Strain Fitness in Sphingobium sp. HT1-2 around GFF4196

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,218,694	+		GFF4195	0.18	-0.0
4,218,694	+		GFF4195	0.18	-0.6
4,218,694	+		GFF4195	0.18	-0.1
4,218,706	+		GFF4195	0.19	+0.3
4,218,715	+		GFF4195	0.20	+0.2
4,218,725	+		GFF4195	0.21	-1.6
4,218,725	+		GFF4195	0.21	+0.3
4,218,733	-		GFF4195	0.21	-0.8
4,218,733	-		GFF4195	0.21	-0.5
4,218,807	+		GFF4195	0.27	-0.1
4,218,807	+		GFF4195	0.27	+0.7
4,218,807	+		GFF4195	0.27	-1.5
4,218,815	-		GFF4195	0.28	-1.0
4,218,815	-		GFF4195	0.28	+0.8
4,218,815	-		GFF4195	0.28	-0.7
4,218,827	+		GFF4195	0.29	-1.3
4,218,832	+		GFF4195	0.30	-0.3
4,218,832	+		GFF4195	0.30	-2.1
4,218,838	+		GFF4195	0.30	+0.7
4,218,842	+		GFF4195	0.30	-1.1
4,218,857	+		GFF4195	0.32	-1.2
4,218,857	+		GFF4195	0.32	+0.5
4,218,901	+		GFF4195	0.35	-0.9
4,218,901	+		GFF4195	0.35	-2.4
4,218,952	-		GFF4195	0.39	-0.5
4,218,965	-		GFF4195	0.41	+0.1
4,218,970	+		GFF4195	0.41	-0.0
4,218,978	-		GFF4195	0.42	-1.8
4,219,035	+		GFF4195	0.46	+0.1
4,219,045	+		GFF4195	0.47	-1.4
4,219,057	-		GFF4195	0.48	+1.1
4,219,057	-		GFF4195	0.48	-1.0
4,219,079	+		GFF4195	0.50	+0.2
4,219,082	+		GFF4195	0.50	+0.1
4,219,082	+		GFF4195	0.50	-1.5
4,219,082	+		GFF4195	0.50	+0.5
4,219,082	+		GFF4195	0.50	-1.2
4,219,088	+		GFF4195	0.51	-0.5
4,219,088	+		GFF4195	0.51	-0.2
4,219,089	-		GFF4195	0.51	+0.7
4,219,090	-		GFF4195	0.51	-0.3
4,219,096	-		GFF4195	0.51	-1.7
4,219,102	-		GFF4195	0.52	+0.8
4,219,104	+		GFF4195	0.52	-1.7
4,219,104	+		GFF4195	0.52	-1.8
4,219,104	+		GFF4195	0.52	+0.4
4,219,104	+		GFF4195	0.52	+0.7
4,219,104	+		GFF4195	0.52	-0.0
4,219,104	+		GFF4195	0.52	-1.6
4,219,104	+		GFF4195	0.52	-1.3
4,219,104	+		GFF4195	0.52	-0.5
4,219,104	+		GFF4195	0.52	-2.3
4,219,104	+		GFF4195	0.52	-0.4
4,219,104	+		GFF4195	0.52	-0.5
4,219,112	-		GFF4195	0.53	-0.9
4,219,112	-		GFF4195	0.53	-0.4
4,219,112	-		GFF4195	0.53	-1.6
4,219,112	-		GFF4195	0.53	+0.4
4,219,112	-		GFF4195	0.53	-0.7
4,219,112	-		GFF4195	0.53	-0.2
4,219,112	-		GFF4195	0.53	-2.5
4,219,115	+		GFF4195	0.53	+0.6
4,219,177	+		GFF4195	0.58	-0.4
4,219,178	+		GFF4195	0.58	+0.5
4,219,178	+		GFF4195	0.58	+0.5
4,219,178	+		GFF4195	0.58	+0.7
4,219,178	+		GFF4195	0.58	-2.1
4,219,178	+		GFF4195	0.58	+1.1
4,219,178	+		GFF4195	0.58	+0.1
4,219,183	+		GFF4195	0.59	-0.9
4,219,183	+		GFF4195	0.59	-2.0
4,219,183	+		GFF4195	0.59	-1.5
4,219,183	+		GFF4195	0.59	+0.3
4,219,183	+		GFF4195	0.59	+0.3
4,219,183	+		GFF4195	0.59	-1.0
4,219,183	+		GFF4195	0.59	+0.1
4,219,183	+		GFF4195	0.59	+1.1
4,219,185	+		GFF4195	0.59	-0.5
4,219,186	-		GFF4195	0.59	+0.5
4,219,186	-		GFF4195	0.59	-2.8
4,219,188	+		GFF4195	0.59	-0.5
4,219,188	+		GFF4195	0.59	+0.3
4,219,188	+		GFF4195	0.59	+0.1
