Strain Fitness in Sphingobium sp. HT1-2 around GFF5314

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
5,306,523	-				-0.4
5,306,556	-				-0.2
5,306,570	-				-0.1
5,306,585	-				+0.3
5,306,591	+				+1.1
5,306,599	-				+1.1
5,306,639	+				+0.3
5,306,699	+				+1.8
5,306,699	+				+0.5
5,306,706	+				+0.4
5,306,714	-		GFF5313	0.10	-0.0
5,306,745	+		GFF5313	0.13	-2.2
5,306,815	+		GFF5313	0.21	-1.1
5,306,824	-		GFF5313	0.22	+0.2
5,306,829	+		GFF5313	0.23	+0.6
5,306,851	+		GFF5313	0.25	+0.8
5,306,851	+		GFF5313	0.25	-0.5
5,306,851	+		GFF5313	0.25	+0.9
5,306,859	-		GFF5313	0.26	+0.2
5,306,869	+		GFF5313	0.27	+1.5
5,306,878	-		GFF5313	0.28	+0.1
5,306,895	-		GFF5313	0.30	+1.1
5,306,905	+		GFF5313	0.31	-0.4
5,306,914	-		GFF5313	0.32	+1.0
5,306,934	-		GFF5313	0.35	+0.4
5,306,937	+		GFF5313	0.35	-0.2
5,306,937	+		GFF5313	0.35	+0.9
5,306,944	+		GFF5313	0.36	-0.3
5,306,945	-		GFF5313	0.36	+0.2
5,306,945	-		GFF5313	0.36	-0.1
5,306,946	-		GFF5313	0.36	+0.9
5,306,946	-		GFF5313	0.36	+0.1
5,306,978	-		GFF5313	0.39	+0.8
5,306,978	-		GFF5313	0.39	-0.3
5,307,010	+		GFF5313	0.43	+0.1
5,307,024	-		GFF5313	0.45	-0.8
5,307,024	-		GFF5313	0.45	-0.7
5,307,024	-		GFF5313	0.45	+1.1
5,307,058	+		GFF5313	0.48	+0.6
5,307,058	+		GFF5313	0.48	-1.2
5,307,063	+		GFF5313	0.49	-0.8
5,307,094	+		GFF5313	0.52	+0.0
5,307,094	-		GFF5313	0.52	-1.3
5,307,102	-		GFF5313	0.53	-0.7
5,307,102	-		GFF5313	0.53	+0.7
5,307,102	-		GFF5313	0.53	+0.4
5,307,102	-		GFF5313	0.53	-0.2
5,307,102	-		GFF5313	0.53	+0.4
5,307,115	+		GFF5313	0.55	-1.3
5,307,133	-		GFF5313	0.57	-1.8
5,307,177	+		GFF5313	0.62	+1.5
5,307,215	+		GFF5313	0.66	-0.2
5,307,217	+		GFF5313	0.66	+0.2
5,307,223	-		GFF5313	0.67	-1.9
5,307,254	+		GFF5313	0.70	+0.2
5,307,258	-		GFF5313	0.71	-0.7
5,307,260	-		GFF5313	0.71	-2.2
5,307,286	+		GFF5313	0.74	+0.4
5,307,291	+		GFF5313	0.74	+0.7
5,307,291	+		GFF5313	0.74	+1.0
5,307,294	-		GFF5313	0.75	-0.1
5,307,296	+		GFF5313	0.75	+0.5
5,307,304	+		GFF5313	0.76	+0.3
5,307,322	-		GFF5313	0.78	-0.2
5,307,327	-		GFF5313	0.78	+0.7
5,307,354	+		GFF5313	0.81	+0.2
5,307,362	+		GFF5313	0.82	-0.9
5,307,362	+		GFF5313	0.82	-0.3
5,307,362	+		GFF5313	0.82	-0.2
5,307,362	+		GFF5313	0.82	+1.0
5,307,362	+		GFF5313	0.82	-1.2
5,307,362	+		GFF5313	0.82	-0.7
5,307,370	-		GFF5313	0.83	+0.1
5,307,370	-		GFF5313	0.83	-0.2
5,307,370	-		GFF5313	0.83	-1.6
5,307,370	-		GFF5313	0.83	+0.3
5,307,370	-		GFF5313	0.83	+0.5
5,307,370	-		GFF5313	0.83	+0.2
5,307,370	-		GFF5313	0.83	+0.9
5,307,370	-		GFF5313	0.83	-0.2
5,307,370	-		GFF5313	0.83	+0.6
