Strain Fitness in Sphingobium sp. HT1-2 around GFF4685

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,684,845	-		GFF4684	0.74	-0.5
4,684,857	+		GFF4684	0.74	+0.3
4,684,870	-		GFF4684	0.74	-1.5
4,684,881	+		GFF4684	0.75	+1.1
4,684,891	+		GFF4684	0.75	-1.1
4,684,899	-		GFF4684	0.75	+0.0
4,684,903	+		GFF4684	0.76	+1.2
4,684,911	-		GFF4684	0.76	-1.6
4,684,924	+		GFF4684	0.76	+1.5
4,684,924	+		GFF4684	0.76	-0.0
4,684,924	+		GFF4684	0.76	-0.4
4,684,927	-		GFF4684	0.76	+0.3
4,684,932	-		GFF4684	0.77	-0.1
4,684,932	-		GFF4684	0.77	+0.1
4,684,932	-		GFF4684	0.77	+0.7
4,684,943	+		GFF4684	0.77	-0.6
4,684,948	+		GFF4684	0.77	-0.4
4,684,956	-		GFF4684	0.77	+1.1
4,685,013	+		GFF4684	0.79	-1.2
4,685,025	+		GFF4684	0.80	-0.3
4,685,033	+		GFF4684	0.80	+0.6
4,685,033	+		GFF4684	0.80	+2.5
4,685,033	-		GFF4684	0.80	+1.0
4,685,043	-		GFF4684	0.80	+0.5
4,685,049	+		GFF4684	0.81	-0.4
4,685,050	+		GFF4684	0.81	+0.3
4,685,050	+		GFF4684	0.81	-0.1
4,685,050	+		GFF4684	0.81	-0.6
4,685,050	+		GFF4684	0.81	+1.7
4,685,050	+		GFF4684	0.81	+1.2
4,685,050	+		GFF4684	0.81	+0.9
4,685,057	-		GFF4684	0.81	+0.8
4,685,057	-		GFF4684	0.81	+0.7
4,685,057	-		GFF4684	0.81	+1.2
4,685,057	-		GFF4684	0.81	-0.8
4,685,058	-		GFF4684	0.81	-0.0
4,685,058	-		GFF4684	0.81	+0.8
4,685,058	-		GFF4684	0.81	+0.6
4,685,059	-		GFF4684	0.81	-1.9
4,685,081	-		GFF4684	0.82	-0.6
4,685,082	+		GFF4684	0.82	+0.0
4,685,090	-		GFF4684	0.82	-0.4
4,685,090	-		GFF4684	0.82	+0.7
4,685,090	-		GFF4684	0.82	-0.3
4,685,090	-		GFF4684	0.82	-0.9
4,685,107	+		GFF4684	0.83	+1.1
4,685,121	-		GFF4684	0.83	-0.4
4,685,130	+		GFF4684	0.83	-0.2
4,685,130	+		GFF4684	0.83	-0.2
4,685,130	+		GFF4684	0.83	+0.5
4,685,130	+		GFF4684	0.83	-0.6
4,685,130	+		GFF4684	0.83	+0.8
4,685,130	+		GFF4684	0.83	+1.0
4,685,130	+		GFF4684	0.83	+0.3
4,685,130	+		GFF4684	0.83	-0.8
4,685,134	+		GFF4684	0.84	-1.4
4,685,137	+		GFF4684	0.84	-2.2
4,685,138	-		GFF4684	0.84	+1.0
4,685,138	-		GFF4684	0.84	-0.0
4,685,138	-		GFF4684	0.84	+0.1
4,685,138	-		GFF4684	0.84	-1.5
4,685,138	-		GFF4684	0.84	+0.8
4,685,138	-		GFF4684	0.84	-0.4
4,685,140	+		GFF4684	0.84	-0.3
4,685,148	-		GFF4684	0.84	+0.3
4,685,148	-		GFF4684	0.84	-1.5
4,685,148	-		GFF4684	0.84	+1.5
4,685,150	+		GFF4684	0.84	-1.4
4,685,150	+		GFF4684	0.84	+0.5
4,685,158	-		GFF4684	0.84	-0.9
4,685,158	-		GFF4684	0.84	+0.3
4,685,210	+		GFF4684	0.86	+0.4
4,685,210	+		GFF4684	0.86	-0.7
4,685,210	+		GFF4684	0.86	-0.4
4,685,210	+		GFF4684	0.86	-0.2
4,685,218	-		GFF4684	0.87	-0.5
4,685,218	-		GFF4684	0.87	+1.4
4,685,218	-		GFF4684	0.87	+0.7
4,685,222	+		GFF4684	0.87	+1.4
4,685,227	+		GFF4684	0.87	+0.9
4,685,227	+		GFF4684	0.87	-0.1
