Strain Fitness in Sphingobium sp. HT1-2 around GFF4510

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,502,076	+		GFF4509	0.38	-0.0
4,502,081	+		GFF4509	0.38	-0.1
4,502,089	-		GFF4509	0.39	-2.3
4,502,089	-		GFF4509	0.39	-0.8
4,502,089	-		GFF4509	0.39	+1.0
4,502,089	-		GFF4509	0.39	-1.6
4,502,089	-		GFF4509	0.39	-0.2
4,502,121	+		GFF4509	0.41	-0.6
4,502,121	+		GFF4509	0.41	-0.1
4,502,121	+		GFF4509	0.41	+1.1
4,502,127	+		GFF4509	0.41	+1.1
4,502,135	+		GFF4509	0.42	-0.4
4,502,135	+		GFF4509	0.42	+0.1
4,502,135	-		GFF4509	0.42	-0.5
4,502,147	+		GFF4509	0.43	-0.5
4,502,147	+		GFF4509	0.43	-0.3
4,502,147	+		GFF4509	0.43	-1.0
4,502,147	+		GFF4509	0.43	-0.4
4,502,147	+		GFF4509	0.43	-0.2
4,502,147	+		GFF4509	0.43	-0.5
4,502,147	+		GFF4509	0.43	+0.4
4,502,147	+		GFF4509	0.43	+0.6
4,502,147	+		GFF4509	0.43	-0.7
4,502,147	+		GFF4509	0.43	-0.1
4,502,147	+		GFF4509	0.43	+0.1
4,502,147	+		GFF4509	0.43	-0.6
4,502,147	+		GFF4509	0.43	-1.1
4,502,147	+		GFF4509	0.43	+0.4
4,502,147	+		GFF4509	0.43	+0.0
4,502,147	+		GFF4509	0.43	-3.1
4,502,151	-		GFF4509	0.43	+0.6
4,502,152	+		GFF4509	0.43	+0.2
4,502,155	-		GFF4509	0.43	-1.4
4,502,155	-		GFF4509	0.43	+0.8
4,502,155	-		GFF4509	0.43	+0.7
4,502,155	-		GFF4509	0.43	-1.7
4,502,155	-		GFF4509	0.43	-0.0
4,502,155	-		GFF4509	0.43	-0.5
4,502,155	-		GFF4509	0.43	-0.8
4,502,155	-		GFF4509	0.43	-0.1
4,502,155	-		GFF4509	0.43	-2.0
4,502,155	-		GFF4509	0.43	-0.8
4,502,155	-		GFF4509	0.43	-0.1
4,502,155	-		GFF4509	0.43	+1.1
4,502,155	-		GFF4509	0.43	-0.9
4,502,155	-		GFF4509	0.43	-0.0
4,502,155	-		GFF4509	0.43	+0.3
4,502,164	+		GFF4509	0.44	-0.1
4,502,178	+		GFF4509	0.45	-0.9
4,502,184	-		GFF4509	0.45	-0.6
4,502,197	-		GFF4509	0.46	+0.6
4,502,211	+		GFF4509	0.47	-0.3
4,502,211	+		GFF4509	0.47	-2.1
4,502,212	-		GFF4509	0.47	+0.1
4,502,219	-		GFF4509	0.48	+0.4
4,502,248	+		GFF4509	0.50	-0.9
4,502,266	-		GFF4509	0.51	+1.7
4,502,281	+		GFF4509	0.52	-0.0
4,502,306	+		GFF4509	0.54	-0.2
4,502,316	+		GFF4509	0.55	+0.7
4,502,316	+		GFF4509	0.55	-0.8
4,502,316	+		GFF4509	0.55	+0.6
4,502,323	-		GFF4509	0.55	-0.2
4,502,325	+		GFF4509	0.55	-0.5
4,502,325	+		GFF4509	0.55	+0.4
4,502,325	+		GFF4509	0.55	+0.7
4,502,325	+		GFF4509	0.55	+0.4
4,502,327	+		GFF4509	0.56	-0.4
4,502,333	-		GFF4509	0.56	+0.5
4,502,333	-		GFF4509	0.56	-0.5
4,502,333	-		GFF4509	0.56	-2.3
4,502,333	-		GFF4509	0.56	-0.2
4,502,333	-		GFF4509	0.56	+0.1
4,502,333	-		GFF4509	0.56	-0.4
4,502,333	-		GFF4509	0.56	+0.9
4,502,371	-		GFF4509	0.59	+0.8
4,502,393	-		GFF4509	0.60	+0.4
4,502,398	-		GFF4509	0.61	-0.5
4,502,408	-		GFF4509	0.61	+0.5
4,502,408	-		GFF4509	0.61	-1.4
4,502,408	-		GFF4509	0.61	-0.1
