Strain Fitness in Sphingobium sp. HT1-2 around GFF1168

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,173,614	-		GFF1167	0.25	-1.3
1,173,617	+		GFF1167	0.25	-1.4
1,173,617	+		GFF1167	0.25	+0.0
1,173,617	+		GFF1167	0.25	+1.0
1,173,617	+		GFF1167	0.25	-1.3
1,173,617	+		GFF1167	0.25	-0.2
1,173,617	+		GFF1167	0.25	-0.2
1,173,617	+		GFF1167	0.25	+0.1
1,173,617	+		GFF1167	0.25	-1.8
1,173,617	+		GFF1167	0.25	+0.5
1,173,617	+		GFF1167	0.25	-0.2
1,173,617	+		GFF1167	0.25	-0.4
1,173,617	+		GFF1167	0.25	+1.7
1,173,617	+		GFF1167	0.25	-1.1
1,173,617	+		GFF1167	0.25	+0.8
1,173,625	-		GFF1167	0.25	+0.9
1,173,625	-		GFF1167	0.25	-0.8
1,173,625	-		GFF1167	0.25	+1.2
1,173,625	-		GFF1167	0.25	-0.7
1,173,625	-		GFF1167	0.25	-2.0
1,173,625	-		GFF1167	0.25	-0.8
1,173,625	-		GFF1167	0.25	+0.2
1,173,625	-		GFF1167	0.25	-0.5
1,173,625	-		GFF1167	0.25	+0.2
1,173,625	-		GFF1167	0.25	+0.3
1,173,625	-		GFF1167	0.25	-0.0
1,173,625	-		GFF1167	0.25	-1.1
1,173,625	-		GFF1167	0.25	+0.3
1,173,632	+		GFF1167	0.26	-0.2
1,173,635	+		GFF1167	0.26	+0.5
1,173,650	-		GFF1167	0.27	-2.5
1,173,666	-		GFF1167	0.28	-0.0
1,173,666	-		GFF1167	0.28	-0.6
1,173,668	+		GFF1167	0.29	+0.6
1,173,671	-		GFF1167	0.29	-0.4
1,173,674	+		GFF1167	0.29	-0.3
1,173,674	+		GFF1167	0.29	-2.5
1,173,674	+		GFF1167	0.29	-1.0
1,173,674	+		GFF1167	0.29	-2.0
1,173,677	-		GFF1167	0.29	+0.2
1,173,677	-		GFF1167	0.29	+1.0
1,173,677	-		GFF1167	0.29	+0.2
1,173,677	-		GFF1167	0.29	-0.5
1,173,682	-		GFF1167	0.30	-0.2
1,173,682	-		GFF1167	0.30	-2.2
1,173,682	-		GFF1167	0.30	-0.3
1,173,682	-		GFF1167	0.30	-0.4
1,173,682	-		GFF1167	0.30	+0.8
1,173,682	-		GFF1167	0.30	+0.1
1,173,689	+		GFF1167	0.30	-0.1
1,173,703	-		GFF1167	0.31	+0.7
1,173,704	+		GFF1167	0.31	+0.4
1,173,737	-		GFF1167	0.34	-0.2
1,173,748	+		GFF1167	0.35	-0.7
1,173,748	+		GFF1167	0.35	-2.2
1,173,777	+		GFF1167	0.37	-0.1
1,173,785	-		GFF1167	0.38	+0.4
1,173,785	-		GFF1167	0.38	-0.1
1,173,786	-		GFF1167	0.38	-0.2
1,173,793	+		GFF1167	0.38	-0.2
1,173,801	+		GFF1167	0.39	-0.2
1,173,801	-		GFF1167	0.39	-0.2
1,173,801	-		GFF1167	0.39	+0.4
1,173,801	-		GFF1167	0.39	+0.3
1,173,808	-		GFF1167	0.39	-0.5
1,173,826	-		GFF1167	0.41	+1.0
1,173,831	+		GFF1167	0.41	-1.5
1,173,831	+		GFF1167	0.41	-0.9
