Strain Fitness in Sphingobium sp. HT1-2 around GFF1044

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,047,844	+				-0.9
1,047,846	+				+0.0
1,047,851	+				-2.6
1,047,854	-				+0.8
1,047,859	-				+1.3
1,047,861	+				+0.7
1,047,869	-				-1.3
1,047,894	-				-1.4
1,047,899	-				+0.0
1,047,934	+				+0.8
1,047,944	+				-0.6
1,047,944	+				-0.3
1,047,944	+				-1.4
1,047,949	+				+0.5
1,047,952	-				-1.1
1,047,952	-				-0.0
1,047,952	-				+1.1
1,047,952	-				+0.1
1,047,952	-				-0.9
1,047,952	-				+0.2
1,047,956	+				-2.8
1,047,956	+				-1.4
1,047,956	+				-0.1
1,047,957	-				-0.5
1,047,957	-				-0.9
1,047,957	-				-1.3
1,047,962	-				-1.5
1,047,964	-				-1.7
1,047,964	-				+0.2
1,047,964	-				-0.6
1,047,964	-				+0.6
1,047,968	+				-0.2
1,047,968	+				-1.6
1,047,968	+				-0.5
1,047,968	+				-0.5
1,047,968	+				+0.3
1,047,968	+				-0.4
1,047,968	+				+0.2
1,047,968	+				-0.6
1,047,968	+				+0.9
1,047,968	+				+0.7
1,047,968	+				-0.4
1,047,968	+				+0.4
1,047,976	-				-0.2
1,047,976	-				-0.4
1,047,976	-				-1.4
1,047,976	-				-0.0
1,047,976	-				-0.7
1,047,976	-				+0.1
1,047,976	-				+0.1
1,047,976	-				-0.7
1,047,976	-				-1.0
1,047,976	-				-0.4
1,047,976	-				-0.1
1,047,976	-				-0.6
1,048,012	-				+1.2
1,048,012	-				-0.5
1,048,020	-				-0.4
1,048,026	-				-0.1
1,048,056	+				-0.4
1,048,085	+				-1.0
1,048,085	+				+0.5
1,048,085	+				-1.5
1,048,085	+				-1.4
1,048,085	+				-0.3
1,048,085	+				+0.7
1,048,093	+				-1.2
1,048,093	-				+1.2
1,048,093	-				+1.7
1,048,093	-				-1.1
1,048,093	-				-0.3
1,048,093	-				+1.3
1,048,093	-				-1.8
1,048,095	+				-1.8
1,048,095	+				-0.5
1,048,095	+				+0.1
1,048,095	+				-0.1
1,048,095	+				+1.1
1,048,095	+				-0.9
1,048,095	+				+0.8
1,048,098	-				+0.1
1,048,103	-				-0.9
1,048,103	-				-0.4
1,048,103	-				-0.6
1,048,103	-				-2.1
1,048,111	+				-3.2
1,048,118	-				-0.5
1,048,121	+				-2.4
1,048,129	-				+0.7
1,048,129	-				+1.2
1,048,136	+				+0.2
1,048,136	+				+0.4
1,048,144	-				-0.0
1,048,144	-				+0.2
1,048,221	+		GFF1042	0.46	+0.1
1,048,325	+				+1.1
1,048,409	+				-1.8
1,048,412	-				-0.2
1,048,416	-				-1.1
1,048,429	-				+0.7
1,048,440	+				-1.4
1,048,440	+				+1.2
1,048,442	-				-0.8
1,048,442	-				-2.0
1,048,448	-				+0.8
1,048,466	+				-0.9
1,048,466	+				-0.6
1,048,473	+		GFF1043	0.10	-1.5
1,048,490	+		GFF1043	0.16	-0.4
1,048,490	+		GFF1043	0.16	+0.7
1,048,496	-		GFF1043	0.18	-0.7
1,048,496	-		GFF1043	0.18	+1.4
1,048,512	+		GFF1043	0.24	-0.1
1,048,551	-		GFF1043	0.38	-1.9
1,048,585	+		GFF1043	0.49	-2.8
1,048,585	+		GFF1043	0.49	+0.5
1,048,595	+		GFF1043	0.53	-1.7
1,048,595	+		GFF1043	0.53	-1.3
1,048,595	+		GFF1043	0.53	-0.0
1,048,595	+		GFF1043	0.53	+0.0