4,502,433	-		GFF4509	0.63	-0.9
4,502,451	+		GFF4509	0.64	-1.2
4,502,451	+		GFF4509	0.64	-0.4
4,502,459	-		GFF4509	0.65	+0.3
4,502,464	-		GFF4509	0.65	+1.0
4,502,467	+		GFF4509	0.65	-0.2
4,502,467	+		GFF4509	0.65	+0.8
4,502,467	+		GFF4509	0.65	+1.1
4,502,469	+		GFF4509	0.66	+1.2
4,502,469	+		GFF4509	0.66	-1.2
4,502,469	+		GFF4509	0.66	+0.4
4,502,469	+		GFF4509	0.66	-0.4
4,502,469	+		GFF4509	0.66	-1.6
4,502,473	-		GFF4509	0.66	+0.7
4,502,475	-		GFF4509	0.66	+1.4
4,502,477	-		GFF4509	0.66	-0.3
4,502,477	-		GFF4509	0.66	-0.7
4,502,477	-		GFF4509	0.66	-0.6
4,502,477	-		GFF4509	0.66	+0.1
4,502,477	-		GFF4509	0.66	+0.2
4,502,484	+		GFF4509	0.67	-0.0
4,502,489	+		GFF4509	0.67	+0.8
4,502,489	+		GFF4509	0.67	-2.2
4,502,489	+		GFF4509	0.67	-0.4
4,502,489	+		GFF4509	0.67	-1.7
4,502,492	-		GFF4509	0.67	-2.4
4,502,494	+		GFF4509	0.67	+0.0
4,502,494	+		GFF4509	0.67	-1.5
4,502,497	-		GFF4509	0.68	+0.5
4,502,502	-		GFF4509	0.68	+0.6
4,502,502	-		GFF4509	0.68	+0.2
4,502,502	-		GFF4509	0.68	+0.5
4,502,502	-		GFF4509	0.68	+0.6
4,502,512	+		GFF4509	0.69	+0.5
4,502,543	+		GFF4509	0.71	+0.5
4,502,569	+		GFF4509	0.73	-0.0
4,502,569	+		GFF4509	0.73	+0.2
4,502,577	-		GFF4509	0.73	-2.6
4,502,577	-		GFF4509	0.73	+1.3
4,502,577	-		GFF4509	0.73	+0.4
4,502,587	+		GFF4509	0.74	-0.7
4,502,592	+		GFF4509	0.74	+0.1
4,502,592	+		GFF4509	0.74	+0.1
4,502,600	-		GFF4509	0.75	-0.9
4,502,608	-		GFF4509	0.75	-0.6
4,502,615	+		GFF4509	0.76	+1.1
4,502,617	+		GFF4509	0.76	-0.5
4,502,617	+		GFF4509	0.76	+0.5
4,502,617	+		GFF4509	0.76	-0.0
4,502,620	-		GFF4509	0.76	-0.0
4,502,625	+		GFF4509	0.77	-0.9
4,502,625	-		GFF4509	0.77	+0.5
4,502,633	+		GFF4509	0.77	+0.8
4,502,638	+		GFF4509	0.78	-0.5
4,502,639	+		GFF4509	0.78	+0.6
4,502,641	-		GFF4509	0.78	-0.6
4,502,649	+		GFF4509	0.78	+0.5
4,502,651	-		GFF4509	0.78	-1.0
4,502,651	-		GFF4509	0.78	+0.2
4,502,657	-		GFF4509	0.79	-2.0
4,502,657	-		GFF4509	0.79	+0.8
4,502,657	-		GFF4509	0.79	-1.3
4,502,668	-		GFF4509	0.80	+0.5
4,502,687	+		GFF4509	0.81	+0.4
4,502,689	+		GFF4509	0.81	+0.1
4,502,695	-		GFF4509	0.82	-0.2
4,502,695	-		GFF4509	0.82	-0.4
4,502,695	-		GFF4509	0.82	-0.1
4,502,695	-		GFF4509	0.82	-0.9
4,502,697	+		GFF4509	0.82	-0.0
4,502,700	-		GFF4509	0.82	-2.4
4,502,705	-		GFF4509	0.82	-1.7
4,502,728	-		GFF4509	0.84	-2.0
4,502,741	-		GFF4509	0.85	-1.6
4,502,742	-		GFF4509	0.85	+0.1
4,502,742	-		GFF4509	0.85	+0.2
4,502,742	-		GFF4509	0.85	-1.0
4,502,763	+		GFF4509	0.86	-0.6
4,502,771	+		GFF4509	0.87	-0.2
4,502,771	-		GFF4509	0.87	-0.6
4,502,794	-		GFF4509	0.89	-1.5
4,502,794	-		GFF4509	0.89	+0.1
4,502,799	-		GFF4509	0.89	-1.3
4,502,823	-				-2.1
4,502,846	+				-1.4
4,502,851	+				+0.6