1,173,839	-		GFF1167	0.42	+0.6
1,173,839	-		GFF1167	0.42	-0.7
1,173,839	-		GFF1167	0.42	+1.0
1,173,873	+		GFF1167	0.44	-0.4
1,173,873	+		GFF1167	0.44	+0.7
1,173,873	+		GFF1167	0.44	+1.1
1,173,881	-		GFF1167	0.45	-0.4
1,173,881	-		GFF1167	0.45	-0.0
1,173,881	-		GFF1167	0.45	-2.1
1,173,881	-		GFF1167	0.45	-0.2
1,173,881	-		GFF1167	0.45	-0.8
1,173,883	+		GFF1167	0.45	+1.1
1,173,883	+		GFF1167	0.45	-0.7
1,173,944	+		GFF1167	0.50	-1.2
1,173,944	+		GFF1167	0.50	-1.7
1,173,944	+		GFF1167	0.50	-1.2
1,173,944	+		GFF1167	0.50	-0.5
1,173,944	+		GFF1167	0.50	-0.2
1,173,944	+		GFF1167	0.50	-0.0
1,173,944	+		GFF1167	0.50	+0.2
1,173,944	+		GFF1167	0.50	-0.8
1,173,944	+		GFF1167	0.50	-1.0
1,173,949	+		GFF1167	0.50	-0.6
1,173,952	-		GFF1167	0.50	+0.3
1,173,952	-		GFF1167	0.50	-0.6
1,173,952	-		GFF1167	0.50	-1.9
1,173,952	-		GFF1167	0.50	+1.1
1,173,962	-		GFF1167	0.51	+0.2
1,173,986	+		GFF1167	0.53	+0.9
1,173,994	-		GFF1167	0.54	-1.4
1,173,994	-		GFF1167	0.54	-2.2
1,174,025	+		GFF1167	0.56	-2.1
1,174,029	+		GFF1167	0.56	-0.2
1,174,029	+		GFF1167	0.56	-1.2
1,174,030	+		GFF1167	0.56	-1.1
1,174,030	+		GFF1167	0.56	-0.1
1,174,030	+		GFF1167	0.56	+1.0
1,174,037	-		GFF1167	0.57	-3.0
1,174,037	-		GFF1167	0.57	-0.8
1,174,037	-		GFF1167	0.57	-0.6
1,174,037	-		GFF1167	0.57	-0.7
1,174,038	-		GFF1167	0.57	-0.2
1,174,038	-		GFF1167	0.57	+0.2
1,174,049	+		GFF1167	0.58	-0.1
1,174,071	-		GFF1167	0.60	-1.0
1,174,093	-		GFF1167	0.61	+0.2
1,174,110	-		GFF1167	0.63	-2.1
1,174,122	-		GFF1167	0.64	-0.9
1,174,125	+		GFF1167	0.64	+0.7
1,174,132	+		GFF1167	0.64	+1.2
1,174,137	+		GFF1167	0.65	+0.4
1,174,137	+		GFF1167	0.65	-1.1
1,174,142	+		GFF1167	0.65	-1.1
1,174,145	-		GFF1167	0.65	-1.5
1,174,150	-		GFF1167	0.66	+1.6
1,174,163	+		GFF1167	0.67	-0.9
1,174,163	+		GFF1167	0.67	+0.9
1,174,163	+		GFF1167	0.67	-0.9
1,174,168	+		GFF1167	0.67	-1.5
1,174,171	-		GFF1167	0.67	-0.4
1,174,186	-		GFF1167	0.68	+0.2
1,174,191	-		GFF1167	0.69	+0.6
1,174,197	-		GFF1167	0.69	+0.5
1,174,211	+		GFF1167	0.70	-2.0
1,174,211	+		GFF1167	0.70	+0.3
1,174,211	+		GFF1167	0.70	-1.6
1,174,211	+		GFF1167	0.70	-2.1
1,174,211	+		GFF1167	0.70	+0.7
1,174,211	+		GFF1167	0.70	-0.5
1,174,211	+		GFF1167	0.70	-1.3
1,174,211	+		GFF1167	0.70	-0.3
