Strain Fitness in Sphingobium sp. HT1-2 around GFF4861

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,845,474	+		GFF4859	0.57	+0.9
4,845,479	+		GFF4859	0.57	-0.7
4,845,482	-		GFF4859	0.58	+0.9
4,845,482	-		GFF4859	0.58	-0.1
4,845,482	-		GFF4859	0.58	+0.2
4,845,517	-		GFF4859	0.62	+1.6
4,845,529	+		GFF4859	0.64	-0.2
4,845,534	+		GFF4859	0.64	+1.0
4,845,537	-		GFF4859	0.65	-1.3
4,845,550	+		GFF4859	0.67	-0.9
4,845,555	+		GFF4859	0.67	+0.8
4,845,563	-		GFF4859	0.68	-0.4
4,845,574	-		GFF4859	0.70	+0.5
4,845,597	-		GFF4859	0.73	+0.6
4,845,611	-		GFF4859	0.74	+0.4
4,845,613	+		GFF4859	0.75	-0.0
4,845,621	-		GFF4859	0.76	+1.4
4,845,621	-		GFF4859	0.76	-2.1
4,845,621	-		GFF4859	0.76	+0.0
4,845,659	-		GFF4859	0.80	+0.6
4,845,663	+		GFF4859	0.81	-1.2
4,845,669	-		GFF4859	0.82	-0.1
4,845,669	-		GFF4859	0.82	+0.5
4,845,671	-		GFF4859	0.82	-0.0
4,845,726	+		GFF4859	0.89	-1.2
4,845,732	+		GFF4859	0.90	+0.9
4,845,740	-				+0.2
4,845,744	-				+1.0
4,845,744	-				-0.7
4,845,758	+				+0.2
4,845,776	+				+0.2
4,845,784	-				-1.2
4,845,794	+				-2.1
4,845,794	+				+1.1
4,845,797	-				+0.9
4,845,900	+		GFF4860	0.14	-0.1
4,845,904	-		GFF4860	0.16	+0.2
4,845,904	-		GFF4860	0.16	+1.0
4,845,914	-		GFF4860	0.19	+0.7
4,845,920	-		GFF4860	0.22	+0.4
4,845,980	-		GFF4860	0.44	+0.3
4,846,023	+		GFF4860	0.60	-1.6
4,846,026	-		GFF4860	0.61	-0.5
4,846,038	+		GFF4860	0.66	-0.2
4,846,038	+		GFF4860	0.66	-2.7
4,846,048	+		GFF4860	0.70	+0.7
4,846,059	-		GFF4860	0.74	-0.5
4,846,077	-		GFF4860	0.81	-1.0
4,846,078	-		GFF4860	0.81	+0.0
4,846,078	-		GFF4860	0.81	-0.5
4,846,078	-		GFF4860	0.81	+0.9
4,846,084	-		GFF4860	0.83	-0.0
4,846,142	+				-0.4
4,846,161	-				+0.1
4,846,190	+				-0.6
4,846,294	-				+0.3
4,846,327	-				+0.8
4,846,337	-				+1.1
4,846,363	-				+0.0
4,846,368	-				-0.7
4,846,434	+				-2.8
4,846,436	+				-0.6
4,846,436	+				-2.0
4,846,440	-				-0.1
4,846,442	-				-0.3
4,846,442	-				-0.1
4,846,442	-				+0.5
4,846,447	-				+0.1
4,846,450	-				-2.0
4,846,451	-				+0.5
4,846,455	-				-0.6
4,846,463	+				+0.6
4,846,476	-				-0.6
4,846,486	+				-1.7
4,846,486	-				-0.3
4,846,486	-				+0.2
4,846,504	-				-1.4
4,846,509	-				-2.1
4,846,547	+				+1.1
4,846,550	-				+1.1
4,846,555	-				-1.6
4,846,567	-				-0.6
4,846,569	+				+0.1
4,846,572	-				-0.3
4,846,577	+				-1.0
4,846,579	+				-0.2
4,846,585	-				-1.5
4,846,585	-				+0.3
4,846,587	-				+1.1
4,846,592	+				-1.5
4,846,652	+		GFF4861	0.13	+0.7
4,846,681	+		GFF4861	0.15	+0.7
4,846,689	-		GFF4861	0.15	+1.2
4,846,689	-		GFF4861	0.15	+1.4
4,846,694	+		GFF4861	0.16	-0.0
4,846,694	+		GFF4861	0.16	-0.6
4,846,702	-		GFF4861	0.16	-0.4