4,219,188	+		GFF4195	0.59	+0.1
4,219,188	+		GFF4195	0.59	-1.0
4,219,188	+		GFF4195	0.59	-0.1
4,219,191	-		GFF4195	0.59	-0.5
4,219,191	-		GFF4195	0.59	-1.3
4,219,191	-		GFF4195	0.59	-2.1
4,219,191	-		GFF4195	0.59	-2.2
4,219,191	-		GFF4195	0.59	+0.1
4,219,191	-		GFF4195	0.59	-0.5
4,219,193	+		GFF4195	0.59	-1.2
4,219,193	+		GFF4195	0.59	+0.3
4,219,257	+		GFF4195	0.65	+0.2
4,219,262	+		GFF4195	0.65	-0.3
4,219,262	+		GFF4195	0.65	+1.2
4,219,307	-		GFF4195	0.69	+0.4
4,219,338	+		GFF4195	0.71	-0.2
4,219,338	+		GFF4195	0.71	-0.1
4,219,346	-		GFF4195	0.72	-0.0
4,219,347	-		GFF4195	0.72	-1.0
4,219,357	-		GFF4195	0.73	+0.6
4,219,368	+		GFF4195	0.74	-0.0
4,219,370	+		GFF4195	0.74	+0.5
4,219,378	-		GFF4195	0.75	-0.6
4,219,393	+		GFF4195	0.76	+0.1
4,219,393	+		GFF4195	0.76	-0.4
4,219,393	+		GFF4195	0.76	+0.7
4,219,401	-		GFF4195	0.77	-0.9
4,219,401	-		GFF4195	0.77	-0.5
4,219,401	-		GFF4195	0.77	+0.5
4,219,403	+		GFF4195	0.77	-0.1
4,219,408	+		GFF4195	0.77	+1.2
4,219,408	+		GFF4195	0.77	-0.4
4,219,408	+		GFF4195	0.77	-0.4
4,219,413	+		GFF4195	0.78	-0.1
4,219,414	+		GFF4195	0.78	+0.4
4,219,416	-		GFF4195	0.78	-0.2
4,219,416	-		GFF4195	0.78	-0.9
4,219,432	+		GFF4195	0.79	-2.1
4,219,432	+		GFF4195	0.79	-1.8
4,219,432	+		GFF4195	0.79	-1.3
4,219,442	+		GFF4195	0.80	-1.5
4,219,450	-		GFF4195	0.81	-1.4
4,219,450	-		GFF4195	0.81	-0.9
4,219,450	-		GFF4195	0.81	+0.3
4,219,459	+		GFF4195	0.81	+0.7
4,219,463	+		GFF4195	0.82	-0.1
4,219,533	+		GFF4195	0.88	-0.5
4,219,533	+		GFF4195	0.88	-1.3
4,219,543	+		GFF4195	0.88	+0.1
4,219,551	+		GFF4195	0.89	-2.5
4,219,552	-		GFF4195	0.89	+0.5
4,219,552	-		GFF4195	0.89	-1.7
4,219,560	-		GFF4195	0.90	-0.3
4,219,569	+				-1.8
4,219,574	+				-0.1
4,219,574	+				-0.0
4,219,574	+				-0.3
4,219,574	+				-0.3
4,219,574	+				-0.9
4,219,574	+				+0.9
4,219,574	+				-0.0
4,219,574	+				-0.8
4,219,574	+				-0.5
4,219,574	+				-2.4
4,219,574	+				+0.7
4,219,574	+				-0.0
4,219,582	-				+0.1
4,219,582	-				-0.6
4,219,582	-				-0.6
4,219,582	-				-0.5
4,219,582	-				-0.8
4,219,582	-				-0.6
4,219,582	-				+0.9
4,219,582	-				-1.5
4,219,582	-				-0.1
4,219,582	-				+0.9
4,219,582	-				-0.9
4,219,582	-				+0.2
4,219,582	-				+0.6
4,219,582	-				+0.3
4,219,582	-				-1.9
4,219,582	-				-0.1
4,219,582	-				+0.7
4,219,582	-				+0.2
4,219,582	-				+0.8
4,219,582	-				-0.1
4,219,582	-				+2.3
4,219,582	-				-0.4
4,219,582	-				-1.1
4,219,582	-				-1.8
4,219,582	-				+0.3
4,219,582	-				-0.4
4,219,582	-				-1.6
4,219,582	-				-0.1
4,219,595	+				-0.9
4,219,601	-				+0.2
4,219,603	-				-0.8
4,219,608	-				-0.2
4,219,637	+				-0.5
4,219,637	+				+0.5
4,219,637	+				-0.3
4,219,637	+				-0.4
4,219,637	+				-0.0
4,219,645	-				-0.7