1,174,219	-		GFF1167	0.71	+0.3
1,174,219	-		GFF1167	0.71	-2.1
1,174,219	-		GFF1167	0.71	+0.2
1,174,219	-		GFF1167	0.71	-0.7
1,174,219	-		GFF1167	0.71	-1.6
1,174,219	-		GFF1167	0.71	+0.5
1,174,219	-		GFF1167	0.71	+0.7
1,174,219	-		GFF1167	0.71	+0.4
1,174,219	-		GFF1167	0.71	+0.6
1,174,219	-		GFF1167	0.71	-1.4
1,174,219	-		GFF1167	0.71	-0.1
1,174,219	-		GFF1167	0.71	-0.8
1,174,219	-		GFF1167	0.71	-0.0
1,174,221	+		GFF1167	0.71	-1.7
1,174,221	+		GFF1167	0.71	-1.0
1,174,221	+		GFF1167	0.71	-1.7
1,174,221	+		GFF1167	0.71	+0.4
1,174,221	+		GFF1167	0.71	-0.6
1,174,221	+		GFF1167	0.71	+0.2
1,174,221	+		GFF1167	0.71	-0.1
1,174,221	+		GFF1167	0.71	-0.4
1,174,221	+		GFF1167	0.71	+0.1
1,174,221	+		GFF1167	0.71	-0.7
1,174,221	+		GFF1167	0.71	+0.8
1,174,221	+		GFF1167	0.71	+0.8
1,174,221	+		GFF1167	0.71	-0.7
1,174,221	+		GFF1167	0.71	-0.8
1,174,221	+		GFF1167	0.71	-0.6
1,174,229	-		GFF1167	0.72	-0.1
1,174,229	-		GFF1167	0.72	+0.2
1,174,229	-		GFF1167	0.72	-1.4
1,174,229	-		GFF1167	0.72	+0.5
1,174,229	-		GFF1167	0.72	-0.2
1,174,229	-		GFF1167	0.72	-0.9
1,174,229	-		GFF1167	0.72	+0.2
1,174,229	-		GFF1167	0.72	+0.4
1,174,229	-		GFF1167	0.72	-0.4
1,174,229	-		GFF1167	0.72	-1.2
1,174,229	-		GFF1167	0.72	-0.6
1,174,229	-		GFF1167	0.72	+0.8
1,174,229	-		GFF1167	0.72	-0.9
1,174,229	-		GFF1167	0.72	-0.7
1,174,229	-		GFF1167	0.72	-0.3
1,174,229	-		GFF1167	0.72	+0.7
1,174,229	-		GFF1167	0.72	-0.9
1,174,229	-		GFF1167	0.72	-0.7
1,174,229	-		GFF1167	0.72	-0.8
1,174,234	-		GFF1167	0.72	+0.9
1,174,239	-		GFF1167	0.73	+0.2
1,174,244	-		GFF1167	0.73	-0.7
1,174,252	-		GFF1167	0.74	-0.4
1,174,268	+		GFF1167	0.75	+0.5
1,174,269	+		GFF1167	0.75	+0.3
1,174,270	-		GFF1167	0.75	-0.1
1,174,277	-		GFF1167	0.75	+1.3
1,174,277	-		GFF1167	0.75	-0.8
1,174,287	+		GFF1167	0.76	-1.1
1,174,287	+		GFF1167	0.76	+0.3
1,174,287	+		GFF1167	0.76	-0.9
1,174,287	-		GFF1167	0.76	+0.3
1,174,295	-		GFF1167	0.77	-1.7
1,174,295	-		GFF1167	0.77	-0.7
1,174,295	-		GFF1167	0.77	-0.2
1,174,295	-		GFF1167	0.77	-0.5
1,174,295	-		GFF1167	0.77	-0.3
1,174,295	-		GFF1167	0.77	+0.2
1,174,297	+		GFF1167	0.77	+0.5
1,174,302	+		GFF1167	0.77	-1.7
1,174,302	+		GFF1167	0.77	-0.3
1,174,302	+		GFF1167	0.77	+0.1
1,174,302	+		GFF1167	0.77	+0.8
