Strain Fitness in Sphingobium sp. HT1-2 around GFF1165

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,170,300	+		GFF1164	0.56	-1.1
1,170,317	+		GFF1164	0.58	-1.2
1,170,317	+		GFF1164	0.58	+1.1
1,170,317	+		GFF1164	0.58	-1.2
1,170,317	+		GFF1164	0.58	-0.7
1,170,317	+		GFF1164	0.58	-0.7
1,170,317	+		GFF1164	0.58	+0.2
1,170,317	+		GFF1164	0.58	+0.3
1,170,317	+		GFF1164	0.58	-0.7
1,170,317	+		GFF1164	0.58	-0.4
1,170,317	+		GFF1164	0.58	-0.2
1,170,317	+		GFF1164	0.58	-0.3
1,170,317	+		GFF1164	0.58	-1.5
1,170,317	+		GFF1164	0.58	-0.2
1,170,317	+		GFF1164	0.58	-0.1
1,170,317	+		GFF1164	0.58	+0.3
1,170,317	+		GFF1164	0.58	+0.3
1,170,317	+		GFF1164	0.58	+0.6
1,170,317	+		GFF1164	0.58	+0.6
1,170,317	+		GFF1164	0.58	-1.1
1,170,317	+		GFF1164	0.58	-0.7
1,170,317	+		GFF1164	0.58	+0.4
1,170,317	+		GFF1164	0.58	+0.1
1,170,317	+		GFF1164	0.58	-0.3
1,170,325	-		GFF1164	0.58	-0.2
1,170,325	-		GFF1164	0.58	+0.1
1,170,325	-		GFF1164	0.58	-0.7
1,170,325	-		GFF1164	0.58	+0.5
1,170,325	-		GFF1164	0.58	-0.1
1,170,325	-		GFF1164	0.58	-0.6
1,170,325	-		GFF1164	0.58	-0.8
1,170,325	-		GFF1164	0.58	-0.4
1,170,325	-		GFF1164	0.58	-1.5
1,170,325	-		GFF1164	0.58	-1.3
1,170,325	-		GFF1164	0.58	+0.3
1,170,325	-		GFF1164	0.58	+1.1
1,170,325	-		GFF1164	0.58	-0.4
1,170,334	-		GFF1164	0.59	+0.3
1,170,336	+		GFF1164	0.59	-0.7
1,170,336	+		GFF1164	0.59	-2.8
1,170,336	+		GFF1164	0.59	+0.1
1,170,336	+		GFF1164	0.59	-2.1
1,170,336	+		GFF1164	0.59	+0.5
1,170,336	+		GFF1164	0.59	+0.1
1,170,336	+		GFF1164	0.59	-0.5
1,170,336	+		GFF1164	0.59	-1.1
1,170,336	+		GFF1164	0.59	+0.1
1,170,336	+		GFF1164	0.59	-1.5
1,170,336	+		GFF1164	0.59	-0.5
1,170,336	+		GFF1164	0.59	-0.9
1,170,336	+		GFF1164	0.59	-0.0
1,170,336	+		GFF1164	0.59	-1.2
1,170,336	+		GFF1164	0.59	-1.2
1,170,336	+		GFF1164	0.59	-1.5
1,170,336	+		GFF1164	0.59	-2.7
1,170,336	+		GFF1164	0.59	-0.9
1,170,336	+		GFF1164	0.59	-1.4
1,170,336	+		GFF1164	0.59	-0.3
1,170,336	+		GFF1164	0.59	-2.4
1,170,336	+		GFF1164	0.59	-0.5
1,170,336	+		GFF1164	0.59	+0.3
1,170,344	-		GFF1164	0.59	-1.2
1,170,344	-		GFF1164	0.59	+0.1
1,170,344	-		GFF1164	0.59	-0.9
1,170,344	-		GFF1164	0.59	-0.5
1,170,344	-		GFF1164	0.59	+1.3
1,170,344	-		GFF1164	0.59	+0.4
1,170,344	-		GFF1164	0.59	-0.3
1,170,344	-		GFF1164	0.59	+0.4
1,170,344	-		GFF1164	0.59	-0.9
1,170,344	-		GFF1164	0.59	-0.6
1,170,344	-		GFF1164	0.59	-0.9
1,170,344	-		GFF1164	0.59	+0.0
