447	+		GFF1201	0.72	-2.3
1,217,455	-		GFF1201	0.72	-1.2
1,217,474	-		GFF1201	0.73	-0.4
1,217,484	-		GFF1201	0.74	+1.3
1,217,495	+		GFF1201	0.75	+0.1
1,217,517	-		GFF1201	0.76	+0.8
1,217,529	+		GFF1201	0.76	-0.2
1,217,529	+		GFF1201	0.76	-1.6
1,217,537	-		GFF1201	0.77	-0.9
1,217,544	+		GFF1201	0.77	+0.3
1,217,552	-		GFF1201	0.78	+0.9
1,217,590	-		GFF1201	0.80	+0.6
1,217,616	+		GFF1201	0.81	-0.9
1,217,621	+		GFF1201	0.82	-0.9
1,217,621	+		GFF1201	0.82	+0.2
1,217,621	+		GFF1201	0.82	-0.4
1,217,629	+		GFF1201	0.82	-0.6
1,217,629	+		GFF1201	0.82	-0.1
1,217,629	+		GFF1201	0.82	-0.3
1,217,629	+		GFF1201	0.82	-0.9
1,217,629	+		GFF1201	0.82	+0.4
1,217,629	-		GFF1201	0.82	-0.2
1,217,629	-		GFF1201	0.82	-0.5
1,217,629	-		GFF1201	0.82	-0.9
1,217,631	+		GFF1201	0.82	+1.7
1,217,635	+		GFF1201	0.82	+1.2
1,217,637	-		GFF1201	0.82	+0.2
1,217,637	-		GFF1201	0.82	-0.7
1,217,643	-		GFF1201	0.83	-0.2
1,217,698	-		GFF1201	0.86	+0.4
1,217,711	-		GFF1201	0.87	+0.8
1,217,748	+		GFF1201	0.89	-1.3
1,217,748	+		GFF1201	0.89	-1.9
1,217,748	+		GFF1201	0.89	-0.3
1,217,756	-		GFF1201	0.89	-0.7
1,217,785	+				-1.6
1,217,796	+				-1.2
1,217,799	-				-3.3
1,217,804	-				+1.2
1,217,814	+				-1.2
1,217,843	+				-0.2
1,217,843	+				-0.5
1,217,843	+				-0.3
1,217,856	+				-0.8
1,217,885	+				+0.2
1,217,885	+				-0.3
1,217,893	-				-1.3
1,217,895	+				-2.1
1,217,922	-				-0.4
1,217,922	-				-0.4
1,217,926	+				-1.1
1,217,932	+				+0.1
1,217,963	+				-1.5
1,217,967	+				-0.9
1,217,975	-				-0.4
1,217,977	+				-0.0
1,217,977	+				-1.5
1,217,977	+				+0.2
1,217,980	-				+0.4
1,217,982	+				-0.6
1,217,985	-				-0.4
1,217,993	-		GFF1202	0.11	-0.5
1,217,995	-		GFF1202	0.11	+0.6
1,217,995	-		GFF1202	0.11	-1.3
1,217,995	-		GFF1202	0.11	-0.1
1,217,995	-		GFF1202	0.11	+0.3
1,218,013	+		GFF1202	0.15	-0.4
1,218,051	+		GFF1202	0.23	-0.7
1,218,055	-		GFF1202	0.24	+0.2
1,218,059	+		GFF1202	0.25	-1.5
1,218,102	-		GFF1202	0.34	-0.6
1,218,110	+		GFF1202	0.35	-1.0
1,218,120	+		GFF1202	0.37	+0.5
1,218,120	+		GFF1202	0.37	-0.2
1,218,123	-		GFF1202	0.38	-2.2
1,218,123	-		GFF1202	0.38	+0.4
1,218,127	+		GFF1202	0.39	-0.5
1,218,127	+		GFF1202	0.39	-1.1
1,218,135	-		GFF1202	0.40	+0.1
1,218,135	-		GFF1202	0.40	-0.7
1,218,146	+		GFF1202	0.43	+0.7
1,218,154	-		GFF1202	0.44	-0.1
1,218,154	-		GFF1202	0.44	-0.2
1,218,172	-		GFF1202	0.48	-0.2