4,846,702	-		GFF4861	0.16	-1.6
4,846,705	+		GFF4861	0.16	+0.5
4,846,705	+		GFF4861	0.16	-0.9
4,846,705	+		GFF4861	0.16	-0.5
4,846,705	+		GFF4861	0.16	-0.1
4,846,729	+		GFF4861	0.18	+0.5
4,846,737	-		GFF4861	0.18	-0.1
4,846,737	-		GFF4861	0.18	+0.1
4,846,737	-		GFF4861	0.18	+0.8
4,846,743	-		GFF4861	0.19	+1.1
4,846,743	-		GFF4861	0.19	-0.3
4,846,745	-		GFF4861	0.19	-1.4
4,846,747	+		GFF4861	0.19	+1.1
4,846,747	+		GFF4861	0.19	+1.6
4,846,755	-		GFF4861	0.20	-2.7
4,846,755	-		GFF4861	0.20	-0.3
4,846,755	-		GFF4861	0.20	-0.4
4,846,755	-		GFF4861	0.20	+0.7
4,846,757	+		GFF4861	0.20	-1.1
4,846,775	-		GFF4861	0.21	+0.8
4,846,775	-		GFF4861	0.21	+0.0
4,846,782	+		GFF4861	0.22	-1.1
4,846,790	-		GFF4861	0.22	+1.1
4,846,795	+		GFF4861	0.22	-0.2
4,846,795	+		GFF4861	0.22	+0.4
4,846,795	+		GFF4861	0.22	-0.6
4,846,795	+		GFF4861	0.22	-0.1
4,846,795	+		GFF4861	0.22	+0.4
4,846,795	+		GFF4861	0.22	+0.0
4,846,795	+		GFF4861	0.22	+0.4
4,846,795	+		GFF4861	0.22	+0.1
4,846,795	+		GFF4861	0.22	+1.0
4,846,795	+		GFF4861	0.22	-0.2
4,846,795	+		GFF4861	0.22	+0.4
4,846,795	+		GFF4861	0.22	-1.1
4,846,795	+		GFF4861	0.22	+0.3
4,846,796	-		GFF4861	0.22	+0.4
4,846,803	-		GFF4861	0.23	+0.4
4,846,803	-		GFF4861	0.23	+1.7
4,846,803	-		GFF4861	0.23	-0.1
4,846,803	-		GFF4861	0.23	-0.3
4,846,803	-		GFF4861	0.23	-0.7
4,846,803	-		GFF4861	0.23	-2.1
4,846,803	-		GFF4861	0.23	+0.6
4,846,803	-		GFF4861	0.23	+0.1
4,846,803	-		GFF4861	0.23	+0.7
4,846,803	-		GFF4861	0.23	+1.3
4,846,805	+		GFF4861	0.23	+0.4
4,846,805	+		GFF4861	0.23	-0.3
4,846,805	+		GFF4861	0.23	+2.3
4,846,805	+		GFF4861	0.23	+0.0
4,846,805	+		GFF4861	0.23	+0.5
4,846,805	+		GFF4861	0.23	+1.1
4,846,805	+		GFF4861	0.23	-1.0
4,846,805	+		GFF4861	0.23	+0.5
4,846,805	+		GFF4861	0.23	+0.1
4,846,805	+		GFF4861	0.23	-0.4
4,846,805	+		GFF4861	0.23	-0.1
4,846,805	+		GFF4861	0.23	-0.8
4,846,805	+		GFF4861	0.23	+1.4
4,846,805	+		GFF4861	0.23	-0.2
4,846,813	-		GFF4861	0.24	+0.3
4,846,813	-		GFF4861	0.24	-0.3
4,846,813	-		GFF4861	0.24	+1.0
4,846,813	-		GFF4861	0.24	-0.7
4,846,813	-		GFF4861	0.24	+0.9
4,846,813	-		GFF4861	0.24	-1.2
4,846,813	-		GFF4861	0.24	-1.1
4,846,813	-		GFF4861	0.24	-0.2
4,846,813	-		GFF4861	0.24	+0.3
4,846,813	-		GFF4861	0.24	+0.7
4,846,813	-		GFF4861	0.24	-0.0
4,846,813	-		GFF4861	0.24	-1.6
4,846,813	-		GFF4861	0.24	-0.0
4,846,813	-		GFF4861	0.24	-0.4
4,846,813	-		GFF4861	0.24	+0.3
4,846,813	-		GFF4861	0.24	-0.1
4,846,813	-		GFF4861	0.24	+0.3
4,846,813	-		GFF4861	0.24	+0.4
4,846,813	-		GFF4861	0.24	+0.3
4,846,813	-		GFF4861	0.24	-0.0
4,846,818	+		GFF4861	0.24	-1.3
4,846,825	+		GFF4861	0.24	-0.5
4,846,833	-		GFF4861	0.25	-1.6