1,170,344	-		GFF1164	0.59	+0.4
1,170,344	-		GFF1164	0.59	-0.1
1,170,344	-		GFF1164	0.59	-0.3
1,170,344	-		GFF1164	0.59	-1.6
1,170,344	-		GFF1164	0.59	-0.6
1,170,344	-		GFF1164	0.59	-1.2
1,170,344	-		GFF1164	0.59	-0.9
1,170,344	-		GFF1164	0.59	-1.2
1,170,344	-		GFF1164	0.59	-1.6
1,170,346	+		GFF1164	0.60	+0.1
1,170,351	+		GFF1164	0.60	-0.3
1,170,363	+		GFF1164	0.61	-0.8
1,170,373	+		GFF1164	0.61	-1.5
1,170,394	+		GFF1164	0.63	-0.1
1,170,416	+		GFF1164	0.64	+0.3
1,170,416	+		GFF1164	0.64	-0.7
1,170,416	+		GFF1164	0.64	-1.2
1,170,424	-		GFF1164	0.65	+0.2
1,170,445	-		GFF1164	0.66	-0.5
1,170,456	-		GFF1164	0.67	+0.7
1,170,472	+		GFF1164	0.68	-1.2
1,170,472	+		GFF1164	0.68	-0.1
1,170,482	+		GFF1164	0.68	+0.6
1,170,493	+		GFF1164	0.69	-0.8
1,170,516	-		GFF1164	0.71	+0.3
1,170,535	+		GFF1164	0.72	+0.8
1,170,542	+		GFF1164	0.72	-0.7
1,170,543	-		GFF1164	0.72	-0.7
1,170,555	+		GFF1164	0.73	-0.5
1,170,563	-		GFF1164	0.74	-0.2
1,170,568	+		GFF1164	0.74	+0.4
1,170,568	+		GFF1164	0.74	-0.2
1,170,568	+		GFF1164	0.74	-0.4
1,170,572	-		GFF1164	0.74	-0.6
1,170,573	+		GFF1164	0.74	+0.3
1,170,576	-		GFF1164	0.75	+0.3
1,170,581	-		GFF1164	0.75	+0.9
1,170,586	+		GFF1164	0.75	-0.7
1,170,594	-		GFF1164	0.76	-2.0
1,170,610	+		GFF1164	0.77	-0.8
1,170,610	+		GFF1164	0.77	+0.3
1,170,611	+		GFF1164	0.77	-1.4
1,170,619	-		GFF1164	0.77	+0.6
1,170,634	+		GFF1164	0.78	-1.8
1,170,637	-		GFF1164	0.79	-0.6
1,170,639	+		GFF1164	0.79	-1.0
1,170,639	+		GFF1164	0.79	-1.1
1,170,639	+		GFF1164	0.79	+0.1
1,170,639	+		GFF1164	0.79	+0.6
1,170,639	+		GFF1164	0.79	-0.5
1,170,639	+		GFF1164	0.79	+1.1
1,170,639	+		GFF1164	0.79	+0.6
1,170,639	+		GFF1164	0.79	-1.2
1,170,641	+		GFF1164	0.79	+1.0
1,170,641	+		GFF1164	0.79	+0.4
1,170,647	-		GFF1164	0.79	-0.2
1,170,647	-		GFF1164	0.79	+0.2
1,170,647	-		GFF1164	0.79	-1.7
1,170,647	-		GFF1164	0.79	-0.7
1,170,647	-		GFF1164	0.79	-0.3
1,170,647	-		GFF1164	0.79	+1.2
1,170,649	-		GFF1164	0.79	-2.1
1,170,651	+		GFF1164	0.80	-0.2
1,170,654	-		GFF1164	0.80	-1.1
1,170,658	+		GFF1164	0.80	+0.9
1,170,663	+		GFF1164	0.80	-1.2
1,170,663	+		GFF1164	0.80	-1.4
1,170,663	+		GFF1164	0.80	+2.3
1,170,663	+		GFF1164	0.80	-0.3
1,170,663	+		GFF1164	0.80	-0.8
1,170,663	+		GFF1164	0.80	+0.3
1,170,666	-		GFF1164	0.81	-1.5
1,170,671	-		GFF1164	0.81	+0.7
1,170,671	-		GFF1164	0.81	-2.4
1,170,671	-		GFF1164	0.81	-1.6
1,170,671	-		GFF1164	0.81	-0.2
1,170,672	-		GFF1164	0.81	-1.1
