Strain Fitness in Sphingobium sp. HT1-2 around GFF4362

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,361,464	+				-0.1
4,361,468	+				-2.8
4,361,468	+				+0.3
4,361,476	-				-1.1
4,361,486	-				-0.3
4,361,487	+				-0.4
4,361,495	+				-1.2
4,361,495	+				-1.1
4,361,495	+				-1.1
4,361,495	+				-0.7
4,361,495	+				+0.1
4,361,495	+				-1.1
4,361,495	+				+1.1
4,361,503	-				-0.8
4,361,503	-				-0.4
4,361,503	-				-0.8
4,361,503	-				-0.2
4,361,503	-				-0.1
4,361,503	-				-0.7
4,361,507	+				-0.0
4,361,507	+				+0.4
4,361,513	-				-2.3
4,361,515	+				-0.7
4,361,516	+				+0.6
4,361,524	-				+0.4
4,361,524	-				-0.9
4,361,528	+				-0.5
4,361,531	-				+0.6
4,361,536	-				+0.5
4,361,542	+				-0.2
4,361,542	+				+0.4
4,361,544	+				-0.8
4,361,544	+				-2.0
4,361,550	-				+0.3
4,361,550	-				+0.8
4,361,550	-				-0.7
4,361,552	-				-0.3
4,361,552	-				-0.0
4,361,552	-				+0.5
4,361,557	-				+0.8
4,361,562	-				+0.2
4,361,592	+				-0.3
4,361,610	+				+0.3
4,361,610	+				+0.4
4,361,612	+				-1.0
4,361,640	+				+0.0
4,361,640	+				-0.3
4,361,640	-				+1.0
4,361,690	+		GFF4361	0.13	-1.8
4,361,698	-		GFF4361	0.14	-0.6
4,361,700	+		GFF4361	0.14	-1.6
4,361,708	-		GFF4361	0.15	-0.6
4,361,708	-		GFF4361	0.15	-1.2
4,361,708	-		GFF4361	0.15	+0.4
4,361,709	+		GFF4361	0.15	-0.5
4,361,710	+		GFF4361	0.15	+1.7
4,361,718	-		GFF4361	0.16	+0.5
4,361,722	-		GFF4361	0.17	-0.6
4,361,725	+		GFF4361	0.17	-2.2
4,361,732	-		GFF4361	0.18	-0.8
4,361,747	+		GFF4361	0.19	-0.6
4,361,748	+		GFF4361	0.20	-0.7
4,361,748	+		GFF4361	0.20	-0.7
4,361,748	+		GFF4361	0.20	-1.4
4,361,748	+		GFF4361	0.20	-0.1
4,361,748	+		GFF4361	0.20	-0.2
4,361,748	+		GFF4361	0.20	-1.6
4,361,748	+		GFF4361	0.20	-0.6
4,361,751	-		GFF4361	0.20	-0.5
4,361,755	-		GFF4361	0.20	-0.5
4,361,756	-		GFF4361	0.20	+0.5
4,361,756	-		GFF4361	0.20	-1.1
4,361,756	-		GFF4361	0.20	-1.7
4,361,756	-		GFF4361	0.20	+0.3
4,361,759	+		GFF4361	0.21	-1.1
4,361,763	+		GFF4361	0.21	+0.6
4,361,767	-		GFF4361	0.22	-0.5
4,361,792	+		GFF4361	0.24	+1.4
4,361,792	+		GFF4361	0.24	+0.9
4,361,792	+		GFF4361	0.24	+0.1
4,361,792	-		GFF4361	0.24	+0.1
4,361,797	+		GFF4361	0.25	+1.2
4,361,800	-		GFF4361	0.25	-1.5
4,361,800	-		GFF4361	0.25	-1.5
4,361,805	-		GFF4361	0.26	+0.5
4,361,805	-		GFF4361	0.26	-0.0
4,361,807	+		GFF4361	0.26	+1.4
4,361,807	+		GFF4361	0.26	-0.8
4,361,815	-		GFF4361	0.27	-1.1
4,361,915	+		GFF4361	0.38	-0.8
4,361,928	-		GFF4361	0.40	+0.4
4,361,928	-		GFF4361	0.40	-1.5
4,361,947	+		GFF4361	0.42	-1.9
4,361,947	+		GFF4361	0.42	+0.3
4,361,962	-		GFF4361	0.44	-0.9
4,361,964	+		GFF4361	0.44	-0.6
4,361,964	+		GFF4361	0.44	-1.6
4,361,970	-		GFF4361	0.44	+0.7
4,361,972	-		GFF4361	0.45	-0.4
4,361,972	-		GFF4361	0.45	-0.6
4,361,972	-		GFF4361	0.45	-1.7
4,361,978	-		GFF4361	0.45	-1.6
4,361,987	+		GFF4361	0.46	+0.8
4,361,987	+		GFF4361	0.46	-0.7
4,361,995	-		GFF4361	0.47	+0.0