4,846,833	-		GFF4861	0.25	+0.0
4,846,833	-		GFF4861	0.25	+0.8
4,846,833	-		GFF4861	0.25	+1.1
4,846,835	+		GFF4861	0.25	+1.4
4,846,843	-		GFF4861	0.26	-0.1
4,846,847	-		GFF4861	0.26	+0.2
4,846,849	+		GFF4861	0.26	+0.6
4,846,849	+		GFF4861	0.26	-1.0
4,846,857	-		GFF4861	0.27	-0.2
4,846,857	-		GFF4861	0.27	-0.3
4,846,874	+		GFF4861	0.28	-0.5
4,846,896	+		GFF4861	0.29	+1.1
4,846,896	+		GFF4861	0.29	+1.2
4,846,909	-		GFF4861	0.30	-0.1
4,846,915	+		GFF4861	0.31	-0.0
4,846,915	+		GFF4861	0.31	-1.1
4,846,920	+		GFF4861	0.31	+0.5
4,846,925	+		GFF4861	0.31	+0.1
4,846,928	-		GFF4861	0.31	-0.1
4,846,930	+		GFF4861	0.32	-0.1
4,846,930	+		GFF4861	0.32	-1.5
4,846,930	+		GFF4861	0.32	-0.3
4,846,930	+		GFF4861	0.32	-0.1
4,846,937	+		GFF4861	0.32	-1.2
4,846,938	-		GFF4861	0.32	-1.7
4,846,938	-		GFF4861	0.32	+0.9
4,846,938	-		GFF4861	0.32	+0.2
4,846,938	-		GFF4861	0.32	-0.6
4,846,938	-		GFF4861	0.32	+1.0
4,846,938	-		GFF4861	0.32	+1.0
4,846,938	-		GFF4861	0.32	-1.3
4,846,938	-		GFF4861	0.32	-0.6
4,846,947	+		GFF4861	0.33	+0.2
4,846,947	+		GFF4861	0.33	+0.2
4,846,955	-		GFF4861	0.33	-2.3
4,846,972	+		GFF4861	0.34	+1.2
4,846,975	+		GFF4861	0.35	+0.6
4,846,989	+		GFF4861	0.36	+0.9
4,847,001	-		GFF4861	0.36	+0.9
4,847,001	-		GFF4861	0.36	+1.1
4,847,021	+		GFF4861	0.38	-1.1
4,847,046	-		GFF4861	0.39	-0.5
4,847,055	+		GFF4861	0.40	+0.5
4,847,085	+		GFF4861	0.42	-1.2
4,847,091	+		GFF4861	0.42	-1.6
4,847,093	-		GFF4861	0.43	+1.7
4,847,093	-		GFF4861	0.43	-0.8
4,847,093	-		GFF4861	0.43	+0.9
4,847,093	-		GFF4861	0.43	-0.6
4,847,093	-		GFF4861	0.43	-0.7
4,847,100	-		GFF4861	0.43	-0.1
4,847,100	-		GFF4861	0.43	+1.9
4,847,104	+		GFF4861	0.43	-0.4
4,847,112	-		GFF4861	0.44	+0.0
4,847,120	+		GFF4861	0.44	-0.7
4,847,120	+		GFF4861	0.44	+0.6
4,847,125	+		GFF4861	0.45	+0.3
4,847,128	-		GFF4861	0.45	+0.9
4,847,129	+		GFF4861	0.45	-0.7
4,847,143	-		GFF4861	0.46	-0.2
4,847,167	+		GFF4861	0.48	-1.0
4,847,167	+		GFF4861	0.48	+0.6
4,847,167	+		GFF4861	0.48	+0.4
4,847,167	+		GFF4861	0.48	+0.3
4,847,167	+		GFF4861	0.48	-0.1
4,847,179	-		GFF4861	0.48	-1.0
4,847,184	-		GFF4861	0.49	-0.4
4,847,194	-		GFF4861	0.49	+0.9
4,847,207	+		GFF4861	0.50	-0.4
4,847,213	-		GFF4861	0.51	-0.2
4,847,222	+		GFF4861	0.51	+0.9
4,847,230	+		GFF4861	0.52	-3.2
4,847,230	-		GFF4861	0.52	+2.0
4,847,230	-		GFF4861	0.52	-0.7
4,847,235	+		GFF4861	0.52	+0.4
4,847,238	-		GFF4861	0.52	-0.7
4,847,240	+		GFF4861	0.53	+1.2
4,847,242	+		GFF4861	0.53	-0.3
4,847,243	-		GFF4861	0.53	+1.6
4,847,261	+		GFF4861	0.54	+0.1
4,847,263	-		GFF4861	0.54	-0.1
4,847,267	+		GFF4861	0.54	-0.5
4,847,271	-		GFF4861	0.55	-2.1
4,847,275	+		GFF4861	0.55	-1.4