1,170,681	+		GFF1164	0.81	-0.5
1,170,686	+		GFF1164	0.82	+0.9
1,170,697	+		GFF1164	0.83	-0.0
1,170,702	+		GFF1164	0.83	+1.2
1,170,702	+		GFF1164	0.83	-0.3
1,170,715	-		GFF1164	0.84	-0.5
1,170,725	+		GFF1164	0.84	+0.1
1,170,728	-		GFF1164	0.85	-0.9
1,170,728	-		GFF1164	0.85	+0.8
1,170,730	+		GFF1164	0.85	-0.5
1,170,730	+		GFF1164	0.85	-1.4
1,170,733	-		GFF1164	0.85	+0.2
1,170,733	-		GFF1164	0.85	+0.3
1,170,767	+		GFF1164	0.87	-1.1
1,170,774	-		GFF1164	0.88	-1.6
1,170,774	-		GFF1164	0.88	+0.2
1,170,796	+		GFF1164	0.89	+0.4
1,170,804	-		GFF1164	0.90	-0.6
1,170,809	+		GFF1164	0.90	+0.9
1,170,816	+				+0.6
1,170,816	+				+0.8
1,170,816	+				-0.4
1,170,816	+				+1.0
1,170,816	+				+0.1
1,170,816	+				+0.1
1,170,821	+				-0.9
1,170,823	-				-0.6
1,170,823	-				+0.8
1,170,824	-				+0.5
1,170,824	-				+1.2
1,170,826	+				-0.9
1,170,832	+				-0.3
1,170,834	-				-0.4
1,170,834	-				-0.5
1,170,834	-				+0.9
1,170,834	-				-1.1
1,170,834	-				+0.2
1,170,839	+				-0.0
1,170,840	-				-0.7
1,170,840	-				-0.2
1,170,847	-				-0.4
1,170,847	-				-0.9
1,170,884	-				-0.7
1,170,886	+				-0.6
1,170,913	+				+0.2
1,170,921	-				+0.2
1,170,927	+				-2.2
1,170,937	-				+0.4
1,170,998	+				-0.7
1,171,019	+				-0.4
1,171,022	-				-0.6
1,171,076	+				-0.5
1,171,081	+				-0.2
1,171,171	+				+1.0
1,171,171	+				-0.9
1,171,177	+				+1.1
1,171,179	-				-1.4
1,171,179	-				-0.7
1,171,202	+				-1.2
1,171,202	+				-1.8
1,171,209	-				-1.4
1,171,220	-				-0.3
1,171,228	-				+0.3
1,171,228	-				+1.0
1,171,270	+				-1.2
1,171,271	+				-0.9
1,171,271	+				-1.2
1,171,271	+				+0.3
1,171,271	+				-0.3
1,171,271	+				-1.9
1,171,271	+				-0.1
1,171,271	+				+1.1
1,171,271	+				-1.6
1,171,271	+				+0.4
1,171,271	+				-0.0
1,171,271	+				-1.3
1,171,272	+				-0.2
1,171,273	+				-0.9
1,171,273	+				-0.3
1,171,279	-				-2.5
1,171,279	-				+0.1
1,171,279	-				+1.1
1,171,279	-				-0.2
1,171,279	-				-0.8
1,171,279	-				+0.6
1,171,279	-				-0.4
1,171,279	-				+1.0
1,171,279	-				+1.7
1,171,281	-				-0.5
1,171,288	+				-0.4
1,171,308	-		GFF1165	0.15	+1.2
1,171,316	+		GFF1165	0.21	+0.1
1,171,324	-		GFF1165	0.28	+1.0
1,171,326	+		GFF1165	0.29	-0.4
1,171,326	+		GFF1165	0.29	+1.3
1,171,326	+		GFF1165	0.29	+1.6
1,171,329	-		GFF1165	0.32	-0.7
1,171,349	-		GFF1165	0.48	-0.2
1,171,375	+		GFF1165	0.69	-1.5
1,171,384	-		GFF1165	0.76	+1.2
1,171,388	-		GFF1165	0.80	-0.2
1,171,445	+				-1.2
1,171,481	+				-0.6
