Strain Fitness in Sphingobium sp. HT1-2 around GFF4731

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,728,921	-		GFF4730	0.45	-1.8
4,728,924	+		GFF4730	0.45	-0.6
4,728,937	-		GFF4730	0.46	+0.1
4,728,942	-		GFF4730	0.46	-2.3
4,728,952	-		GFF4730	0.47	-0.6
4,728,999	-		GFF4730	0.50	-0.3
4,729,001	+		GFF4730	0.51	+0.4
4,729,010	+		GFF4730	0.51	+0.4
4,729,013	-		GFF4730	0.51	-0.9
4,729,018	-		GFF4730	0.52	+0.4
4,729,018	-		GFF4730	0.52	+0.6
4,729,038	+		GFF4730	0.53	-0.6
4,729,048	+		GFF4730	0.54	-1.7
4,729,056	-		GFF4730	0.54	+0.5
4,729,057	+		GFF4730	0.55	-1.4
4,729,072	+		GFF4730	0.56	-0.3
4,729,080	-		GFF4730	0.56	-2.5
4,729,082	+		GFF4730	0.56	+0.1
4,729,089	+		GFF4730	0.57	-0.5
4,729,097	-		GFF4730	0.57	+0.1
4,729,118	+		GFF4730	0.59	+0.5
4,729,131	-		GFF4730	0.60	-0.0
4,729,133	+		GFF4730	0.60	+0.1
4,729,137	+		GFF4730	0.60	+1.1
4,729,139	+		GFF4730	0.60	+1.0
4,729,139	+		GFF4730	0.60	-1.1
4,729,141	-		GFF4730	0.60	+1.2
4,729,147	-		GFF4730	0.61	-0.4
4,729,155	-		GFF4730	0.61	+0.2
4,729,178	-		GFF4730	0.63	-0.2
4,729,232	+		GFF4730	0.67	-0.2
4,729,232	-		GFF4730	0.67	-1.8
4,729,232	-		GFF4730	0.67	-1.4
4,729,247	+		GFF4730	0.68	+0.8
4,729,247	+		GFF4730	0.68	+0.6
4,729,249	+		GFF4730	0.68	-0.4
4,729,249	+		GFF4730	0.68	+0.1
4,729,249	+		GFF4730	0.68	-1.8
4,729,249	+		GFF4730	0.68	+1.1
4,729,249	+		GFF4730	0.68	+0.6
4,729,249	+		GFF4730	0.68	+0.4
4,729,249	+		GFF4730	0.68	+0.9
4,729,249	+		GFF4730	0.68	+0.8
4,729,249	+		GFF4730	0.68	+0.5
4,729,249	+		GFF4730	0.68	-0.7
4,729,254	+		GFF4730	0.68	+0.6
4,729,255	-		GFF4730	0.68	-0.4
4,729,255	-		GFF4730	0.68	-0.5
4,729,255	-		GFF4730	0.68	+0.2
4,729,255	-		GFF4730	0.68	-0.3
4,729,257	-		GFF4730	0.68	+0.6
4,729,257	-		GFF4730	0.68	-0.1
4,729,257	-		GFF4730	0.68	+0.1
4,729,257	-		GFF4730	0.68	-0.0
4,729,257	-		GFF4730	0.68	-0.2
4,729,257	-		GFF4730	0.68	-2.2
4,729,257	-		GFF4730	0.68	-0.7
4,729,262	-		GFF4730	0.69	-0.4
4,729,262	-		GFF4730	0.69	+0.6
4,729,262	-		GFF4730	0.69	-0.1
4,729,262	-		GFF4730	0.69	-1.1
4,729,272	-		GFF4730	0.70	+0.0
4,729,280	-		GFF4730	0.70	+0.9
4,729,282	+		GFF4730	0.70	-0.4
4,729,285	-		GFF4730	0.70	-2.6
4,729,287	-		GFF4730	0.71	-0.8
4,729,290	-		GFF4730	0.71	+0.4
4,729,290	-		GFF4730	0.71	-0.4
4,729,293	+		GFF4730	0.71	-0.8
4,729,293	+		GFF4730	0.71	-0.3
4,729,295	-		GFF4730	0.71	+0.2
4,729,301	-		GFF4730	0.72	+0.8
4,729,301	-		GFF4730	0.72	-0.3
4,729,319	+		GFF4730	0.73	-0.2
4,729,321	-		GFF4730	0.73	-1.4
4,729,338	+		GFF4730	0.74	-0.8
4,729,338	+		GFF4730	0.74	-1.5
4,729,339	-		GFF4730	0.74	+0.2
4,729,346	-		GFF4730	0.75	+1.2
4,729,346	-		GFF4730	0.75	+0.1