1,048,603	-		GFF1043	0.56	-1.3
1,048,603	-		GFF1043	0.56	+1.1
1,048,603	-		GFF1043	0.56	-0.2
1,048,603	-		GFF1043	0.56	-0.3
1,048,603	-		GFF1043	0.56	+1.8
1,048,607	+		GFF1043	0.57	-1.2
1,048,644	+		GFF1043	0.70	+0.4
1,048,645	+		GFF1043	0.70	-0.5
1,048,652	-		GFF1043	0.73	+0.7
1,048,653	-		GFF1043	0.73	+1.1
1,048,688	+		GFF1043	0.85	-1.6
1,048,739	-				-0.9
1,048,739	-				+1.0
1,048,740	+				-0.8
1,048,761	+				-0.7
1,048,769	-				-0.2
1,048,769	-				+0.1
1,048,779	-				+0.7
1,048,820	-				-2.6
1,048,830	+				-0.3
1,048,846	+				+1.9
1,048,865	+				+0.2
1,048,873	-				-1.3
1,048,886	-				-0.4
1,048,898	+				+1.4
1,048,906	-				+0.2
1,048,906	-				-0.4
1,048,911	+				-1.8
1,048,911	+				-0.6
1,048,911	+				-0.9
1,048,911	+				-1.2
1,048,911	+				-0.2
1,048,911	+				-0.3
1,048,911	+				+0.4
1,048,911	+				-1.6
1,048,914	-				-0.3
1,048,919	-				-0.6
1,048,919	-				+0.1
1,048,919	-				-1.3
1,048,919	-				-0.8
1,048,919	-				+1.1
1,048,919	-				-0.4
1,048,919	-				-0.3
1,048,919	-				+0.8
1,048,919	-				-1.9
1,048,919	-				-0.1
1,048,919	-				-1.2
1,048,919	-				+1.2
1,048,921	+				-1.5
1,048,962	+				-3.1
1,048,964	+				+0.3
1,048,964	-				-1.3
1,048,974	-		GFF1044	0.11	-1.0
1,048,980	+		GFF1044	0.11	+0.1
1,048,990	+		GFF1044	0.12	+1.4
1,048,993	+		GFF1044	0.12	-0.8
1,048,993	+		GFF1044	0.12	-0.5
1,048,995	+		GFF1044	0.12	-0.5
1,049,001	-		GFF1044	0.12	-0.5
1,049,003	+		GFF1044	0.12	-0.4
1,049,003	+		GFF1044	0.12	+0.6
1,049,003	+		GFF1044	0.12	+0.7
1,049,003	+		GFF1044	0.12	-0.1
1,049,003	+		GFF1044	0.12	-0.4
1,049,003	-		GFF1044	0.12	+0.2
1,049,011	-		GFF1044	0.13	+1.3
1,049,023	+		GFF1044	0.14	-1.4
1,049,040	+		GFF1044	0.15	+0.2
1,049,066	+		GFF1044	0.17	+0.3
1,049,066	+		GFF1044	0.17	+0.2
1,049,071	+		GFF1044	0.17	-0.6
1,049,074	-		GFF1044	0.17	-0.5
1,049,079	-		GFF1044	0.18	+0.2
1,049,079	-		GFF1044	0.18	+0.4
1,049,091	-		GFF1044	0.18	-0.8
1,049,100	+		GFF1044	0.19	-0.8
1,049,174	-		GFF1044	0.24	-0.0
1,049,179	-		GFF1044	0.24	-1.1
1,049,193	+		GFF1044	0.25	-0.7
1,049,194	+		GFF1044	0.25	-0.2
1,049,211	-		GFF1044	0.27	-1.1
1,049,213	+		GFF1044	0.27	-0.0
1,049,225	-		GFF1044	0.27	-1.0
1,049,225	-		GFF1044	0.27	-1.1
1,049,244	+		GFF1044	0.29	-0.4
1,049,245	+		GFF1044	0.29	-0.7
1,049,247	-		GFF1044	0.29	-1.0
1,049,252	+		GFF1044	0.29	-1.5
1,049,252	+		GFF1044	0.29	-0.1
1,049,252	+		GFF1044	0.29	-1.3
1,049,252	+		GFF1044	0.29	-0.5
1,049,252	+		GFF1044	0.29	-0.3
1,049,260	-		GFF1044	0.30	+0.4
1,049,260	-		GFF1044	0.30	+1.3
1,049,262	+		GFF1044	0.30	-0.7
1,049,293	+		GFF1044	0.32	+0.4
1,049,301	-		GFF1044	0.33	+0.3
1,049,305	+		GFF1044	0.33	-0.9
1,049,308	-		GFF1044	0.33	-0.4
1,049,313	-		GFF1044	0.33	-0.4