4,361,995	-		GFF4361	0.47	-0.6
4,361,997	+		GFF4361	0.47	+0.7
4,362,011	+		GFF4361	0.49	-0.4
4,362,020	-		GFF4361	0.50	-0.7
4,362,021	-		GFF4361	0.50	-1.9
4,362,024	+		GFF4361	0.51	-0.7
4,362,031	-		GFF4361	0.51	-2.2
4,362,037	-		GFF4361	0.52	+0.7
4,362,043	+		GFF4361	0.53	-0.1
4,362,050	+		GFF4361	0.53	-1.2
4,362,051	+		GFF4361	0.54	-1.6
4,362,051	+		GFF4361	0.54	+0.3
4,362,059	-		GFF4361	0.54	-0.6
4,362,059	-		GFF4361	0.54	+0.0
4,362,059	-		GFF4361	0.54	-0.1
4,362,059	-		GFF4361	0.54	-0.7
4,362,059	-		GFF4361	0.54	-0.6
4,362,059	-		GFF4361	0.54	+1.0
4,362,082	+		GFF4361	0.57	+0.3
4,362,084	-		GFF4361	0.57	-2.7
4,362,089	-		GFF4361	0.58	-0.2
4,362,089	-		GFF4361	0.58	-1.2
4,362,099	-		GFF4361	0.59	+0.4
4,362,119	+		GFF4361	0.61	+0.4
4,362,127	-		GFF4361	0.62	+1.0
4,362,129	+		GFF4361	0.62	+0.5
4,362,137	-		GFF4361	0.63	-0.8
4,362,138	-		GFF4361	0.63	+0.3
4,362,140	+		GFF4361	0.64	+0.9
4,362,152	+		GFF4361	0.65	+0.6
4,362,152	+		GFF4361	0.65	-0.5
4,362,152	+		GFF4361	0.65	+0.7
4,362,160	+		GFF4361	0.66	+0.2
4,362,160	+		GFF4361	0.66	-1.1
4,362,162	+		GFF4361	0.66	+0.0
4,362,162	+		GFF4361	0.66	-0.7
4,362,162	+		GFF4361	0.66	-0.9
4,362,168	-		GFF4361	0.67	-2.4
4,362,170	-		GFF4361	0.67	+0.4
4,362,170	-		GFF4361	0.67	-1.8
4,362,170	-		GFF4361	0.67	+0.4
4,362,170	-		GFF4361	0.67	+0.4
4,362,180	-		GFF4361	0.68	+0.7
4,362,198	-		GFF4361	0.70	-0.9
4,362,207	-		GFF4361	0.71	-1.5
4,362,222	+		GFF4361	0.73	-0.2
4,362,222	+		GFF4361	0.73	-0.1
4,362,222	+		GFF4361	0.73	+0.4
4,362,222	+		GFF4361	0.73	-1.0
4,362,230	-		GFF4361	0.74	-0.9
4,362,245	-		GFF4361	0.75	-1.2
4,362,251	+		GFF4361	0.76	-0.7
4,362,251	+		GFF4361	0.76	+0.3
4,362,251	+		GFF4361	0.76	-0.9
4,362,259	-		GFF4361	0.77	-0.0
4,362,272	+		GFF4361	0.78	-2.5
4,362,273	+		GFF4361	0.78	+0.4
4,362,276	-		GFF4361	0.79	-0.3
4,362,290	+		GFF4361	0.80	+0.7
4,362,290	+		GFF4361	0.80	-2.8
4,362,298	-		GFF4361	0.81	-0.0
4,362,329	-		GFF4361	0.85	-0.7
4,362,340	+		GFF4361	0.86	-0.6
4,362,342	+		GFF4361	0.86	+0.7
4,362,380	-				+0.7
4,362,418	+				-0.5
4,362,420	-				+0.7
4,362,436	+				-0.5
4,362,441	+				-0.1
4,362,441	+				-0.0
4,362,441	+				+0.7
4,362,441	+				-1.2
4,362,441	+				-0.7
4,362,441	+				-0.1
4,362,446	+				-0.1
4,362,446	+				+0.6
4,362,447	+				-1.5
4,362,447	+				-0.7
4,362,449	-				+0.3
4,362,449	-				+0.4
4,362,449	-				+0.3
4,362,449	-				-0.9
4,362,449	-				-1.5
4,362,449	-				+0.4
4,362,449	-				+0.6
4,362,449	-				-3.1
4,362,455	-				+1.0
4,362,455	-				+1.7
4,362,455	-				-0.3
4,362,455	-				-1.9
4,362,491	+		GFF4362	0.22	+1.0
4,362,499	-		GFF4362	0.28	-0.6
4,362,499	-		GFF4362	0.28	-1.0
4,362,499	-		GFF4362	0.28	-0.1
4,362,503	+		GFF4362	0.31	-1.6
4,362,525	+		GFF4362	0.47	-1.0
4,362,537	-		GFF4362	0.56	+0.5
4,362,544	+		GFF4362	0.61	-2.0
4,362,562	+		GFF4362	0.75	+0.4
4,362,562	+		GFF4362	0.75	+0.3