4,729,346	-		GFF4730	0.75	+0.4
4,729,366	+		GFF4730	0.76	-0.9
4,729,374	-		GFF4730	0.77	+0.1
4,729,402	+		GFF4730	0.79	+1.2
4,729,402	+		GFF4730	0.79	+0.1
4,729,402	+		GFF4730	0.79	+0.5
4,729,402	+		GFF4730	0.79	-0.4
4,729,407	+		GFF4730	0.79	+1.0
4,729,410	-		GFF4730	0.79	-1.0
4,729,410	-		GFF4730	0.79	+0.3
4,729,410	-		GFF4730	0.79	-0.1
4,729,410	-		GFF4730	0.79	+0.9
4,729,501	-		GFF4730	0.86	+0.1
4,729,501	-		GFF4730	0.86	+0.0
4,729,504	+		GFF4730	0.86	+0.3
4,729,530	-		GFF4730	0.88	-0.9
4,729,539	-		GFF4730	0.88	-0.8
4,729,546	+		GFF4730	0.89	+0.2
4,729,567	-				-0.5
4,729,578	-				+0.6
4,729,585	+				-1.4
4,729,593	-				+0.2
4,729,593	-				+0.3
4,729,596	+				-1.1
4,729,596	+				-0.7
4,729,596	+				+0.1
4,729,603	-				-0.9
4,729,604	-				-0.3
4,729,604	-				-0.8
4,729,604	-				-0.7
4,729,604	-				-2.3
4,729,604	-				-2.2
4,729,623	+				-0.0
4,729,640	+				-0.5
4,729,640	+				-0.6
4,729,640	+				-0.4
4,729,648	-				+0.1
4,729,672	+				-0.1
4,729,740	+				-0.7
4,729,740	+				-1.4
4,729,740	+				-1.0
4,729,740	+				+0.3
4,729,740	+				+0.2
4,729,748	-				-0.3
4,729,748	-				-0.2
4,729,748	-				-0.9
4,729,748	-				-0.6
4,729,748	-				+0.2
4,729,766	+				+0.4
4,729,800	+				+0.1
4,729,808	-				-2.9
4,729,817	+				-0.8
4,729,817	+				-0.8
4,729,825	-				-1.6
4,729,825	-				-0.0
4,729,825	-				+0.0
4,729,827	+				-0.4
4,729,827	+				-0.8
4,729,835	-				-0.2
4,729,849	+				-0.4
4,729,861	+				-1.2
4,729,863	+				+1.1
4,729,878	+				-0.0
4,729,887	+				-1.2
4,729,897	+				-0.8
4,729,897	+				-0.0
4,729,905	-				+1.7
4,729,905	-				-0.1
4,729,905	-				-0.8
4,729,905	-				-1.1
4,729,934	+				+0.6
4,729,942	-				-1.6
4,729,942	-				+0.9
4,730,009	-				-1.3
4,730,039	-		GFF4731	0.10	+1.3
4,730,055	-		GFF4731	0.11	-0.4
4,730,077	+		GFF4731	0.13	-0.8
4,730,077	+		GFF4731	0.13	+0.2
4,730,077	+		GFF4731	0.13	+0.8
4,730,082	+		GFF4731	0.13	+0.2
4,730,082	+		GFF4731	0.13	-0.5
4,730,082	+		GFF4731	0.13	-0.3
4,730,082	+		GFF4731	0.13	+1.6
4,730,085	-		GFF4731	0.13	-0.0
4,730,087	+		GFF4731	0.13	-1.1
4,730,090	-		GFF4731	0.13	-1.1
4,730,090	-		GFF4731	0.13	-1.5
4,730,090	-		GFF4731	0.13	-0.3
4,730,090	-		GFF4731	0.13	+0.1
4,730,092	+		GFF4731	0.13	-0.5
4,730,101	-		GFF4731	0.14	-0.8
4,730,157	-		GFF4731	0.17	-1.2
4,730,187	+		GFF4731	0.19	-0.4
4,730,195	+		GFF4731	0.19	+0.1
4,730,195	+		GFF4731	0.19	-0.4
4,730,195	+		GFF4731	0.19	-2.2
4,730,220	+		GFF4731	0.21	-0.8
4,730,220	+		GFF4731	0.21	-1.1
4,730,238	-		GFF4731	0.22	-0.2
4,730,241	+		GFF4731	0.22	-0.8
4,730,254	+		GFF4731	0.23	+0.2
4,730,254	+		GFF4731	0.23	-0.8
4,730,259	+		GFF4731	0.23	-0.1
4,730,262	-		GFF4731	0.23	-0.2