1,049,335	+		GFF1044	0.35	+0.5
1,049,341	+		GFF1044	0.35	+0.1
1,049,343	-		GFF1044	0.35	+0.1
1,049,348	-		GFF1044	0.36	-0.6
1,049,348	-		GFF1044	0.36	-1.2
1,049,349	-		GFF1044	0.36	-0.4
1,049,351	+		GFF1044	0.36	-0.5
1,049,352	+		GFF1044	0.36	-0.3
1,049,361	+		GFF1044	0.37	+0.2
1,049,370	+		GFF1044	0.37	-0.3
1,049,370	+		GFF1044	0.37	-1.2
1,049,370	+		GFF1044	0.37	+0.9
1,049,385	+		GFF1044	0.38	-0.3
1,049,385	+		GFF1044	0.38	-0.0
1,049,385	+		GFF1044	0.38	-1.4
1,049,385	+		GFF1044	0.38	-1.1
1,049,385	+		GFF1044	0.38	+0.4
1,049,385	+		GFF1044	0.38	-1.5
1,049,385	+		GFF1044	0.38	-2.4
1,049,385	+		GFF1044	0.38	+0.9
1,049,385	+		GFF1044	0.38	-0.7
1,049,385	+		GFF1044	0.38	-0.6
1,049,385	+		GFF1044	0.38	-0.4
1,049,385	-		GFF1044	0.38	-0.5
1,049,388	-		GFF1044	0.38	-0.4
1,049,393	+		GFF1044	0.39	-1.5
1,049,393	-		GFF1044	0.39	+1.1
1,049,393	-		GFF1044	0.39	+0.1
1,049,393	-		GFF1044	0.39	-1.1
1,049,393	-		GFF1044	0.39	-2.2
1,049,393	-		GFF1044	0.39	-1.5
1,049,393	-		GFF1044	0.39	-1.3
1,049,412	-		GFF1044	0.40	-1.8
1,049,412	-		GFF1044	0.40	+0.1
1,049,414	+		GFF1044	0.40	-0.6
1,049,414	+		GFF1044	0.40	-0.1
1,049,466	-		GFF1044	0.44	-2.7
1,049,491	-		GFF1044	0.45	+0.2
1,049,498	+		GFF1044	0.46	+1.0
1,049,499	+		GFF1044	0.46	+1.3
1,049,499	+		GFF1044	0.46	-1.7
1,049,506	-		GFF1044	0.46	+0.3
1,049,507	-		GFF1044	0.46	+0.5
1,049,514	+		GFF1044	0.47	-1.0
1,049,514	+		GFF1044	0.47	-0.1
1,049,514	+		GFF1044	0.47	+0.3
1,049,514	+		GFF1044	0.47	-1.7
1,049,522	-		GFF1044	0.48	-1.3
1,049,522	-		GFF1044	0.48	+0.7
1,049,522	-		GFF1044	0.48	+0.3
1,049,527	-		GFF1044	0.48	-1.0
1,049,542	+		GFF1044	0.49	-0.6
1,049,592	+		GFF1044	0.52	-0.2
1,049,592	-		GFF1044	0.52	+0.3
1,049,619	+		GFF1044	0.54	+0.8
1,049,624	+		GFF1044	0.54	+0.1
1,049,632	-		GFF1044	0.55	-1.3
1,049,645	+		GFF1044	0.56	-1.7
1,049,670	-		GFF1044	0.57	-3.5
1,049,702	-		GFF1044	0.60	+0.3
1,049,734	-		GFF1044	0.62	-0.9
1,049,734	-		GFF1044	0.62	+0.3
1,049,734	-		GFF1044	0.62	+0.3
1,049,740	+		GFF1044	0.62	-0.0
1,049,740	-		GFF1044	0.62	+0.0
1,049,741	-		GFF1044	0.62	+1.5
1,049,773	+		GFF1044	0.64	-0.3
1,049,851	+		GFF1044	0.70	+0.2
1,049,851	+		GFF1044	0.70	-1.7
1,049,851	+		GFF1044	0.70	+0.9
1,049,856	+		GFF1044	0.70	+0.3
1,049,859	-		GFF1044	0.70	+0.6
1,049,859	-		GFF1044	0.70	-0.8
1,049,859	-		GFF1044	0.70	-1.6
1,049,870	+		GFF1044	0.71	-0.9
1,049,870	+		GFF1044	0.71	-1.0
1,049,870	+		GFF1044	0.71	+1.0
1,049,873	-		GFF1044	0.71	-0.7
1,049,878	-		GFF1044	0.72	+0.3
1,049,878	-		GFF1044	0.72	-0.5
1,049,910	+		GFF1044	0.74	-1.7
1,049,922	+		GFF1044	0.74	-0.8
1,049,923	-		GFF1044	0.75	-0.9
1,049,925	-		GFF1044	0.75	+0.6
1,049,927	+		GFF1044	0.75	-0.3
1,049,983	+		GFF1044	0.79	-1.4