4,362,562	+		GFF4362	0.75	+0.4
4,362,570	-		GFF4362	0.81	+0.6
4,362,573	+		GFF4362	0.83	+0.9
4,362,591	-				-0.6
4,362,596	+				-0.5
4,362,599	+				-0.8
4,362,604	-				+0.6
4,362,635	+				+0.1
4,362,635	+				+0.1
4,362,636	+				+0.0
4,362,636	+				-0.4
4,362,636	+				-0.9
4,362,636	+				-2.2
4,362,636	+				+0.3
4,362,636	+				-0.6
4,362,636	+				+0.4
4,362,636	+				-0.5
4,362,644	-				-0.3
4,362,644	-				+0.4
4,362,644	-				+1.7
4,362,644	-				-0.3
4,362,644	-				+0.1
4,362,644	-				-2.3
4,362,644	-				-0.6
4,362,644	-				+1.0
4,362,644	-				-0.1
4,362,644	-				-1.7
4,362,644	-				-0.8
4,362,644	-				+0.1
4,362,655	+				-0.5
4,362,676	+				-0.5
4,362,682	+				-0.4
4,362,690	-				-0.7
4,362,718	+				+1.0
4,362,730	+				-0.9
4,362,730	+				-0.9
4,362,730	+				-0.2
4,362,730	+				-0.7
4,362,738	-				-1.6
4,362,745	-				-0.1
4,362,751	+				-0.1
4,362,752	-				+0.5
4,362,759	-				-0.6
4,362,803	-				-0.3
4,362,804	+				+0.4
4,362,841	+				-0.7
4,362,860	-				+0.5
4,362,860	-				-1.0
4,362,870	+				-0.2
4,362,874	+				-0.5
4,362,874	-				-0.7
4,362,875	+				+0.1
4,362,875	+				-0.5
4,362,876	+				-0.0
4,362,876	+				+0.4
4,362,876	+				+0.3
4,362,882	-				-0.1
4,362,883	-				-0.8
4,362,886	+				-0.3
4,362,932	-				-1.1
4,362,934	-				+0.1
4,362,942	-				-0.7
4,362,963	+				+0.2
4,362,963	+				-0.4
4,362,963	+				-0.4
4,362,963	+				-3.5
4,362,971	-				-0.2
4,362,971	-				-0.1
4,362,971	-				+1.7
4,362,971	-				+0.6
4,362,972	+				+0.5
4,362,985	-				-0.9
4,362,990	+				-0.4
4,362,990	+				-2.2
4,362,990	+				-1.6
4,362,998	-				-0.7
4,363,003	+				-0.4
4,363,024	+				-1.1
4,363,024	+				+0.4
4,363,024	+				-0.3
4,363,024	+				-1.5
4,363,024	+				-1.7
4,363,024	+				+0.9
4,363,025	-				+0.1
4,363,031	+				-0.1
4,363,031	+				-1.0
4,363,039	-				-1.0
4,363,046	-				-0.2
4,363,431	+				+0.2
4,363,431	+				-0.2
4,363,467	+				+0.1
4,363,485	+				+1.1
4,363,485	+				-0.2
4,363,485	+				-0.0
4,363,485	+				+1.9
4,363,485	+				+1.5
4,363,485	+				-0.7
4,363,485	+				-1.8
4,363,485	+				+0.6
4,363,485	+				-0.7
4,363,485	+				-0.2
4,363,485	+				-2.0
4,363,485	+				+0.2
4,363,485	+				+0.1
4,363,485	+				+0.7
4,363,490	+				+0.0
4,363,493	-				-1.9
4,363,493	-				-2.5
4,363,493	-				+0.1
4,363,493	-				-0.1
4,363,493	-				-0.1
4,363,493	-				-0.3
4,363,493	-				-2.9
4,363,493	-				+0.4
4,363,493	-				+0.5
4,363,493	-				-0.6
4,363,509	-				-0.6
4,363,513	-				-0.8
4,363,527	+				+0.7
4,363,527	+				-0.8
4,363,527	+				-0.9
4,363,527	+				+0.7
4,363,532	+				+0.7
4,363,535	+				-1.1
4,363,535	-				-1.9
4,363,535	-				+0.3
4,363,535	-				-1.2
4,363,535	-				-0.3
4,363,535	-				+0.0
4,363,535	-				-1.3
4,363,561	-				-0.1
4,363,561	-				-1.8
4,363,561	-				-0.6
4,363,561	-				-1.0
4,363,561	-				-1.9
4,363,563	+				-1.2
4,363,568	+				-0.4
4,363,570	+				-1.0
4,363,570	+				+0.3
4,363,571	-				-0.3