4,502,851	+				-0.2
4,502,853	+				-1.0
4,502,859	-				-0.4
4,502,859	-				-0.9
4,502,859	-				-0.3
4,502,859	-				+0.5
4,502,859	-				+0.4
4,502,859	-				+0.0
4,502,870	+				+0.4
4,502,873	+				-1.5
4,502,873	+				+0.5
4,502,874	+				-0.2
4,502,874	+				+0.1
4,502,881	-				+1.4
4,502,885	+				-0.3
4,502,920	-				+0.4
4,502,934	+				-2.0
4,502,943	+				-1.0
4,502,943	-				-0.5
4,502,956	+				-0.9
4,502,956	+				+0.0
4,502,956	+				-2.4
4,502,957	+				+0.6
4,502,964	-				-0.1
4,502,964	-				+0.4
4,502,988	-				-0.4
4,502,998	+				-0.5
4,503,035	-				+0.7
4,503,041	-				-0.8
4,503,058	+				-1.0
4,503,083	-				-0.5
4,503,088	+				+0.4
4,503,095	-				-0.7
4,503,096	-				-0.1
4,503,127	-				-0.4
4,503,127	-				+1.0
4,503,129	-				+0.3
4,503,129	-				-1.5
4,503,137	-				+0.1
4,503,137	-				+0.6
4,503,146	+				-0.9
4,503,148	-				-0.4
4,503,153	-				+0.0
4,503,155	+				-0.2
4,503,155	+				-0.2
4,503,155	+				-0.7
4,503,155	+				-1.5
4,503,155	+				+0.3
4,503,161	+				+0.1
4,503,161	+				+0.2
4,503,163	-				-1.6
4,503,163	-				-1.0
4,503,163	-				-0.5
4,503,163	-				+0.6
4,503,163	-				-0.7
4,503,163	-				-0.7
4,503,169	-		GFF4510	0.10	+0.6
4,503,169	-		GFF4510	0.10	+0.7
4,503,169	-		GFF4510	0.10	-1.2
4,503,169	-		GFF4510	0.10	+0.1
4,503,185	-		GFF4510	0.12	+1.1
4,503,185	-		GFF4510	0.12	-1.3
4,503,199	+		GFF4510	0.13	-1.4
4,503,199	+		GFF4510	0.13	+0.0
4,503,199	+		GFF4510	0.13	-2.1
4,503,199	+		GFF4510	0.13	-0.8
4,503,199	+		GFF4510	0.13	+0.3
4,503,199	+		GFF4510	0.13	+1.5
4,503,199	+		GFF4510	0.13	+0.3
4,503,199	+		GFF4510	0.13	-1.0
4,503,199	+		GFF4510	0.13	+0.2
4,503,199	+		GFF4510	0.13	+0.3
4,503,199	+		GFF4510	0.13	-2.3
4,503,199	+		GFF4510	0.13	-0.0
4,503,199	+		GFF4510	0.13	-0.5
4,503,199	+		GFF4510	0.13	+0.9
4,503,204	-		GFF4510	0.13	-0.5
4,503,207	-		GFF4510	0.14	-0.4
4,503,207	-		GFF4510	0.14	-0.9
4,503,207	-		GFF4510	0.14	-0.5
4,503,207	-		GFF4510	0.14	-0.4
4,503,207	-		GFF4510	0.14	-0.6
4,503,207	-		GFF4510	0.14	-0.1
4,503,207	-		GFF4510	0.14	+1.6
4,503,207	-		GFF4510	0.14	-1.0
4,503,207	-		GFF4510	0.14	-0.5
4,503,207	-		GFF4510	0.14	-0.1
4,503,207	-		GFF4510	0.14	+0.4
4,503,207	-		GFF4510	0.14	+1.0
4,503,207	-		GFF4510	0.14	+0.8
4,503,207	-		GFF4510	0.14	-0.0
4,503,207	-		GFF4510	0.14	-0.4
4,503,207	-		GFF4510	0.14	-1.6
4,503,207	-		GFF4510	0.14	+0.3
4,503,207	-		GFF4510	0.14	-0.4
4,503,207	-		GFF4510	0.14	+0.1
4,503,207	-		GFF4510	0.14	-2.0
4,503,207	-		GFF4510	0.14	-0.0
4,503,207	-		GFF4510	0.14	+1.1
4,503,207	-		GFF4510	0.14	-1.1
4,503,207	-		GFF4510	0.14	+0.7
4,503,207	-		GFF4510	0.14	-0.5
4,503,207	-		GFF4510	0.14	+0.1
4,503,207	-		GFF4510	0.14	+0.1
4,503,207	-		GFF4510	0.14	+0.5