4,219,645	-				-1.2
4,219,645	-				+0.1
4,219,648	+				-0.8
4,219,660	+				-0.3
4,219,662	+				-0.5
4,219,672	+				+0.1
4,219,672	+				+0.3
4,219,672	+				-1.3
4,219,677	+				-0.9
4,219,677	+				-2.3
4,219,677	+				+0.2
4,219,677	+				-0.0
4,219,677	+				-0.1
4,219,677	+				-0.6
4,219,677	+				+0.2
4,219,677	+				+0.3
4,219,677	+				+0.6
4,219,677	+				+0.5
4,219,677	+				+0.1
4,219,677	+				+1.2
4,219,677	+				-0.0
4,219,677	+				+0.1
4,219,677	+				-0.3
4,219,678	-				-0.7
4,219,682	+				+1.0
4,219,685	-				-1.0
4,219,685	-				+0.9
4,219,685	-				+1.0
4,219,685	-				-0.7
4,219,685	-				-0.2
4,219,685	-				-0.0
4,219,685	-				-1.3
4,219,685	-				+0.2
4,219,685	-				-0.8
4,219,685	-				-0.8
4,219,685	-				-0.3
4,219,690	+				+0.4
4,219,690	-				-0.4
4,219,690	-				-3.1
4,219,690	-				+0.3
4,219,700	-				-0.6
4,219,719	+		GFF4196	0.12	-0.6
4,219,719	+		GFF4196	0.12	-1.7
4,219,719	-		GFF4196	0.12	-1.3
4,219,723	+		GFF4196	0.13	-0.4
4,219,739	+		GFF4196	0.16	+0.7
4,219,744	+		GFF4196	0.17	-0.9
4,219,757	+		GFF4196	0.19	-1.0
4,219,757	+		GFF4196	0.19	+0.9
4,219,772	+		GFF4196	0.22	+0.1
4,219,772	+		GFF4196	0.22	+0.1
4,219,780	+		GFF4196	0.23	+1.3
4,219,780	+		GFF4196	0.23	+1.5
4,219,785	-		GFF4196	0.24	+0.7
4,219,785	-		GFF4196	0.24	-0.5
4,219,805	+		GFF4196	0.28	-0.3
4,219,810	+		GFF4196	0.29	+0.3
4,219,818	-		GFF4196	0.30	+0.5
4,219,820	+		GFF4196	0.30	+0.3
4,219,825	+		GFF4196	0.31	-1.3
4,219,863	+		GFF4196	0.38	-0.5
4,219,870	-		GFF4196	0.39	-0.3
4,219,889	-		GFF4196	0.43	-1.9
4,219,894	+		GFF4196	0.44	-1.1
4,219,904	+		GFF4196	0.46	+0.4
4,219,904	+		GFF4196	0.46	-0.2
4,219,904	+		GFF4196	0.46	-0.1
4,219,904	+		GFF4196	0.46	-1.0
4,219,907	-		GFF4196	0.46	-1.9
4,219,913	+		GFF4196	0.47	-0.3
4,219,921	-		GFF4196	0.49	-0.0
4,219,927	+		GFF4196	0.50	+1.9
4,219,927	+		GFF4196	0.50	+0.4
4,219,927	+		GFF4196	0.50	-1.9
4,219,928	-		GFF4196	0.50	-1.6
4,219,933	+		GFF4196	0.51	-1.2
4,219,935	-		GFF4196	0.51	-0.1
4,219,935	-		GFF4196	0.51	-0.5
4,219,935	-		GFF4196	0.51	-0.8
4,219,935	-		GFF4196	0.51	-0.3
4,219,935	-		GFF4196	0.51	+0.1
4,219,936	-		GFF4196	0.51	-0.6
4,219,940	+		GFF4196	0.52	-1.8
4,219,942	-		GFF4196	0.53	-0.1
4,219,986	+		GFF4196	0.61	-0.1
4,219,986	-		GFF4196	0.61	-2.4
4,219,994	-		GFF4196	0.62	+0.2
4,219,996	+		GFF4196	0.62	+0.8
4,219,996	+		GFF4196	0.62	-0.9
4,219,996	+		GFF4196	0.62	-0.2
4,220,004	-		GFF4196	0.64	-0.3
4,220,004	-		GFF4196	0.64	-0.4
4,220,008	-		GFF4196	0.64	+0.4
4,220,008	-		GFF4196	0.64	+0.1
4,220,030	+		GFF4196	0.68	+0.0
4,220,033	-		GFF4196	0.69	+0.9
4,220,069	-		GFF4196	0.76	-0.7
4,220,069	-		GFF4196	0.76	-0.2
4,220,074	-		GFF4196	0.76	-0.8
4,220,075	+		GFF4196	0.77	+0.1
4,220,075	+		GFF4196	0.77	-0.1