4,685,227	+		GFF4684	0.87	+0.8
4,685,227	+		GFF4684	0.87	-0.5
4,685,227	+		GFF4684	0.87	+0.6
4,685,227	+		GFF4684	0.87	+0.6
4,685,235	+		GFF4684	0.87	-0.2
4,685,235	+		GFF4684	0.87	+1.1
4,685,235	-		GFF4684	0.87	-0.3
4,685,235	-		GFF4684	0.87	+0.3
4,685,235	-		GFF4684	0.87	-0.3
4,685,235	-		GFF4684	0.87	+0.3
4,685,235	-		GFF4684	0.87	+0.8
4,685,235	-		GFF4684	0.87	+0.4
4,685,235	-		GFF4684	0.87	+0.9
4,685,243	-		GFF4684	0.87	+0.4
4,685,264	+		GFF4684	0.88	+0.4
4,685,301	+		GFF4684	0.89	-2.4
4,685,311	+		GFF4684	0.90	+0.1
4,685,313	+		GFF4684	0.90	+0.4
4,685,321	+				-1.0
4,685,321	+				+0.8
4,685,326	+				+0.0
4,685,332	+				-0.3
4,685,340	-				-0.2
4,685,340	-				-0.6
4,685,340	-				+1.6
4,685,342	-				+0.4
4,685,342	-				-0.9
4,685,355	-				-0.2
4,685,392	+				+1.1
4,685,413	+				+0.4
4,685,413	+				-1.4
4,685,413	+				+1.4
4,685,413	+				-0.4
4,685,413	+				-0.7
4,685,413	+				+0.4
4,685,413	+				+0.2
4,685,413	+				-2.0
4,685,413	+				+0.3
4,685,413	+				+0.5
4,685,421	-				-0.0
4,685,421	-				-0.2
4,685,421	-				+0.6
4,685,421	-				-0.4
4,685,421	-				-0.2
4,685,421	-				-0.3
4,685,431	-				+0.1
4,685,443	+				+0.6
4,685,465	+				+0.0
4,685,484	+				+0.0
4,685,484	+				-0.6
4,685,484	+				+0.1
4,685,492	-				-0.0
4,685,492	-				-0.6
4,685,492	-				+0.6
4,685,494	+				+1.0
4,685,503	+				+0.0
4,685,504	+				-0.8
4,685,504	+				-1.0
4,685,512	-				+1.1
4,685,518	+				-0.6
4,685,526	-				+0.5
4,685,590	+				-1.6
4,685,590	+				+0.7
4,685,598	-				-0.5
4,685,598	-				+1.8
4,685,636	-				+0.4
4,685,672	-				-2.0
4,685,681	-				+0.1
4,685,697	-				+1.1
4,685,730	-				+0.6
4,685,730	-				-1.0
4,685,730	-				-0.8
4,685,749	-				+1.5
4,685,749	-				+1.6
4,685,749	-				+0.6
4,685,750	+				+0.2
4,685,750	+				-1.7
4,685,753	-				-2.0
4,685,761	-				+0.7
4,685,775	-				+0.1
4,685,785	-				+1.2
4,685,804	+				+0.7
4,685,804	+				+0.3
4,685,804	+				-1.0
4,685,804	+				+1.0
4,685,809	+				-0.5
4,685,812	-				+1.6
4,685,812	-				+0.7
4,685,812	-				+0.3
4,685,844	+				-0.0
4,685,848	+				-2.8
4,685,856	-				-0.0
4,685,869	+				+1.0
4,685,870	+				+0.1
4,685,910	+				+0.4
4,685,914	-				+0.1
4,685,929	+				-0.5
4,685,937	-				-1.0
4,685,937	-				-1.7
4,685,955	+				-0.1
4,685,955	+				-0.2
4,685,963	-				+0.3
4,685,974	+				+1.3
4,685,984	-				+0.0
4,685,984	-				+0.6
4,686,044	+		GFF4685	0.12	+0.3
4,686,052	-		GFF4685	0.13	-0.5
4,686,053	-		GFF4685	0.13	+0.1
4,686,068	+		GFF4685	0.14	+0.3
4,686,083	+		GFF4685	0.15	-0.2
4,686,110	+		GFF4685	0.16	-1.2
4,686,112	+		GFF4685	0.16	-0.2
4,686,112	+		GFF4685	0.16	+1.1
4,686,120	-		GFF4685	0.17	-0.9
4,686,120	-		GFF4685	0.17	-0.5
4,686,122	-		GFF4685	0.17	-1.0