5,307,370	-		GFF5313	0.83	+0.8
5,307,370	-		GFF5313	0.83	+1.2
5,307,381	+		GFF5313	0.84	-0.4
5,307,381	+		GFF5313	0.84	+0.8
5,307,389	-		GFF5313	0.85	+1.6
5,307,389	-		GFF5313	0.85	-0.2
5,307,398	+		GFF5313	0.86	-0.7
5,307,398	+		GFF5313	0.86	-1.1
5,307,406	-		GFF5313	0.87	-0.2
5,307,412	+		GFF5313	0.88	-0.2
5,307,419	+		GFF5313	0.89	-0.1
5,307,420	-		GFF5313	0.89	+0.3
5,307,426	+		GFF5313	0.89	+1.1
5,307,427	-		GFF5313	0.90	-0.0
5,307,462	-				-0.9
5,307,486	-				-0.7
5,307,639	+		GFF5314	0.21	+0.1
5,307,639	+		GFF5314	0.21	-0.1
5,307,639	+		GFF5314	0.21	+0.2
5,307,647	-		GFF5314	0.22	-0.6
5,307,669	-		GFF5314	0.26	+0.4
5,307,677	-		GFF5314	0.27	+0.3
5,307,677	-		GFF5314	0.27	+0.9
5,307,677	-		GFF5314	0.27	+0.3
5,307,677	-		GFF5314	0.27	-1.7
5,307,691	+		GFF5314	0.30	-1.7
5,307,719	+		GFF5314	0.35	-0.2
5,307,719	+		GFF5314	0.35	-0.0
5,307,734	-		GFF5314	0.37	-0.8
5,307,739	-		GFF5314	0.38	-0.5
5,307,759	+		GFF5314	0.41	-1.1
5,307,776	-		GFF5314	0.44	+0.2
5,307,781	-		GFF5314	0.45	-0.7
5,307,846	+		GFF5314	0.57	-0.8
5,307,879	-		GFF5314	0.62	+1.4
5,307,909	+		GFF5314	0.68	+0.1
5,307,909	+		GFF5314	0.68	-0.5
5,307,909	+		GFF5314	0.68	+0.5
5,307,909	+		GFF5314	0.68	-0.1
5,307,964	+		GFF5314	0.77	+0.8
5,307,964	+		GFF5314	0.77	+0.7
5,307,972	-		GFF5314	0.78	-0.1
5,307,972	-		GFF5314	0.78	-0.5
5,307,972	-		GFF5314	0.78	+0.1
5,307,987	-		GFF5314	0.81	-1.7
5,308,004	-		GFF5314	0.84	-0.4
5,308,006	-		GFF5314	0.84	-2.1
5,308,019	+		GFF5314	0.87	-0.7
5,308,051	+				-0.9
5,308,080	+				-1.7
5,308,088	-				-2.9
5,308,108	+				-1.2
5,308,108	+				+0.8
5,308,108	+				+0.5
5,308,116	-				-1.7
5,308,116	-				-0.2
5,308,116	-				-0.2
5,308,176	-				-1.7
5,308,198	-				+0.8
5,308,220	+				+0.5
5,308,220	+				-0.7
5,308,228	-				-0.2
5,308,228	-				+0.2
5,308,228	-				+0.5
5,308,230	+				-0.1
5,308,250	+				-1.4
5,308,250	+				-2.3
5,308,263	+				-0.8
5,308,275	+				-1.8
5,308,288	-				+0.3
5,308,303	+				-0.7
5,308,303	+				-0.2
5,308,303	+				-1.9
5,308,316	-				-2.1
5,308,318	+				+0.8
5,308,326	-				-0.7
5,308,326	-				+0.9
5,308,327	-				-1.7
5,308,334	-				+1.2
5,308,402	+		GFF5315	0.12	-0.2
5,308,402	+		GFF5315	0.12	+0.0
5,308,412	+		GFF5315	0.13	-1.8
5,308,412	+		GFF5315	0.13	-1.2
5,308,420	-		GFF5315	0.13	+1.4
5,308,422	+		GFF5315	0.13	+0.5
5,308,425	-		GFF5315	0.14	+0.1
5,308,435	-		GFF5315	0.14	+0.2
5,308,441	-		GFF5315	0.15	+0.5
5,308,445	-		GFF5315	0.15	-0.5
5,308,445	-		GFF5315	0.15	+0.2
5,308,501	+		GFF5315	0.19	+0.3
5,308,524	+		GFF5315	0.20	-1.7
5,308,524	+		GFF5315	0.20	-0.2
