Strain Fitness in Sphingobium sp. HT1-2 around GFF4690

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,691,140	+		GFF4689	0.38	-0.1
4,691,168	+		GFF4689	0.40	+1.7
4,691,189	-		GFF4689	0.42	-0.9
4,691,206	+		GFF4689	0.44	+1.1
4,691,206	+		GFF4689	0.44	+0.5
4,691,207	+		GFF4689	0.44	-0.4
4,691,207	+		GFF4689	0.44	+0.1
4,691,207	+		GFF4689	0.44	+1.4
4,691,212	+		GFF4689	0.44	-0.9
4,691,213	-		GFF4689	0.44	+0.4
4,691,215	-		GFF4689	0.44	+0.5
4,691,215	-		GFF4689	0.44	+0.4
4,691,215	-		GFF4689	0.44	+1.2
4,691,215	-		GFF4689	0.44	-0.2
4,691,217	+		GFF4689	0.44	+0.8
4,691,234	+		GFF4689	0.46	-0.6
4,691,251	+		GFF4689	0.47	+1.5
4,691,251	+		GFF4689	0.47	+0.5
4,691,251	+		GFF4689	0.47	-0.9
4,691,259	-		GFF4689	0.48	+0.2
4,691,272	-		GFF4689	0.49	-1.5
4,691,322	-		GFF4689	0.53	-0.1
4,691,322	-		GFF4689	0.53	-0.2
4,691,322	-		GFF4689	0.53	+0.2
4,691,344	-		GFF4689	0.55	+0.5
4,691,344	-		GFF4689	0.55	-0.2
4,691,346	-		GFF4689	0.55	+0.2
4,691,375	+		GFF4689	0.57	+0.7
4,691,383	-		GFF4689	0.58	-0.1
4,691,383	-		GFF4689	0.58	-0.1
4,691,393	+		GFF4689	0.59	-0.3
4,691,488	+		GFF4689	0.66	-0.1
4,691,488	+		GFF4689	0.66	+0.3
4,691,496	-		GFF4689	0.67	+0.8
4,691,496	-		GFF4689	0.67	+1.0
4,691,496	-		GFF4689	0.67	+0.9
4,691,496	-		GFF4689	0.67	-0.6
4,691,502	+		GFF4689	0.67	+1.1
4,691,535	+		GFF4689	0.70	-0.1
4,691,535	+		GFF4689	0.70	+0.6
4,691,543	-		GFF4689	0.71	-0.1
4,691,562	-		GFF4689	0.72	-0.5
4,691,564	+		GFF4689	0.72	+0.8
4,691,569	+		GFF4689	0.73	+0.1
4,691,572	-		GFF4689	0.73	+0.9
4,691,581	+		GFF4689	0.74	-0.2
4,691,589	-		GFF4689	0.74	-1.0
4,691,589	-		GFF4689	0.74	+0.5
4,691,591	+		GFF4689	0.75	+0.8
4,691,594	-		GFF4689	0.75	+0.7
4,691,599	+		GFF4689	0.75	-0.4
4,691,599	-		GFF4689	0.75	+0.1
4,691,599	-		GFF4689	0.75	+0.6
4,691,607	-		GFF4689	0.76	-0.3
4,691,607	-		GFF4689	0.76	-1.5
4,691,618	+		GFF4689	0.77	-0.9
4,691,633	-		GFF4689	0.78	-0.2
4,691,635	+		GFF4689	0.78	-0.2
4,691,642	+		GFF4689	0.79	+0.7
4,691,647	+		GFF4689	0.79	-0.6
4,691,649	+		GFF4689	0.79	-1.7
4,691,663	-		GFF4689	0.80	+0.6
4,691,676	+		GFF4689	0.81	-0.3
4,691,729	+		GFF4689	0.86	+0.2
4,691,762	-		GFF4689	0.88	+0.2
4,691,776	+		GFF4689	0.89	-0.5
4,691,776	+		GFF4689	0.89	+0.8
4,691,776	+		GFF4689	0.89	+1.0
4,691,776	+		GFF4689	0.89	+0.1