1,171,503	+				-0.4
1,171,503	+				-0.9
1,171,506	-				-1.2
1,171,511	-				-1.4
1,171,511	-				+0.1
1,171,511	-				-0.2
1,171,511	-				-1.5
1,171,521	+				-0.2
1,171,521	+				+0.7
1,171,566	+				+1.1
1,171,574	-				-0.2
1,171,574	-				-1.5
1,171,574	-				-0.1
1,171,640	-				+0.2
1,171,646	+				-1.1
1,171,646	+				+0.2
1,171,654	-				+0.8
1,171,686	+		GFF1166	0.12	-0.3
1,171,687	+		GFF1166	0.12	-0.9
1,171,687	+		GFF1166	0.12	+0.4
1,171,687	+		GFF1166	0.12	+1.0
1,171,694	-		GFF1166	0.12	+0.4
1,171,694	-		GFF1166	0.12	-1.1
1,171,694	-		GFF1166	0.12	-1.4
1,171,721	+		GFF1166	0.14	+0.0
1,171,739	+		GFF1166	0.15	+0.2
1,171,739	+		GFF1166	0.15	-0.4
1,171,739	+		GFF1166	0.15	+0.7
1,171,739	+		GFF1166	0.15	-0.7
1,171,739	+		GFF1166	0.15	-1.1
1,171,747	-		GFF1166	0.15	-2.1
1,171,747	-		GFF1166	0.15	+0.4
1,171,747	-		GFF1166	0.15	+0.2
1,171,747	-		GFF1166	0.15	+0.0
1,171,747	-		GFF1166	0.15	+1.2
1,171,747	-		GFF1166	0.15	+0.8
1,171,747	-		GFF1166	0.15	-0.1
1,171,788	-		GFF1166	0.18	-0.0
1,171,840	+		GFF1166	0.21	-0.1
1,171,845	+		GFF1166	0.21	-0.4
1,171,845	+		GFF1166	0.21	-2.5
1,171,845	+		GFF1166	0.21	-0.3
1,171,845	+		GFF1166	0.21	-1.7
1,171,848	-		GFF1166	0.21	-0.8
1,171,853	-		GFF1166	0.21	-2.1
1,171,853	-		GFF1166	0.21	+0.4
1,171,853	-		GFF1166	0.21	-0.3
1,171,853	-		GFF1166	0.21	-0.5
1,171,853	-		GFF1166	0.21	-0.6
1,171,853	-		GFF1166	0.21	-1.5
1,171,856	+		GFF1166	0.21	-2.2
1,171,862	+		GFF1166	0.22	-3.6
1,171,879	+		GFF1166	0.23	-3.1
1,171,879	+		GFF1166	0.23	-1.4
1,171,879	+		GFF1166	0.23	-0.9
1,171,879	+		GFF1166	0.23	-1.4
1,171,879	+		GFF1166	0.23	-0.9
1,171,879	+		GFF1166	0.23	-1.4
1,171,879	+		GFF1166	0.23	+0.3
1,171,879	+		GFF1166	0.23	+0.1
1,171,879	+		GFF1166	0.23	-0.3
1,171,885	+		GFF1166	0.23	-1.7
1,171,887	-		GFF1166	0.23	+0.6
1,171,887	-		GFF1166	0.23	+0.4
1,171,887	-		GFF1166	0.23	-1.3
1,171,887	-		GFF1166	0.23	+0.9
1,171,903	+		GFF1166	0.24	+0.7
1,171,908	+		GFF1166	0.24	+1.2
1,171,911	-		GFF1166	0.25	-0.8
1,171,914	+		GFF1166	0.25	+1.1
1,171,922	-		GFF1166	0.25	-0.0
1,171,931	+		GFF1166	0.26	-0.4
1,171,931	+		GFF1166	0.26	+0.0
1,171,931	+		GFF1166	0.26	+0.7
1,171,933	+		GFF1166	0.26	-2.2
1,171,961	+		GFF1166	0.28	-1.8
1,171,967	+		GFF1166	0.28	+1.3
1,171,967	+		GFF1166	0.28	-1.0
1,171,968	+		GFF1166	0.28	+0.1
1,171,968	+		GFF1166	0.28	+1.0
1,171,968	+		GFF1166	0.28	+0.8
1,171,968	+		GFF1166	0.28	-1.7
1,171,969	-		GFF1166	0.28	-2.1