1,174,302	+		GFF1167	0.77	+1.2
1,174,302	+		GFF1167	0.77	+0.7
1,174,302	+		GFF1167	0.77	-0.2
1,174,305	-		GFF1167	0.78	-0.7
1,174,310	+		GFF1167	0.78	-2.2
1,174,310	-		GFF1167	0.78	-2.2
1,174,310	-		GFF1167	0.78	-0.5
1,174,310	-		GFF1167	0.78	-1.9
1,174,310	-		GFF1167	0.78	-1.0
1,174,310	-		GFF1167	0.78	+0.3
1,174,310	-		GFF1167	0.78	-0.4
1,174,310	-		GFF1167	0.78	-0.3
1,174,310	-		GFF1167	0.78	-1.4
1,174,310	-		GFF1167	0.78	+0.3
1,174,310	-		GFF1167	0.78	-1.1
1,174,310	-		GFF1167	0.78	-1.8
1,174,310	-		GFF1167	0.78	-1.4
1,174,310	-		GFF1167	0.78	-0.4
1,174,318	-		GFF1167	0.79	-0.7
1,174,326	+		GFF1167	0.79	-1.6
1,174,326	+		GFF1167	0.79	-0.4
1,174,335	+		GFF1167	0.80	-1.8
1,174,342	-		GFF1167	0.80	-0.2
1,174,382	+		GFF1167	0.83	+0.2
1,174,382	+		GFF1167	0.83	+0.4
1,174,387	+		GFF1167	0.84	-1.4
1,174,387	+		GFF1167	0.84	-0.9
1,174,390	-		GFF1167	0.84	+0.4
1,174,390	-		GFF1167	0.84	-1.6
1,174,395	-		GFF1167	0.84	-0.6
1,174,416	-		GFF1167	0.86	+0.8
1,174,417	+		GFF1167	0.86	-0.0
1,174,422	+		GFF1167	0.87	+0.6
1,174,422	+		GFF1167	0.87	-0.0
1,174,433	-		GFF1167	0.87	-1.4
1,174,455	+		GFF1167	0.89	+0.3
1,174,455	+		GFF1167	0.89	-0.4
1,174,455	+		GFF1167	0.89	-1.1
1,174,455	+		GFF1167	0.89	-0.9
1,174,455	+		GFF1167	0.89	-0.1
1,174,455	+		GFF1167	0.89	+1.6
1,174,455	+		GFF1167	0.89	-0.9
1,174,455	+		GFF1167	0.89	+0.3
1,174,455	+		GFF1167	0.89	-0.5
1,174,455	+		GFF1167	0.89	-2.5
1,174,455	+		GFF1167	0.89	+0.3
1,174,455	+		GFF1167	0.89	-0.4
1,174,455	+		GFF1167	0.89	-0.7
1,174,455	+		GFF1167	0.89	+0.3
1,174,455	+		GFF1167	0.89	-2.6
1,174,455	+		GFF1167	0.89	-0.9
1,174,455	+		GFF1167	0.89	-1.5
1,174,460	+		GFF1167	0.89	-0.7
1,174,463	-		GFF1167	0.90	-0.4
1,174,463	-		GFF1167	0.90	-0.4
1,174,463	-		GFF1167	0.90	+0.6
1,174,463	-		GFF1167	0.90	-1.4
1,174,463	-		GFF1167	0.90	-0.8
1,174,463	-		GFF1167	0.90	+0.6
1,174,463	-		GFF1167	0.90	+0.5
1,174,463	-		GFF1167	0.90	+0.0
1,174,500	-				-0.8
1,174,509	+				-0.1
1,174,549	-				-0.5
1,174,578	-				+0.3
1,174,598	-				+1.0
1,174,601	+				-0.5
1,174,601	+				-0.9
1,174,601	+				-0.7
1,174,601	+				-1.5
1,174,601	+				-1.5
1,174,601	+				-0.7
1,174,609	-				+0.1
1,174,609	-				+0.4
1,174,609	-				-0.7
1,174,609	-				+0.8