5,308,532	-		GFF5315	0.21	+0.6
5,308,539	+		GFF5315	0.21	-0.1
5,308,547	-		GFF5315	0.22	-0.2
5,308,557	+		GFF5315	0.23	+1.3
5,308,562	+		GFF5315	0.23	-1.9
5,308,605	-		GFF5315	0.26	+1.1
5,308,606	+		GFF5315	0.26	-1.7
5,308,616	+		GFF5315	0.26	-0.8
5,308,616	+		GFF5315	0.26	-0.9
5,308,624	-		GFF5315	0.27	-0.3
5,308,630	-		GFF5315	0.27	-1.7
5,308,634	-		GFF5315	0.28	-2.1
5,308,654	-		GFF5315	0.29	+0.2
5,308,661	-		GFF5315	0.29	+0.3
5,308,681	+		GFF5315	0.31	+0.1
5,308,689	-		GFF5315	0.31	+0.3
5,308,713	+		GFF5315	0.33	+0.9
5,308,713	+		GFF5315	0.33	-1.7
5,308,713	+		GFF5315	0.33	+0.4
5,308,721	-		GFF5315	0.33	-0.7
5,308,721	-		GFF5315	0.33	-0.5
5,308,721	-		GFF5315	0.33	+0.9
5,308,735	-		GFF5315	0.34	-0.7
5,308,735	-		GFF5315	0.34	-0.9
5,308,761	+		GFF5315	0.36	-0.2
5,308,761	+		GFF5315	0.36	-1.2
5,308,761	+		GFF5315	0.36	+0.4
5,308,761	+		GFF5315	0.36	-0.8
5,308,761	+		GFF5315	0.36	-1.5
5,308,769	-		GFF5315	0.37	-1.6
5,308,769	-		GFF5315	0.37	+1.3
5,308,770	+		GFF5315	0.37	+0.6
5,308,794	+		GFF5315	0.38	+0.2
5,308,830	+		GFF5315	0.41	-0.8
5,308,840	+		GFF5315	0.41	-1.3
5,308,840	+		GFF5315	0.41	+0.5
5,308,840	+		GFF5315	0.41	+0.8
5,308,840	+		GFF5315	0.41	-0.1
5,308,840	+		GFF5315	0.41	-2.1
5,308,843	-		GFF5315	0.42	-0.1
5,308,843	-		GFF5315	0.42	+1.5
5,308,850	+		GFF5315	0.42	+0.9
5,308,850	+		GFF5315	0.42	+0.1
5,308,890	-		GFF5315	0.45	-1.2
5,308,895	-		GFF5315	0.45	+0.8
5,308,905	+		GFF5315	0.46	+0.8
5,308,905	+		GFF5315	0.46	+0.9
5,308,905	+		GFF5315	0.46	+0.5
5,308,905	+		GFF5315	0.46	+1.1
5,308,913	-		GFF5315	0.46	+0.4
5,308,913	-		GFF5315	0.46	-1.1
5,308,913	-		GFF5315	0.46	+0.9
5,308,913	-		GFF5315	0.46	+0.7
5,308,913	-		GFF5315	0.46	-1.4
5,308,921	+		GFF5315	0.47	-0.6
5,308,921	+		GFF5315	0.47	-2.5
5,308,938	+		GFF5315	0.48	-0.8
5,308,957	-		GFF5315	0.49	+0.8
5,308,957	-		GFF5315	0.49	+0.5
5,308,991	+		GFF5315	0.52	-2.2
5,309,001	+		GFF5315	0.52	+0.8
5,309,001	+		GFF5315	0.52	+0.1
5,309,009	-		GFF5315	0.53	+0.8
5,309,012	+		GFF5315	0.53	+0.6
5,309,022	+		GFF5315	0.54	-1.6
5,309,022	+		GFF5315	0.54	-0.5
5,309,022	+		GFF5315	0.54	-0.3
5,309,022	+		GFF5315	0.54	+1.0
5,309,022	+		GFF5315	0.54	-0.5
5,309,029	+		GFF5315	0.54	-0.4
5,309,030	-		GFF5315	0.54	-0.8
5,309,030	-		GFF5315	0.54	-0.5
5,309,030	-		GFF5315	0.54	+0.8
5,309,030	-		GFF5315	0.54	-1.0
5,309,030	-		GFF5315	0.54	-2.1
5,309,056	+		GFF5315	0.56	-0.4
5,309,056	+		GFF5315	0.56	-1.0
5,309,071	+		GFF5315	0.57	+0.2
5,309,080	-		GFF5315	0.57	-2.1
5,309,086	+		GFF5315	0.58	+0.1
5,309,094	-		GFF5315	0.58	+1.2