1,171,969	-		GFF1166	0.28	-0.6
1,171,969	-		GFF1166	0.28	+0.6
1,171,975	-		GFF1166	0.28	+0.3
1,171,983	-		GFF1166	0.29	+0.1
1,171,992	-		GFF1166	0.29	-0.2
1,171,997	-		GFF1166	0.30	+0.6
1,172,006	+		GFF1166	0.30	-1.1
1,172,011	+		GFF1166	0.30	-2.0
1,172,011	+		GFF1166	0.30	+0.8
1,172,016	+		GFF1166	0.31	-0.4
1,172,016	+		GFF1166	0.31	+0.8
1,172,016	+		GFF1166	0.31	-0.5
1,172,016	+		GFF1166	0.31	-0.9
1,172,016	+		GFF1166	0.31	-1.4
1,172,016	+		GFF1166	0.31	-0.4
1,172,019	-		GFF1166	0.31	-0.1
1,172,019	-		GFF1166	0.31	-1.9
1,172,019	-		GFF1166	0.31	-0.2
1,172,024	-		GFF1166	0.31	-0.5
1,172,024	-		GFF1166	0.31	+0.1
1,172,048	-		GFF1166	0.33	-0.8
1,172,048	-		GFF1166	0.33	+1.0
1,172,048	-		GFF1166	0.33	-0.9
1,172,053	-		GFF1166	0.33	-0.7
1,172,059	-		GFF1166	0.33	-0.2
1,172,061	+		GFF1166	0.33	-1.0
1,172,085	+		GFF1166	0.35	-1.2
1,172,085	+		GFF1166	0.35	+0.8
1,172,085	+		GFF1166	0.35	-0.2
1,172,085	+		GFF1166	0.35	+0.6
1,172,085	+		GFF1166	0.35	+0.1
1,172,085	+		GFF1166	0.35	+1.0
1,172,090	+		GFF1166	0.35	-0.1
1,172,093	-		GFF1166	0.35	-0.6
1,172,093	-		GFF1166	0.35	+0.9
1,172,093	-		GFF1166	0.35	-1.8
1,172,119	+		GFF1166	0.37	-0.0
1,172,155	+		GFF1166	0.39	+1.1
1,172,159	+		GFF1166	0.39	-1.4
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1,172,209	+		GFF1166	0.42	-0.8
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1,172,221	+		GFF1166	0.43	-0.4
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1,172,232	+		GFF1166	0.43	+0.2
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1,172,276	+		GFF1166	0.46	-0.3
1,172,277	-		GFF1166	0.46	-1.1
1,172,284	+		GFF1166	0.46	+0.9
1,172,292	-		GFF1166	0.47	-2.2
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1,172,311	+		GFF1166	0.48	-0.6
1,172,319	+		GFF1166	0.48	-2.5
1,172,319	+		GFF1166	0.48	-0.7
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1,172,321	+		GFF1166	0.48	+0.1
1,172,321	+		GFF1166	0.48	+1.0
1,172,321	+		GFF1166	0.48	-1.6
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1,172,347	-		GFF1166	0.50	-0.6
1,172,355	+		GFF1166	0.50	+0.4
1,172,363	+		GFF1166	0.51	-1.9
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1,172,365	-		GFF1166	0.51	-1.6
1,172,373	+		GFF1166	0.51	-0.4
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1,172,384	+		GFF1166	0.52	-0.4
1,172,392	-		GFF1166	0.52	-1.8
1,172,392	-		GFF1166	0.52	-1.3
1,172,392	-		GFF1166	0.52	-2.6