4,730,262	-		GFF4731	0.23	-0.9
4,730,262	-		GFF4731	0.23	-0.6
4,730,262	-		GFF4731	0.23	+0.1
4,730,262	-		GFF4731	0.23	+1.0
4,730,262	-		GFF4731	0.23	-0.7
4,730,267	-		GFF4731	0.24	+0.9
4,730,308	-		GFF4731	0.26	+0.2
4,730,323	-		GFF4731	0.27	-3.0
4,730,324	-		GFF4731	0.27	+0.1
4,730,334	+		GFF4731	0.27	-0.1
4,730,334	+		GFF4731	0.27	-1.2
4,730,334	+		GFF4731	0.27	+0.3
4,730,334	+		GFF4731	0.27	-1.8
4,730,334	+		GFF4731	0.27	-0.3
4,730,334	+		GFF4731	0.27	+0.7
4,730,334	+		GFF4731	0.27	+0.3
4,730,334	+		GFF4731	0.27	-0.8
4,730,334	+		GFF4731	0.27	-0.1
4,730,339	+		GFF4731	0.28	-0.1
4,730,342	-		GFF4731	0.28	+0.3
4,730,342	-		GFF4731	0.28	-1.1
4,730,342	-		GFF4731	0.28	+1.5
4,730,342	-		GFF4731	0.28	-0.2
4,730,342	-		GFF4731	0.28	+0.4
4,730,347	-		GFF4731	0.28	-0.0
4,730,347	-		GFF4731	0.28	+0.5
4,730,349	+		GFF4731	0.28	+0.7
4,730,357	-		GFF4731	0.29	+1.2
4,730,376	-		GFF4731	0.30	-0.2
4,730,421	+		GFF4731	0.33	+0.2
4,730,442	+		GFF4731	0.34	+0.7
4,730,450	-		GFF4731	0.34	+0.1
4,730,465	-		GFF4731	0.35	-0.4
4,730,513	+		GFF4731	0.38	-0.4
4,730,513	+		GFF4731	0.38	-1.8
4,730,521	-		GFF4731	0.38	-0.2
4,730,521	-		GFF4731	0.38	-0.4
4,730,552	+		GFF4731	0.40	-2.2
4,730,555	-		GFF4731	0.40	-0.4
4,730,555	-		GFF4731	0.40	+0.1
4,730,560	-		GFF4731	0.41	-0.5
4,730,572	+		GFF4731	0.41	-0.9
4,730,580	-		GFF4731	0.42	-0.9
4,730,581	+		GFF4731	0.42	-0.4
4,730,582	+		GFF4731	0.42	+0.3
4,730,590	-		GFF4731	0.42	-1.1
4,730,620	-		GFF4731	0.44	-0.4
4,730,630	+		GFF4731	0.45	+0.8
4,730,630	+		GFF4731	0.45	-0.3
4,730,642	-		GFF4731	0.45	+0.4
4,730,643	-		GFF4731	0.45	+0.2
4,730,655	+		GFF4731	0.46	-0.0
4,730,663	-		GFF4731	0.47	-0.2
4,730,663	-		GFF4731	0.47	+0.5
4,730,663	-		GFF4731	0.47	+1.8
4,730,663	-		GFF4731	0.47	-0.4
4,730,663	-		GFF4731	0.47	-0.1
4,730,703	-		GFF4731	0.49	-0.8
4,730,755	+		GFF4731	0.52	+0.8
4,730,763	-		GFF4731	0.52	-0.7
4,730,798	+		GFF4731	0.54	-2.1
4,730,800	-		GFF4731	0.55	-0.3
4,730,814	+		GFF4731	0.55	-0.6
4,730,819	+		GFF4731	0.56	+0.3
4,730,823	-		GFF4731	0.56	-0.6
4,730,841	+		GFF4731	0.57	-0.3
4,730,841	+		GFF4731	0.57	+0.1
4,730,847	+		GFF4731	0.57	+0.2
4,730,849	-		GFF4731	0.57	-0.3
4,730,851	+		GFF4731	0.57	-1.0
4,730,851	+		GFF4731	0.57	-1.1
4,730,853	+		GFF4731	0.58	-0.1
4,730,853	+		GFF4731	0.58	+0.7
4,730,853	+		GFF4731	0.58	+0.5
4,730,853	+		GFF4731	0.58	+0.0
4,730,853	+		GFF4731	0.58	+0.6
4,730,861	-		GFF4731	0.58	+0.5
4,730,861	-		GFF4731	0.58	+0.9
4,730,861	-		GFF4731	0.58	+0.2
4,730,863	+		GFF4731	0.58	+0.5
4,730,863	+		GFF4731	0.58	+0.6
4,730,871	+		GFF4731	0.59	-0.4
4,730,871	+		GFF4731	0.59	-0.1
4,730,871	-		GFF4731	0.59	-0.5