4,220,075	+		GFF4196	0.77	-2.4
4,220,079	-		GFF4196	0.77	-0.3
4,220,104	+		GFF4196	0.82	-0.9
4,220,104	+		GFF4196	0.82	+0.4
4,220,104	+		GFF4196	0.82	+0.6
4,220,104	+		GFF4196	0.82	+0.3
4,220,104	+		GFF4196	0.82	+0.4
4,220,112	-		GFF4196	0.83	+0.1
4,220,112	-		GFF4196	0.83	-0.1
4,220,112	-		GFF4196	0.83	+0.7
4,220,112	-		GFF4196	0.83	-0.2
4,220,116	+		GFF4196	0.84	+0.1
4,220,145	+		GFF4196	0.89	+1.5
4,220,145	+		GFF4196	0.89	-1.7
4,220,150	+				-0.7
4,220,150	+				-0.0
4,220,150	+				+0.1
4,220,150	+				+0.0
4,220,150	+				+1.3
4,220,150	+				-0.6
4,220,150	+				-2.3
4,220,150	+				+1.3
4,220,150	+				+1.3
4,220,150	+				+0.6
4,220,150	+				-1.9
4,220,150	+				-0.5
4,220,150	+				-1.8
4,220,150	+				-0.7
4,220,150	+				-1.3
4,220,150	+				+0.8
4,220,150	+				-1.1
4,220,150	+				+0.1
4,220,150	+				-0.3
4,220,150	+				-0.1
4,220,150	+				+0.5
4,220,150	+				-0.4
4,220,150	+				-0.2
4,220,150	+				+0.2
4,220,150	+				-0.1
4,220,154	-				-0.2
4,220,155	+				-0.7
4,220,158	-				-0.5
4,220,158	-				-0.0
4,220,158	-				+0.2
4,220,158	-				-0.5
4,220,158	-				+0.7
4,220,158	-				+1.2
4,220,158	-				-0.5
4,220,158	-				-1.9
4,220,158	-				+1.1
4,220,158	-				-0.6
4,220,158	-				+0.4
4,220,158	-				+0.5
4,220,158	-				-0.5
4,220,158	-				+0.6
4,220,159	-				+0.8
4,220,159	-				+0.8
4,220,163	-				+0.1
4,220,164	+				+0.7
4,220,170	-				-0.0
4,220,181	+				-0.2
4,220,206	-				-1.3
4,220,210	-				-0.2
4,220,226	-				+0.2
4,220,245	-				-0.5
4,220,250	+				+1.0
4,220,256	-				-0.2
4,220,258	+				-0.7
4,220,258	+				-2.0
4,220,273	-				+1.2
4,220,277	-				+0.3
4,220,302	-				+0.7
4,220,304	+				-2.1
4,220,304	+				+1.1
4,220,304	+				-0.5
4,220,304	+				-0.2
4,220,309	+				+1.6
4,220,309	+				-0.2
4,220,312	-				-1.9
4,220,312	-				-1.5
4,220,312	-				+0.3
4,220,312	-				-0.9
4,220,312	-				-0.4
4,220,312	-				+1.2
4,220,314	+				-1.6
4,220,317	-				+0.3
4,220,317	-				+1.5
4,220,324	-				+0.8
4,220,336	-				+0.6
4,220,377	+				+0.5
4,220,379	+				+0.1
4,220,379	+				-0.1
4,220,387	-				-0.7
4,220,387	-				-2.1
4,220,387	-				-0.1
4,220,388	+				+1.1
4,220,397	-				-1.7
4,220,408	+		GFF4197	0.11	-0.6
4,220,416	-		GFF4197	0.12	-0.8
4,220,422	+		GFF4197	0.12	-0.2
4,220,430	-		GFF4197	0.13	-0.3
4,220,449	-		GFF4197	0.15	+1.2
4,220,476	-		GFF4197	0.17	+0.3
4,220,485	-		GFF4197	0.18	+0.4
4,220,503	-		GFF4197	0.20	-0.4
4,220,508	-		GFF4197	0.21	-1.4
4,220,519	+		GFF4197	0.22	-0.0
4,220,520	+		GFF4197	0.22	+0.7
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4,220,556	+		GFF4197	0.25	-1.3
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4,220,593	+		GFF4197	0.29	+1.0
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