4,691,776	+		GFF4689	0.89	-2.7
4,691,776	+		GFF4689	0.89	+0.5
4,691,776	+		GFF4689	0.89	-0.3
4,691,776	+		GFF4689	0.89	+0.4
4,691,776	-		GFF4689	0.89	+0.6
4,691,779	-		GFF4689	0.90	-0.4
4,691,784	-				-0.0
4,691,784	-				+0.3
4,691,784	-				+0.1
4,691,784	-				-2.1
4,691,819	+				-0.7
4,691,832	+				+0.2
4,691,832	+				-0.9
4,691,832	+				+0.5
4,691,837	+				+0.6
4,691,879	+				+0.0
4,691,886	-				-0.7
4,691,930	-				-0.7
4,691,941	-				-0.5
4,691,943	+				+0.4
4,691,943	+				-2.2
4,691,943	+				-0.6
4,691,967	+				+0.1
4,691,973	+				-0.3
4,691,975	-				+0.1
4,691,975	-				+0.7
4,691,975	-				+0.8
4,691,981	-				-0.3
4,691,981	-				+0.5
4,691,985	+				+1.1
4,691,991	-				-2.5
4,691,991	-				-0.9
4,692,021	+				+0.7
4,692,021	+				+0.7
4,692,021	+				-0.1
4,692,021	+				-1.0
4,692,024	-				-1.4
4,692,024	-				+0.3
4,692,029	-				-0.5
4,692,029	-				+0.7
4,692,029	-				+1.9
4,692,029	-				+1.0
4,692,067	-				+0.3
4,692,067	-				+0.1
4,692,075	+				-0.3
4,692,075	+				+1.2
4,692,080	+				-0.0
4,692,080	+				+0.2
4,692,080	+				-0.1
4,692,081	+				+0.3
4,692,088	-				-1.0
4,692,088	-				+1.3
4,692,094	+				+0.4
4,692,094	+				+0.7
4,692,094	+				+0.1
4,692,099	+				-0.9
4,692,107	-		GFF4690	0.12	+1.2
4,692,118	+		GFF4690	0.16	+0.3
4,692,161	+		GFF4690	0.32	+1.3
4,692,161	+		GFF4690	0.32	+0.0
4,692,169	-		GFF4690	0.35	-0.2
4,692,187	-		GFF4690	0.42	+0.4
4,692,195	-		GFF4690	0.45	-0.4
4,692,207	+		GFF4690	0.50	+0.9
4,692,241	+		GFF4690	0.62	-0.4
4,692,244	-		GFF4690	0.64	-0.5
4,692,244	-		GFF4690	0.64	+1.0
4,692,249	-		GFF4690	0.66	+0.1
4,692,277	-		GFF4690	0.76	+1.1
4,692,287	-		GFF4690	0.80	+0.5
4,692,309	+		GFF4690	0.88	+0.1
4,692,309	+		GFF4690	0.88	-0.7
4,692,317	-				-0.4
4,692,317	-				-0.9
4,692,317	-				+0.1
4,692,317	-				-1.0
4,692,322	+				+0.8
4,692,322	+				-0.1
4,692,322	+				+0.7
4,692,330	-				-1.7
4,692,356	-				-0.4
4,692,411	-				-0.9
4,692,505	+		GFF4691	0.13	+0.3
4,692,511	+		GFF4691	0.14	+1.0
4,692,525	+		GFF4691	0.15	-0.7
4,692,525	+		GFF4691	0.15	+0.4
4,692,531	+		GFF4691	0.16	+0.8
4,692,533	-		GFF4691	0.16	+0.1
4,692,534	+		GFF4691	0.16	+0.0
4,692,537	-		GFF4691	0.16	+0.3
4,692,553	-		GFF4691	0.18	-1.5
4,692,592	+		GFF4691	0.22	+0.0
4,692,594	-		GFF4691	0.22	+1.2