1,049,991	-		GFF1044	0.79	-1.6
1,049,991	-		GFF1044	0.79	-1.4
1,050,030	+		GFF1044	0.82	-1.6
1,050,030	+		GFF1044	0.82	-0.7
1,050,031	-		GFF1044	0.82	-1.3
1,050,031	-		GFF1044	0.82	+1.1
1,050,031	-		GFF1044	0.82	-0.7
1,050,073	+		GFF1044	0.85	+0.3
1,050,103	+		GFF1044	0.87	+0.4
1,050,108	+		GFF1044	0.87	-0.1
1,050,108	+		GFF1044	0.87	-1.3
1,050,108	+		GFF1044	0.87	-0.3
1,050,108	+		GFF1044	0.87	+0.6
1,050,108	+		GFF1044	0.87	-0.1
1,050,108	+		GFF1044	0.87	-0.7
1,050,108	+		GFF1044	0.87	-1.2
1,050,110	+		GFF1044	0.87	-0.1
1,050,111	-		GFF1044	0.87	-0.5
1,050,111	-		GFF1044	0.87	-1.0
1,050,111	-		GFF1044	0.87	-0.1
1,050,116	-		GFF1044	0.88	-0.1
1,050,116	-		GFF1044	0.88	+0.1
1,050,116	-		GFF1044	0.88	-0.5
1,050,116	-		GFF1044	0.88	+0.3
1,050,116	-		GFF1044	0.88	-1.0
1,050,116	-		GFF1044	0.88	+0.8
1,050,116	-		GFF1044	0.88	-2.5
1,050,116	-		GFF1044	0.88	+0.1
1,050,116	-		GFF1044	0.88	-1.3
1,050,118	-		GFF1044	0.88	-1.2
1,050,128	+		GFF1044	0.88	-0.7
1,050,128	+		GFF1044	0.88	+0.1
1,050,128	+		GFF1044	0.88	+0.2
1,050,130	-		GFF1044	0.89	-0.5
1,050,133	+		GFF1044	0.89	-1.7
1,050,136	-		GFF1044	0.89	+0.8
1,050,136	-		GFF1044	0.89	-0.7
1,050,136	-		GFF1044	0.89	+0.3
1,050,136	-		GFF1044	0.89	-0.5
1,050,136	-		GFF1044	0.89	-1.2
1,050,143	-		GFF1044	0.89	-1.8
1,050,143	-		GFF1044	0.89	-1.9
1,050,154	+				-0.2
1,050,169	-				+0.6
1,050,173	+				-0.8
1,050,173	+				-1.0
1,050,173	+				-0.1
1,050,173	+				-1.3
1,050,173	+				+0.7
1,050,179	-				-0.4
1,050,181	-				-1.9
1,050,181	-				-0.3
1,050,181	-				+1.1
1,050,181	-				-0.1
1,050,181	-				-1.9
1,050,181	-				+0.1
1,050,220	-				-0.4
1,050,226	-				-2.3
1,050,226	-				-0.0
1,050,280	-				-0.6
1,050,282	-				-0.0
1,050,288	+				+0.9
1,050,310	+				-0.2
1,050,329	+				-0.2
1,050,338	-				+0.7
1,050,338	-				-1.9
1,050,339	-				+0.8
1,050,339	-				-0.2
1,050,343	+				+0.5
1,050,351	-				+0.7
1,050,383	-				+0.5
1,050,383	-				-1.3
1,050,383	-				-0.0
1,050,388	+				-0.7
1,050,388	+				+0.3
1,050,388	+				+0.3
1,050,388	+				+0.4
1,050,388	+				+0.5
1,050,388	+				-0.1
1,050,388	+				-1.5
1,050,388	+				-1.6
1,050,388	+				-0.4
1,050,388	+				-1.0
1,050,388	+				-1.7
1,050,388	+				-2.8
1,050,396	-				-0.5
1,050,396	-				+1.4
1,050,396	-				-1.4
1,050,396	-				-0.7
1,050,396	-				-0.9
1,050,396	-				-0.3
1,050,396	-				-0.8
1,050,417	+				-0.9
1,050,417	+				+0.2
1,050,420	-				+1.0
1,050,425	-				-0.8
1,050,425	-				+0.6
1,050,425	-				-0.5
1,050,425	-				+0.4
1,050,427	+				-1.2
1,050,430	-				+0.6
1,050,455	-				-0.4
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1,050,488	-		GFF1045	0.12	+0.6
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1,051,295	+		GFF1045	0.74	+0.2