1,218,172	-		GFF1202	0.48	-1.0
1,218,173	+		GFF1202	0.48	-1.2
1,218,175	+		GFF1202	0.49	-1.2
1,218,183	-		GFF1202	0.50	-0.6
1,218,183	-		GFF1202	0.50	+0.0
1,218,219	-		GFF1202	0.58	-0.4
1,218,222	+		GFF1202	0.58	+0.2
1,218,230	-		GFF1202	0.60	+1.1
1,218,283	-		GFF1202	0.71	-0.6
1,218,292	-		GFF1202	0.73	-1.2
1,218,301	+		GFF1202	0.75	-0.6
1,218,301	+		GFF1202	0.75	+0.3
1,218,340	+		GFF1202	0.83	+0.8
1,218,342	+		GFF1202	0.83	-2.3
1,218,342	+		GFF1202	0.83	+0.8
1,218,342	+		GFF1202	0.83	+0.5
1,218,342	+		GFF1202	0.83	-0.3
1,218,342	+		GFF1202	0.83	+0.4
1,218,342	+		GFF1202	0.83	+0.3
1,218,342	+		GFF1202	0.83	-0.1
1,218,342	+		GFF1202	0.83	+0.7
1,218,349	-		GFF1202	0.85	+0.9
1,218,350	-		GFF1202	0.85	-0.3
1,218,350	-		GFF1202	0.85	-1.3
1,218,350	-		GFF1202	0.85	-0.7
1,218,350	-		GFF1202	0.85	+1.0
1,218,350	-		GFF1202	0.85	+0.6
1,218,350	-		GFF1202	0.85	-2.9
1,218,350	-		GFF1202	0.85	-0.9
1,218,350	-		GFF1202	0.85	-0.9
1,218,350	-		GFF1202	0.85	-0.7
1,218,364	+		GFF1202	0.88	+1.0
1,218,371	-		GFF1202	0.89	-1.2
1,218,382	+				-0.5
1,218,406	-				-1.3
1,218,430	+				-0.8
1,218,461	-				-0.9
1,218,482	+				-1.0
1,218,484	+				-1.4
1,218,542	+				-2.3
1,218,549	+				-0.6
1,218,549	+				-2.2
1,218,549	+				-1.2
1,218,549	+				+0.4
1,218,549	+				-0.9
1,218,550	-				-1.2
1,218,557	-				-1.3
1,218,557	-				-0.5
1,218,557	-				-0.2
1,218,568	+				-0.5
1,218,576	+				+0.1
1,218,593	+		GFF1203	0.11	+0.0
1,218,593	+		GFF1203	0.11	+1.2
1,218,593	+		GFF1203	0.11	+0.6
1,218,593	+		GFF1203	0.11	-1.6
1,218,593	+		GFF1203	0.11	-0.6
1,218,593	+		GFF1203	0.11	-0.6
1,218,598	+		GFF1203	0.11	-0.4
1,218,598	+		GFF1203	0.11	-0.1
1,218,601	+		GFF1203	0.12	-0.1
1,218,601	-		GFF1203	0.12	-0.3
1,218,601	-		GFF1203	0.12	+0.6
1,218,601	-		GFF1203	0.12	-1.0
1,218,601	-		GFF1203	0.12	+0.1
1,218,607	+		GFF1203	0.12	+0.6
1,218,622	+		GFF1203	0.13	-1.4
1,218,631	-		GFF1203	0.14	-1.2
1,218,635	-		GFF1203	0.14	-1.2
1,218,648	-		GFF1203	0.15	+0.1
1,218,674	-		GFF1203	0.16	-2.1
1,218,674	-		GFF1203	0.16	-2.1
1,218,674	-		GFF1203	0.16	-1.2
1,218,681	+		GFF1203	0.17	-0.3
1,218,683	+		GFF1203	0.17	+0.3
1,218,686	+		GFF1203	0.17	+0.5
1,218,689	-		GFF1203	0.17	-1.5
1,218,689	-		GFF1203	0.17	+0.2
1,218,689	-		GFF1203	0.17	+0.2
1,218,689	-		GFF1203	0.17	-0.0
1,218,691	+		GFF1203	0.18	+0.5
1,218,691	+		GFF1203	0.18	+0.3