4,692,599	+		GFF4691	0.22	+0.2
4,692,609	+		GFF4691	0.23	+1.5
4,692,609	+		GFF4691	0.23	+0.3
4,692,660	-		GFF4691	0.28	-1.7
4,692,663	+		GFF4691	0.29	-1.8
4,692,668	+		GFF4691	0.29	+0.4
4,692,668	+		GFF4691	0.29	+0.1
4,692,676	-		GFF4691	0.30	-2.2
4,692,676	-		GFF4691	0.30	+1.8
4,692,679	+		GFF4691	0.30	-1.8
4,692,707	+		GFF4691	0.33	-0.7
4,692,707	+		GFF4691	0.33	-0.3
4,692,707	+		GFF4691	0.33	-2.2
4,692,715	-		GFF4691	0.34	-0.6
4,692,717	+		GFF4691	0.34	-0.4
4,692,723	+		GFF4691	0.34	+0.3
4,692,723	+		GFF4691	0.34	+0.9
4,692,724	+		GFF4691	0.34	+0.3
4,692,731	-		GFF4691	0.35	+1.7
4,692,731	-		GFF4691	0.35	-1.2
4,692,731	-		GFF4691	0.35	+0.2
4,692,736	-		GFF4691	0.36	+0.8
4,692,738	+		GFF4691	0.36	+1.1
4,692,753	+		GFF4691	0.37	+0.8
4,692,753	+		GFF4691	0.37	+0.4
4,692,758	+		GFF4691	0.38	+0.4
4,692,758	+		GFF4691	0.38	-1.8
4,692,758	+		GFF4691	0.38	+0.8
4,692,758	+		GFF4691	0.38	+0.3
4,692,758	+		GFF4691	0.38	+0.0
4,692,758	+		GFF4691	0.38	+0.8
4,692,758	+		GFF4691	0.38	+1.0
4,692,758	+		GFF4691	0.38	+1.1
4,692,758	+		GFF4691	0.38	-0.4
4,692,758	+		GFF4691	0.38	+0.5
4,692,761	-		GFF4691	0.38	+0.5
4,692,761	-		GFF4691	0.38	-1.2
4,692,761	-		GFF4691	0.38	-0.5
4,692,761	-		GFF4691	0.38	-0.4
4,692,761	-		GFF4691	0.38	+0.7
4,692,766	-		GFF4691	0.38	+0.6
4,692,766	-		GFF4691	0.38	-0.3
4,692,771	-		GFF4691	0.39	-0.3
4,692,800	+		GFF4691	0.42	+0.3
4,692,808	-		GFF4691	0.42	-0.1
4,692,808	-		GFF4691	0.42	+0.6
4,692,826	+		GFF4691	0.44	+1.3
4,692,826	+		GFF4691	0.44	+2.3
4,692,834	-		GFF4691	0.45	-0.2
4,692,838	+		GFF4691	0.45	-1.6
4,692,846	-		GFF4691	0.46	+0.5
4,692,846	-		GFF4691	0.46	+0.2
4,692,846	-		GFF4691	0.46	-0.3
4,692,858	-		GFF4691	0.47	-0.6
4,692,866	+		GFF4691	0.48	-0.7
4,692,866	+		GFF4691	0.48	+0.8
4,692,866	+		GFF4691	0.48	+0.3
4,692,874	-		GFF4691	0.49	-0.9
4,692,874	-		GFF4691	0.49	-2.1
4,692,880	-		GFF4691	0.49	+1.0
4,692,886	-		GFF4691	0.50	+0.1
4,692,891	-		GFF4691	0.50	+1.2
4,692,891	-		GFF4691	0.50	+0.4
4,692,892	+		GFF4691	0.51	+0.2
4,692,900	-		GFF4691	0.51	-1.4
4,692,900	-		GFF4691	0.51	+0.0
4,692,905	-		GFF4691	0.52	+0.1
4,692,905	-		GFF4691	0.52	+0.1
4,692,915	-		GFF4691	0.53	+1.7
4,692,928	+		GFF4691	0.54	-0.3
4,692,928	+		GFF4691	0.54	-0.3
4,692,934	-		GFF4691	0.55	+0.1
4,692,936	+		GFF4691	0.55	-1.9