4,686,122	-		GFF4685	0.17	-0.1
4,686,127	+		GFF4685	0.17	-0.9
4,686,135	-		GFF4685	0.18	-0.7
4,686,192	+		GFF4685	0.21	+0.8
4,686,192	+		GFF4685	0.21	+0.5
4,686,200	-		GFF4685	0.22	+0.8
4,686,218	+		GFF4685	0.23	-0.6
4,686,226	-		GFF4685	0.23	+0.4
4,686,228	+		GFF4685	0.23	+0.6
4,686,239	-		GFF4685	0.24	+0.7
4,686,240	+		GFF4685	0.24	-0.3
4,686,248	-		GFF4685	0.25	-0.1
4,686,255	+		GFF4685	0.25	+1.1
4,686,263	-		GFF4685	0.26	+1.2
4,686,268	-		GFF4685	0.26	+0.5
4,686,277	+		GFF4685	0.26	-0.1
4,686,278	+		GFF4685	0.27	-2.9
4,686,284	+		GFF4685	0.27	-0.1
4,686,284	+		GFF4685	0.27	+0.2
4,686,284	+		GFF4685	0.27	+0.7
4,686,284	+		GFF4685	0.27	-0.3
4,686,284	+		GFF4685	0.27	+0.8
4,686,284	+		GFF4685	0.27	+1.1
4,686,284	+		GFF4685	0.27	+0.0
4,686,286	-		GFF4685	0.27	-2.0
4,686,286	-		GFF4685	0.27	+0.7
4,686,292	-		GFF4685	0.27	+0.7
4,686,292	-		GFF4685	0.27	+1.7
4,686,292	-		GFF4685	0.27	+1.1
4,686,292	-		GFF4685	0.27	+0.7
4,686,324	+		GFF4685	0.29	+0.9
4,686,337	-		GFF4685	0.30	-0.5
4,686,347	-		GFF4685	0.31	+1.1
4,686,347	-		GFF4685	0.31	+1.0
4,686,381	+		GFF4685	0.33	-0.3
4,686,381	+		GFF4685	0.33	+0.1
4,686,389	+		GFF4685	0.33	+0.1
4,686,389	-		GFF4685	0.33	+0.4
4,686,397	-		GFF4685	0.34	+0.5
4,686,397	-		GFF4685	0.34	+0.1
4,686,400	+		GFF4685	0.34	+1.0
4,686,404	+		GFF4685	0.34	+0.4
4,686,404	+		GFF4685	0.34	-2.0
4,686,406	-		GFF4685	0.34	+0.5
4,686,412	-		GFF4685	0.35	+1.8
4,686,412	-		GFF4685	0.35	+1.0
4,686,419	+		GFF4685	0.35	-0.7
4,686,421	+		GFF4685	0.35	-0.4
4,686,429	-		GFF4685	0.36	-1.6
4,686,579	-		GFF4685	0.45	+1.2
4,686,618	+		GFF4685	0.47	-0.2
4,686,618	+		GFF4685	0.47	-0.9
4,686,618	+		GFF4685	0.47	-1.5
4,686,618	+		GFF4685	0.47	-1.9
4,686,618	+		GFF4685	0.47	-0.6
4,686,618	+		GFF4685	0.47	+1.0
4,686,625	+		GFF4685	0.48	+0.0
4,686,626	-		GFF4685	0.48	+0.7
4,686,631	-		GFF4685	0.48	-0.3
4,686,635	+		GFF4685	0.48	+2.2
4,686,635	+		GFF4685	0.48	-1.7
4,686,635	+		GFF4685	0.48	+0.1
4,686,635	+		GFF4685	0.48	+0.1
4,686,643	-		GFF4685	0.49	-0.1
4,686,643	-		GFF4685	0.49	+1.6
4,686,660	+		GFF4685	0.50	+1.2
4,686,662	+		GFF4685	0.50	-0.0
4,686,662	+		GFF4685	0.50	+0.1
4,686,667	+		GFF4685	0.50	+0.0
4,686,668	-		GFF4685	0.50	-2.3
4,686,668	-		GFF4685	0.50	-0.6
4,686,668	-		GFF4685	0.50	-1.6
4,686,670	-		GFF4685	0.51	+0.0
4,686,670	-		GFF4685	0.51	+0.8
4,686,675	-		GFF4685	0.51	-1.6
4,686,675	-		GFF4685	0.51	+1.0
4,686,675	-		GFF4685	0.51	-0.0
4,686,683	-		GFF4685	0.51	-0.1
4,686,685	-		GFF4685	0.51	+1.3
4,686,755	+		GFF4685	0.56	-0.5
4,686,795	+		GFF4685	0.58	-0.1
4,686,795	+		GFF4685	0.58	-0.5
4,686,795	+		GFF4685	0.58	-1.0
4,686,800	+		GFF4685	0.59	+0.9