1,218,712	-		GFF1203	0.19	-1.1
1,218,717	+		GFF1203	0.19	-1.6
1,218,717	+		GFF1203	0.19	-0.4
1,218,717	+		GFF1203	0.19	-0.4
1,218,717	+		GFF1203	0.19	-0.4
1,218,717	+		GFF1203	0.19	+0.4
1,218,717	+		GFF1203	0.19	-0.1
1,218,717	+		GFF1203	0.19	+0.4
1,218,717	+		GFF1203	0.19	-0.8
1,218,719	-		GFF1203	0.19	+0.2
1,218,725	-		GFF1203	0.20	-0.8
1,218,725	-		GFF1203	0.20	-1.6
1,218,725	-		GFF1203	0.20	+0.1
1,218,725	-		GFF1203	0.20	-2.0
1,218,725	-		GFF1203	0.20	-0.9
1,218,725	-		GFF1203	0.20	+0.7
1,218,725	-		GFF1203	0.20	+0.3
1,218,725	-		GFF1203	0.20	+0.1
1,218,725	-		GFF1203	0.20	-1.3
1,218,750	-		GFF1203	0.22	+1.6
1,218,754	+		GFF1203	0.22	-2.1
1,218,767	+		GFF1203	0.23	-0.2
1,218,800	-		GFF1203	0.25	-0.2
1,218,804	-		GFF1203	0.25	-1.6
1,218,825	-		GFF1203	0.27	+0.3
1,218,825	-		GFF1203	0.27	-0.4
1,218,830	+		GFF1203	0.27	+0.7
1,218,839	-		GFF1203	0.28	+0.3
1,218,850	+		GFF1203	0.28	-1.8
1,218,850	+		GFF1203	0.28	-1.7
1,218,858	-		GFF1203	0.29	-1.9
1,218,858	-		GFF1203	0.29	-0.3
1,218,858	-		GFF1203	0.29	-1.1
1,218,858	-		GFF1203	0.29	-0.6
1,218,858	-		GFF1203	0.29	-1.3
1,218,883	+		GFF1203	0.30	-0.2
1,218,883	+		GFF1203	0.30	-0.5
1,218,886	-		GFF1203	0.31	+0.1
1,218,891	-		GFF1203	0.31	+1.0
1,218,891	-		GFF1203	0.31	-1.7
1,218,891	-		GFF1203	0.31	+0.5
1,218,891	-		GFF1203	0.31	+0.5
1,218,895	+		GFF1203	0.31	-0.2
1,218,905	+		GFF1203	0.32	-0.1
1,218,906	+		GFF1203	0.32	+1.1
1,218,906	+		GFF1203	0.32	-1.8
1,218,906	+		GFF1203	0.32	-2.2
1,218,914	-		GFF1203	0.33	-0.5
1,218,914	-		GFF1203	0.33	+1.3
1,218,914	-		GFF1203	0.33	-0.4
1,218,914	-		GFF1203	0.33	+0.5
1,218,914	-		GFF1203	0.33	-0.3
1,218,914	-		GFF1203	0.33	-0.8
1,218,921	-		GFF1203	0.33	+0.1
1,218,928	+		GFF1203	0.33	+0.6
1,218,939	+		GFF1203	0.34	+0.2
1,218,939	+		GFF1203	0.34	-0.2
1,218,970	+		GFF1203	0.36	-0.2
1,218,973	-		GFF1203	0.36	-1.9
1,218,978	-		GFF1203	0.37	-0.5
1,218,978	-		GFF1203	0.37	-1.4
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1,219,012	-		GFF1203	0.39	-0.3
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1,219,043	-		GFF1203	0.41	-1.7
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1,219,185	+		GFF1203	0.51	-2.7
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1,219,411	+		GFF1203	0.66	-0.8
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1,219,419	-		GFF1203	0.66	-1.5