4,692,941	+		GFF4691	0.55	+1.2
4,692,947	+		GFF4691	0.56	+0.4
4,692,947	+		GFF4691	0.56	-1.3
4,692,947	+		GFF4691	0.56	-1.5
4,692,947	+		GFF4691	0.56	-0.7
4,692,947	+		GFF4691	0.56	+1.1
4,692,947	+		GFF4691	0.56	-1.7
4,692,947	+		GFF4691	0.56	-0.3
4,692,954	+		GFF4691	0.57	+0.0
4,692,955	-		GFF4691	0.57	+1.1
4,692,955	-		GFF4691	0.57	+0.3
4,692,955	-		GFF4691	0.57	+1.2
4,692,955	-		GFF4691	0.57	+0.3
4,692,955	-		GFF4691	0.57	-1.5
4,692,955	-		GFF4691	0.57	-1.7
4,692,955	-		GFF4691	0.57	+0.0
4,692,978	-		GFF4691	0.59	+1.1
4,692,978	-		GFF4691	0.59	+1.1
4,692,983	+		GFF4691	0.59	+1.4
4,692,999	+		GFF4691	0.61	-0.9
4,693,005	+		GFF4691	0.61	-0.2
4,693,005	+		GFF4691	0.61	-0.5
4,693,007	-		GFF4691	0.62	+0.2
4,693,008	+		GFF4691	0.62	-0.1
4,693,008	-		GFF4691	0.62	+0.4
4,693,008	-		GFF4691	0.62	-1.9
4,693,013	-		GFF4691	0.62	-0.5
4,693,013	-		GFF4691	0.62	+0.8
4,693,026	+		GFF4691	0.63	+0.9
4,693,026	+		GFF4691	0.63	-1.5
4,693,026	+		GFF4691	0.63	-2.2
4,693,026	+		GFF4691	0.63	-1.1
4,693,034	-		GFF4691	0.64	+0.6
4,693,034	-		GFF4691	0.64	-1.7
4,693,034	-		GFF4691	0.64	+0.8
4,693,036	+		GFF4691	0.64	+1.5
4,693,083	-		GFF4691	0.69	+0.1
4,693,085	-		GFF4691	0.69	+0.4
4,693,105	+		GFF4691	0.71	+0.9
4,693,126	-		GFF4691	0.73	-1.5
4,693,127	-		GFF4691	0.73	-0.1
4,693,127	-		GFF4691	0.73	+1.2
4,693,127	-		GFF4691	0.73	+0.3
4,693,131	+		GFF4691	0.74	+1.3
4,693,133	+		GFF4691	0.74	+1.0
4,693,138	+		GFF4691	0.74	+0.3
4,693,138	+		GFF4691	0.74	-0.1
4,693,139	-		GFF4691	0.74	-1.0
4,693,139	-		GFF4691	0.74	+1.0
4,693,141	-		GFF4691	0.75	-0.8
4,693,146	-		GFF4691	0.75	+1.3
4,693,146	-		GFF4691	0.75	-1.1
4,693,166	+		GFF4691	0.77	+0.1
4,693,166	+		GFF4691	0.77	+1.3
4,693,169	+		GFF4691	0.77	-1.1
4,693,169	+		GFF4691	0.77	+0.3
4,693,177	-		GFF4691	0.78	+0.2
4,693,194	+		GFF4691	0.80	+0.9
4,693,206	+		GFF4691	0.81	+0.3
4,693,214	-		GFF4691	0.82	+0.1
4,693,226	+		GFF4691	0.83	-0.8
4,693,226	+		GFF4691	0.83	-1.0
4,693,226	+		GFF4691	0.83	+0.1
4,693,227	-		GFF4691	0.83	+0.3
4,693,234	-		GFF4691	0.84	-0.4
4,693,248	+		GFF4691	0.85	+0.8
4,693,256	-		GFF4691	0.86	+0.9
4,693,272	+		GFF4691	0.87	+0.2
4,693,296	+		GFF4691	0.89	+0.0
4,693,301	+				-0.1
4,693,308	+				-0.1
4,693,308	+				-0.2
4,693,315	+				+0.8
4,693,339	+				+0.6