4,686,800	+		GFF4685	0.59	+1.5
4,686,805	+		GFF4685	0.59	-0.3
4,686,805	+		GFF4685	0.59	+0.6
4,686,805	+		GFF4685	0.59	-0.0
4,686,805	+		GFF4685	0.59	+1.0
4,686,805	+		GFF4685	0.59	-0.9
4,686,805	+		GFF4685	0.59	-1.6
4,686,808	-		GFF4685	0.59	-0.6
4,686,812	+		GFF4685	0.59	+0.4
4,686,813	-		GFF4685	0.59	+0.7
4,686,813	-		GFF4685	0.59	+0.5
4,686,813	-		GFF4685	0.59	+0.8
4,686,813	-		GFF4685	0.59	+0.5
4,686,813	-		GFF4685	0.59	+1.7
4,686,820	-		GFF4685	0.60	+0.2
4,686,823	-		GFF4685	0.60	+0.5
4,686,830	-		GFF4685	0.60	+1.0
4,686,849	+		GFF4685	0.62	+0.4
4,686,857	-		GFF4685	0.62	+0.5
4,686,857	-		GFF4685	0.62	+0.5
4,686,861	+		GFF4685	0.62	-1.4
4,686,861	+		GFF4685	0.62	-1.3
4,686,869	-		GFF4685	0.63	+0.7
4,686,876	-		GFF4685	0.63	-1.7
4,686,917	+		GFF4685	0.66	+1.4
4,686,917	+		GFF4685	0.66	+0.2
4,686,917	+		GFF4685	0.66	+0.5
4,686,917	+		GFF4685	0.66	+0.2
4,686,925	-		GFF4685	0.66	+0.1
4,686,938	+		GFF4685	0.67	+1.0
4,686,938	+		GFF4685	0.67	+0.5
4,686,938	+		GFF4685	0.67	+0.3
4,686,938	+		GFF4685	0.67	+0.1
4,686,938	+		GFF4685	0.67	+0.7
4,686,946	-		GFF4685	0.67	+0.6
4,686,946	-		GFF4685	0.67	+2.0
4,686,946	-		GFF4685	0.67	+2.4
4,686,946	-		GFF4685	0.67	+0.2
4,686,993	-		GFF4685	0.70	-0.1
4,686,993	-		GFF4685	0.70	+1.1
4,687,009	+		GFF4685	0.71	+1.0
4,687,025	+		GFF4685	0.72	+1.2
4,687,078	-		GFF4685	0.76	-0.2
4,687,080	+		GFF4685	0.76	+0.3
4,687,080	+		GFF4685	0.76	+0.3
4,687,082	-		GFF4685	0.76	-0.4
4,687,088	+		GFF4685	0.76	+0.1
4,687,098	+		GFF4685	0.77	-0.6
4,687,098	+		GFF4685	0.77	-0.7
4,687,098	+		GFF4685	0.77	-0.1
4,687,098	+		GFF4685	0.77	+0.6
4,687,106	-		GFF4685	0.77	+0.7
4,687,134	-		GFF4685	0.79	+0.6
4,687,135	-		GFF4685	0.79	+1.0
4,687,145	+		GFF4685	0.80	+1.0
4,687,145	+		GFF4685	0.80	-0.7
4,687,145	+		GFF4685	0.80	-1.6
4,687,145	+		GFF4685	0.80	-0.2
4,687,145	+		GFF4685	0.80	+0.4
4,687,145	+		GFF4685	0.80	+0.4
4,687,145	+		GFF4685	0.80	-0.1
4,687,145	+		GFF4685	0.80	+0.4
4,687,145	+		GFF4685	0.80	-0.4
4,687,153	-		GFF4685	0.80	+2.0
4,687,153	-		GFF4685	0.80	+0.8
4,687,153	-		GFF4685	0.80	+1.2
4,687,153	-		GFF4685	0.80	+0.1
4,687,153	-		GFF4685	0.80	+0.1
4,687,153	-		GFF4685	0.80	+0.2
4,687,153	-		GFF4685	0.80	+0.4
4,687,153	-		GFF4685	0.80	+0.9
4,687,153	-		GFF4685	0.80	-0.0
4,687,153	-		GFF4685	0.80	+0.4
4,687,153	-		GFF4685	0.80	+0.5
4,687,153	-		GFF4685	0.80	-0.0
4,687,155	+		GFF4685	0.80	+0.3
4,687,176	+		GFF4685	0.82	-0.4
4,687,177	+		GFF4685	0.82	-1.5
4,687,177	+		GFF4685	0.82	+0.8
4,687,194	+		GFF4685	0.83	+1.1
4,687,198	-		GFF4685	0.83	-0.3
4,687,202	-		GFF4685	0.83	+0.1
4,687,202	-		GFF4685	0.83	-0.2
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