1,174,663	+		GFF1168	0.17	-0.1
1,174,663	+		GFF1168	0.17	-1.4
1,174,666	-		GFF1168	0.18	-0.6
1,174,669	+		GFF1168	0.19	-1.4
1,174,694	-		GFF1168	0.28	+0.3
1,174,703	+		GFF1168	0.31	+0.3
1,174,712	+		GFF1168	0.34	-1.2
1,174,712	+		GFF1168	0.34	-0.1
1,174,720	-		GFF1168	0.36	-0.4
1,174,722	+		GFF1168	0.37	-0.3
1,174,722	+		GFF1168	0.37	+0.2
1,174,730	-		GFF1168	0.40	-1.2
1,174,730	-		GFF1168	0.40	+0.1
1,174,734	-		GFF1168	0.41	+0.2
1,174,735	-		GFF1168	0.41	-1.1
1,174,737	+		GFF1168	0.42	-0.7
1,174,741	+		GFF1168	0.43	-0.1
1,174,745	-		GFF1168	0.45	-0.5
1,174,745	-		GFF1168	0.45	+0.4
1,174,745	-		GFF1168	0.45	-1.8
1,174,765	+		GFF1168	0.51	+0.4
1,174,765	+		GFF1168	0.51	-1.0
1,174,773	-		GFF1168	0.54	-0.4
1,174,773	-		GFF1168	0.54	+0.5
1,174,780	+		GFF1168	0.56	-2.0
1,174,780	+		GFF1168	0.56	-1.0
1,174,788	-		GFF1168	0.59	+0.4
1,174,788	-		GFF1168	0.59	-1.7
1,174,798	-		GFF1168	0.62	+1.0
1,174,800	+		GFF1168	0.63	+0.6
1,174,825	-		GFF1168	0.71	-1.2
1,174,825	-		GFF1168	0.71	+0.1
1,174,825	-		GFF1168	0.71	-0.9
1,174,859	+		GFF1168	0.82	+0.5
1,174,859	+		GFF1168	0.82	-2.3
1,174,859	+		GFF1168	0.82	+1.2
1,174,859	+		GFF1168	0.82	-1.2
1,174,859	+		GFF1168	0.82	-0.6
1,174,859	+		GFF1168	0.82	-0.0
1,174,866	-		GFF1168	0.84	+0.5
1,174,867	-		GFF1168	0.85	-0.5
1,174,867	-		GFF1168	0.85	+1.6
1,174,867	-		GFF1168	0.85	-0.5
1,174,867	-		GFF1168	0.85	-0.2
1,174,867	-		GFF1168	0.85	+1.4
1,174,874	+		GFF1168	0.87	-1.2
1,174,874	+		GFF1168	0.87	+0.1
1,174,882	-				-0.4
1,174,882	-				-1.1
1,174,895	+				+0.1
1,174,895	+				-0.1
1,174,903	-				-1.8
1,174,903	-				-1.6
1,174,954	-				+0.2
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1,174,969	-				-0.2
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1,174,972	+				-1.4
1,174,973	+				-0.9
1,174,973	+				+0.0
1,174,973	+				+0.7
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1,174,975	-				-1.1
1,174,975	-				-0.3
1,174,980	-				-2.0
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1,174,980	-				-0.6
1,174,981	-				-1.1
1,174,981	-				+0.1
1,174,988	-				-0.8
1,174,998	+				-0.6
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1,175,041	-		GFF1169	0.11	-1.7
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