4,847,275	-		GFF4861	0.55	-0.5
4,847,322	+		GFF4861	0.58	+0.4
4,847,324	-		GFF4861	0.58	+0.7
4,847,330	-		GFF4861	0.59	-0.3
4,847,331	+		GFF4861	0.59	+0.3
4,847,332	+		GFF4861	0.59	+1.1
4,847,332	+		GFF4861	0.59	+0.7
4,847,332	+		GFF4861	0.59	+0.3
4,847,332	+		GFF4861	0.59	+0.3
4,847,332	+		GFF4861	0.59	+0.8
4,847,332	+		GFF4861	0.59	-0.7
4,847,332	+		GFF4861	0.59	+0.2
4,847,332	+		GFF4861	0.59	+1.1
4,847,332	-		GFF4861	0.59	+0.8
4,847,340	+		GFF4861	0.59	-0.3
4,847,340	-		GFF4861	0.59	-0.9
4,847,340	-		GFF4861	0.59	-1.0
4,847,340	-		GFF4861	0.59	-0.0
4,847,345	-		GFF4861	0.60	-1.0
4,847,353	+		GFF4861	0.60	+0.7
4,847,353	-		GFF4861	0.60	-0.8
4,847,355	-		GFF4861	0.60	+0.9
4,847,355	-		GFF4861	0.60	-0.4
4,847,361	-		GFF4861	0.61	+0.6
4,847,368	+		GFF4861	0.61	+0.3
4,847,408	-		GFF4861	0.64	-0.7
4,847,423	-		GFF4861	0.65	-0.0
4,847,458	+		GFF4861	0.67	-0.6
4,847,466	-		GFF4861	0.68	+0.9
4,847,468	+		GFF4861	0.68	-0.7
4,847,477	+		GFF4861	0.69	-0.2
4,847,479	+		GFF4861	0.69	+0.9
4,847,481	-		GFF4861	0.69	+0.3
4,847,485	+		GFF4861	0.69	+0.1
4,847,485	-		GFF4861	0.69	-0.6
4,847,487	+		GFF4861	0.69	-1.0
4,847,495	-		GFF4861	0.70	-0.1
4,847,517	+		GFF4861	0.71	-0.6
4,847,517	+		GFF4861	0.71	-0.5
4,847,519	+		GFF4861	0.71	+0.9
4,847,525	-		GFF4861	0.72	-0.1
4,847,563	+		GFF4861	0.74	-0.1
4,847,568	+		GFF4861	0.75	-0.5
4,847,573	+		GFF4861	0.75	-0.4
4,847,573	+		GFF4861	0.75	+1.6
4,847,573	+		GFF4861	0.75	-0.4
4,847,573	+		GFF4861	0.75	+1.1
4,847,575	+		GFF4861	0.75	+1.3
4,847,581	-		GFF4861	0.76	+0.1
4,847,581	-		GFF4861	0.76	-0.6
4,847,581	-		GFF4861	0.76	+0.5
4,847,581	-		GFF4861	0.76	-1.1
4,847,581	-		GFF4861	0.76	+0.4
4,847,583	-		GFF4861	0.76	+0.0
4,847,598	-		GFF4861	0.77	+1.0
4,847,620	+		GFF4861	0.78	+1.1
4,847,620	+		GFF4861	0.78	-1.5
4,847,645	+		GFF4861	0.80	+0.4
4,847,645	+		GFF4861	0.80	+0.7
4,847,650	+		GFF4861	0.80	+1.1
4,847,650	+		GFF4861	0.80	+0.1
4,847,650	+		GFF4861	0.80	-0.1
4,847,650	+		GFF4861	0.80	+0.5
4,847,650	+		GFF4861	0.80	-0.3
4,847,650	+		GFF4861	0.80	-0.4
4,847,650	+		GFF4861	0.80	+0.3
4,847,653	-		GFF4861	0.81	+0.7
4,847,653	-		GFF4861	0.81	-0.3
4,847,655	+		GFF4861	0.81	-0.0
4,847,658	-		GFF4861	0.81	-1.3
4,847,658	-		GFF4861	0.81	-0.7
4,847,658	-		GFF4861	0.81	+0.2
4,847,687	+		GFF4861	0.83	+0.2
4,847,687	+		GFF4861	0.83	+0.5
4,847,687	+		GFF4861	0.83	-0.1
4,847,687	+		GFF4861	0.83	-0.1
4,847,687	+		GFF4861	0.83	-0.1
4,847,687	+		GFF4861	0.83	+0.3
4,847,687	+		GFF4861	0.83	-0.6
4,847,687	+		GFF4861	0.83	+0.5
4,847,687	+		GFF4861	0.83	-0.5
4,847,687	+		GFF4861	0.83	+0.2
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