4,730,885	-		GFF4731	0.59	-0.1
4,730,898	+		GFF4731	0.60	-0.1
4,730,898	+		GFF4731	0.60	-0.8
4,730,898	+		GFF4731	0.60	+0.8
4,730,898	+		GFF4731	0.60	-1.1
4,730,898	+		GFF4731	0.60	-0.1
4,730,906	-		GFF4731	0.61	-2.4
4,730,906	-		GFF4731	0.61	+0.6
4,730,906	-		GFF4731	0.61	+0.9
4,730,943	+		GFF4731	0.63	-1.5
4,730,952	-		GFF4731	0.63	+0.2
4,730,989	+		GFF4731	0.66	+0.1
4,730,994	+		GFF4731	0.66	-0.1
4,730,997	-		GFF4731	0.66	-0.5
4,731,013	+		GFF4731	0.67	-0.0
4,731,029	-		GFF4731	0.68	+0.5
4,731,059	+		GFF4731	0.70	-0.6
4,731,059	+		GFF4731	0.70	+0.0
4,731,067	-		GFF4731	0.70	+0.1
4,731,067	-		GFF4731	0.70	-0.2
4,731,096	+		GFF4731	0.72	-1.1
4,731,098	+		GFF4731	0.72	+0.2
4,731,098	+		GFF4731	0.72	-1.3
4,731,103	+		GFF4731	0.72	-1.0
4,731,103	+		GFF4731	0.72	-1.2
4,731,103	+		GFF4731	0.72	-0.2
4,731,103	+		GFF4731	0.72	+0.5
4,731,103	+		GFF4731	0.72	+0.2
4,731,103	+		GFF4731	0.72	-0.3
4,731,103	+		GFF4731	0.72	-0.9
4,731,108	+		GFF4731	0.72	-1.2
4,731,108	+		GFF4731	0.72	+0.7
4,731,111	-		GFF4731	0.73	-0.5
4,731,111	-		GFF4731	0.73	-1.2
4,731,111	-		GFF4731	0.73	-0.1
4,731,111	-		GFF4731	0.73	-0.7
4,731,111	-		GFF4731	0.73	+0.4
4,731,111	-		GFF4731	0.73	+1.0
4,731,111	-		GFF4731	0.73	-0.4
4,731,111	-		GFF4731	0.73	+1.2
4,731,111	-		GFF4731	0.73	-0.2
4,731,111	-		GFF4731	0.73	+0.0
4,731,111	-		GFF4731	0.73	-0.4
4,731,116	-		GFF4731	0.73	-1.6
4,731,116	-		GFF4731	0.73	+0.2
4,731,121	-		GFF4731	0.73	-0.1
4,731,125	-		GFF4731	0.73	+0.1
4,731,133	+		GFF4731	0.74	+0.3
4,731,167	+		GFF4731	0.76	+0.4
4,731,177	+		GFF4731	0.76	-2.0
4,731,178	+		GFF4731	0.76	+0.2
4,731,178	+		GFF4731	0.76	-1.1
4,731,178	+		GFF4731	0.76	+0.6
4,731,178	+		GFF4731	0.76	-0.2
4,731,183	+		GFF4731	0.77	+0.6
4,731,183	+		GFF4731	0.77	+1.2
4,731,185	+		GFF4731	0.77	-0.1
4,731,185	+		GFF4731	0.77	-0.4
4,731,186	-		GFF4731	0.77	-0.7
4,731,186	-		GFF4731	0.77	-0.3
4,731,186	-		GFF4731	0.77	+0.8
4,731,193	-		GFF4731	0.77	-1.8
4,731,207	-		GFF4731	0.78	-2.2
4,731,207	-		GFF4731	0.78	-0.0
4,731,207	-		GFF4731	0.78	-0.5
4,731,219	-		GFF4731	0.79	+0.4
4,731,229	-		GFF4731	0.79	+1.7
4,731,229	-		GFF4731	0.79	-0.1
4,731,230	+		GFF4731	0.80	+0.1
4,731,238	+		GFF4731	0.80	-0.5
4,731,238	+		GFF4731	0.80	-0.9
4,731,238	+		GFF4731	0.80	-2.4
4,731,238	+		GFF4731	0.80	+0.5
4,731,246	+		GFF4731	0.80	-1.6
4,731,246	-		GFF4731	0.80	-0.4
4,731,251	-		GFF4731	0.81	+0.3
4,731,251	-		GFF4731	0.81	-0.8
4,731,254	+		GFF4731	0.81	-1.1
4,731,262	-		GFF4731	0.81	+0.5
4,731,264	+		GFF4731	0.81	-0.8
4,731,264	+		GFF4731	0.81	-0.0
4,731,348	+		GFF4731	0.86	+0.6
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