4,503,207	-		GFF4510	0.14	-1.4
4,503,207	-		GFF4510	0.14	-0.5
4,503,207	-		GFF4510	0.14	-2.2
4,503,207	-		GFF4510	0.14	-0.2
4,503,207	-		GFF4510	0.14	-0.9
4,503,207	-		GFF4510	0.14	-0.5
4,503,218	+		GFF4510	0.15	-1.1
4,503,219	+		GFF4510	0.15	-0.3
4,503,227	-		GFF4510	0.15	-0.9
4,503,234	-		GFF4510	0.16	-0.8
4,503,260	-		GFF4510	0.18	+0.4
4,503,294	+		GFF4510	0.21	-1.0
4,503,354	-		GFF4510	0.27	+0.1
4,503,374	+		GFF4510	0.28	-0.8
4,503,382	-		GFF4510	0.29	-1.0
4,503,416	-		GFF4510	0.32	+0.4
4,503,421	-		GFF4510	0.32	-0.3
4,503,459	+		GFF4510	0.36	-1.1
4,503,467	-		GFF4510	0.36	+1.1
4,503,468	-		GFF4510	0.37	+0.5
4,503,483	+		GFF4510	0.38	+0.1
4,503,483	+		GFF4510	0.38	+1.0
4,503,491	-		GFF4510	0.39	-1.2
4,503,491	-		GFF4510	0.39	-1.2
4,503,499	+		GFF4510	0.39	+0.1
4,503,505	+		GFF4510	0.40	+0.4
4,503,505	+		GFF4510	0.40	-1.0
4,503,505	-		GFF4510	0.40	-0.5
4,503,509	+		GFF4510	0.40	-2.0
4,503,510	+		GFF4510	0.40	-0.5
4,503,513	-		GFF4510	0.41	+0.5
4,503,523	-		GFF4510	0.41	-0.7
4,503,526	+		GFF4510	0.42	-0.1
4,503,526	+		GFF4510	0.42	+0.3
4,503,526	+		GFF4510	0.42	-1.3
4,503,534	-		GFF4510	0.42	-0.3
4,503,534	-		GFF4510	0.42	-0.1
4,503,534	-		GFF4510	0.42	-0.3
4,503,534	-		GFF4510	0.42	-1.0
4,503,534	-		GFF4510	0.42	-0.3
4,503,534	-		GFF4510	0.42	+1.1
4,503,534	-		GFF4510	0.42	-0.7
4,503,534	-		GFF4510	0.42	-0.6
4,503,545	+		GFF4510	0.43	-0.0
4,503,545	+		GFF4510	0.43	-0.5
4,503,550	+		GFF4510	0.44	+1.3
4,503,550	+		GFF4510	0.44	-0.7
4,503,550	+		GFF4510	0.44	-0.0
4,503,550	+		GFF4510	0.44	-0.9
4,503,550	+		GFF4510	0.44	-0.5
4,503,553	-		GFF4510	0.44	-1.5
4,503,553	-		GFF4510	0.44	-0.4
4,503,553	-		GFF4510	0.44	-1.2
4,503,553	-		GFF4510	0.44	-0.5
4,503,553	-		GFF4510	0.44	+0.0
4,503,558	-		GFF4510	0.44	+0.0
4,503,558	-		GFF4510	0.44	-0.5
4,503,558	-		GFF4510	0.44	+0.4
4,503,558	-		GFF4510	0.44	-0.6
4,503,560	-		GFF4510	0.45	-1.5
4,503,565	+		GFF4510	0.45	-0.3
4,503,591	+		GFF4510	0.47	+0.3
4,503,594	+		GFF4510	0.48	-1.0
4,503,614	-		GFF4510	0.49	-0.1
4,503,614	-		GFF4510	0.49	-0.2
4,503,620	-		GFF4510	0.50	-1.6
4,503,653	+		GFF4510	0.53	+1.5
4,503,653	+		GFF4510	0.53	+0.1
4,503,653	+		GFF4510	0.53	-0.7
4,503,659	+		GFF4510	0.53	+0.4
4,503,662	-		GFF4510	0.54	-1.0
4,503,667	-		GFF4510	0.54	+0.6
4,503,682	+		GFF4510	0.55	+0.1
4,503,692	+		GFF4510	0.56	+0.8
4,503,692	+		GFF4510	0.56	+0.6
4,503,692	+		GFF4510	0.56	-0.1
4,503,692	+		GFF4510	0.56	-0.4
4,503,692	+		GFF4510	0.56	-0.8
4,503,700	-		GFF4510	0.57	-0.3
4,503,700	-		GFF4510	0.57	-0.4
4,503,700	-		GFF4510	0.57	-0.4
4,503,700	-		GFF4510	0.57	-1.4
4,503,700	-		GFF4510	0.57	-1.3
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